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2024-05-04 01:04:30

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Organism: Onion yellows phytoplasma OY-M, onion yellows

Number of genes found: 110

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Onion yellows phytoplasma OY-M, onion yellows
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA PAM012 exopolyphosphatase-related proteinchromosome CDS13316 2574 + 0.29526
NA PAM003 hypothetical proteinchromosome CDS4447 420 + 0.228571
NA PAM103 cytosine/adenosine deaminasechromosome CDS128672 486 - 0.31893
NA PAM183 conserved hypothetical proteinchromosome CDS216815 1092 + 0.317766
NA PAM338 hypothetical proteinchromosome CDS384618 375 - 0.258667
NA PAM087 conserved hypothetical proteinchromosome CDS109844 336 + 0.279762
NA PAM412 hypothetical proteinchromosome CDS458035 318 - 0.220126
GRS1 PAM626 glycyl-tRNA synthetase, class IIchromosome CDS716670 1359 + 0.356144
alaS PAM305 alanyl-tRNA synthetasechromosome CDS347381 2595 - 0.322929
argS PAM455 arginyl-tRNA synthetasechromosome CDS512605 1674 + 0.27718
asnS PAM754 aspartyl/asparaginyl-tRNA synthetasechromosome CDS858081 1521 - 0.314924
aspS PAM128 aspartyl-tRNA synthetasechromosome CDS152425 1761 + 0.321408
cysS PAM141 cysteinyl-tRNA synthetasechromosome CDS165715 1317 + 0.287775
efp PAM276 translation elongation factor EF-Pchromosome CDS317585 570 + 0.280702
frr PAM168 ribosome recycling factorchromosome CDS199169 555 + 0.322523
fusA PAM264 translation elongation factor EF-Gchromosome CDS302934 2067 + 0.371553
glnS PAM140 glutamyl-and glutaminyl-tRNA synthetasechromosome CDS164200 1350 + 0.322963
glnS PAM620 glutamyl-and glutaminyl-tRNA synthetasechromosome CDS709398 1815 + 0.341598
hisS PAM127 histidyl-tRNA synthetasechromosome CDS151153 1269 + 0.322301
ileS PAM184 isoleucyl-tRNA synthetasechromosome CDS218019 2703 + 0.318535
infA PAM223 translation initiation factor IF-1chromosome CDS254967 237 + 0.295359
infB PAM150 translation initiation factor 2chromosome CDS176528 1860 + 0.338172
infC PAM744 translation initiation factor IF3chromosome CDS846266 453 - 0.300221
ksgA PAM731 dimethyladenosine transferasechromosome CDS832877 807 + 0.263941
ksgA PAM306 dimethyladenosine transferasechromosome CDS350438 1368 + 0.271199
leuS PAM738 leucyl-tRNA synthetasechromosome CDS840400 2466 - 0.328467
lysU PAM589 lysyl-tRNA synthetase class IIchromosome CDS670622 1536 + 0.336589
map PAM222 methionine aminopeptidasechromosome CDS254148 744 + 0.34543
metG PAM233 methionyl-tRNA synthetasechromosome CDS261149 1563 + 0.325016
miaA PAM275 tRNA delta(2)-isopentenylpyrophosphate transferasechromosome CDS316651 876 + 0.295662
pcnB PAM102 tRNA nucleotidyltransferase/polyA polymerasechromosome CDS127074 1239 - 0.297014
pheS PAM596 phenylalanyl-tRNA synthetase alpha subunitchromosome CDS680030 1035 + 0.336232
pheT PAM598 phenylalanyl-tRNA synthetase beta subunitchromosome CDS681568 1929 + 0.313634
pnp PAM251 polyribonucleotide nucleotidyltransferasechromosome CDS284635 2148 + 0.358007
prfA PAM014 protein chain release factor Achromosome CDS17300 1056 + 0.324811
prfB PAM473 protein chain release factor Bchromosome CDS536618 1110 - 0.297297
proS PAM246 prolyl-tRNA synthetasechromosome CDS274923 1425 + 0.337544
pth PAM152 peptidyl-tRNA hydrolasechromosome CDS179034 567 + 0.268078
rbfA PAM151 ribosome-binding factor Achromosome CDS178391 342 + 0.24269
rluA PAM131 pseudouridylate synthaseschromosome CDS157887 912 + 0.320175
rnpA PAM248 ribonuclease Pchromosome CDS276812 426 + 0.260563
rplA PAM257 ribosomal protein L1chromosome CDS292157 726 + 0.338843
rplB PAM203 ribosomal protein L2chromosome CDS244862 831 + 0.386282
rplC PAM200 ribosomal protein L3chromosome CDS243429 474 + 0.35865
rplD PAM201 ribosomal protein L4chromosome CDS243889 624 + 0.352564
rplE PAM212 ribosomal protein L5chromosome CDS248866 546 + 0.342491
rplF PAM215 ribosomal protein L6chromosome CDS250156 555 + 0.351351
rplJ PAM258 ribosomal protein L10chromosome CDS292922 510 + 0.319608
rplK PAM256 ribosomal protein L11chromosome CDS291671 426 + 0.35446
rplL PAM259 ribosomal protein L7/L12chromosome CDS293443 411 + 0.333333
rplM PAM142 ribosomal protein L13chromosome CDS167203 1641 + 0.279707
rplM PAM138 ribosomal protein L13chromosome CDS163245 459 + 0.342048
rplN PAM210 ribosomal protein L14chromosome CDS248127 363 + 0.330579
rplO PAM219 ribosomal protein L15chromosome CDS251855 381 + 0.364829
rplP PAM207 ribosomal protein L16/L10Echromosome CDS247112 423 + 0.368794
rplQ PAM228 ribosomal protein L17chromosome CDS257206 357 + 0.308123
rplR PAM216 ribosomal protein L18chromosome CDS250720 354 + 0.367232
rplS PAM470 ribosomal protein L19chromosome CDS534718 357 - 0.330532
rplT PAM742 ribosomal protein L20chromosome CDS845289 624 - 0.338141
rplU PAM086 ribosomal protein L21chromosome CDS109503 336 + 0.330357
rplV PAM205 ribosomal protein L22chromosome CDS246003 390 + 0.34359
rplW PAM202 ribosomal protein L23chromosome CDS244512 291 + 0.281787
rplX PAM211 ribosomal protein L24chromosome CDS248611 240 + 0.354167
rpmA PAM088 ribosomal protein L27chromosome CDS110181 279 + 0.351254
rpmB PAM106 ribosomal protein L28chromosome CDS130471 189 - 0.365079
rpmC PAM208 ribosomal protein L29chromosome CDS247531 321 + 0.342679
rpmD PAM218 ribosomal protein L30/L7Echromosome CDS251600 198 + 0.308081
rpmE PAM105 ribosomal protein L31chromosome CDS129965 282 - 0.35461
rpmF PAM198 ribosomal protein L32chromosome CDS241162 207 + 0.323671
rpmG PAM244 ribosomal protein L33chromosome CDS272498 150 + 0.28
rpmG PAM253 ribosomal protein L33chromosome CDS290245 186 + 0.27957
rpmH PAM247 ribosomal protein L34chromosome CDS276574 135 + 0.355556
rpmI PAM743 ribosomal protein L35chromosome CDS845927 207 - 0.318841
rpmJ PAM224 ribosomal protein L36chromosome CDS255216 117 + 0.316239
rpsB PAM165 ribosomal protein S2chromosome CDS196610 816 + 0.349265
rpsC PAM206 ribosomal protein S3chromosome CDS246376 759 + 0.362319
rpsD PAM586 ribosomal protein S4 and related proteinchromosome CDS665484 450 - 0.297778
rpsE PAM217 ribosomal protein S5chromosome CDS251088 516 + 0.339147
rpsF PAM009 ribosomal protein S6chromosome CDS12171 339 + 0.262537
rpsG PAM263 ribosomal protein S7chromosome CDS302439 471 + 0.356688
rpsH PAM214 ribosomal protein S8chromosome CDS249717 393 + 0.340967
rpsI PAM139 ribosomal protein S9chromosome CDS163708 393 + 0.358779
rpsJ PAM199 ribosomal protein S10chromosome CDS242717 324 + 0.296296
rpsK PAM226 ribosomal protein S11chromosome CDS255752 387 + 0.405685
rpsL PAM262 ribosomal protein S12chromosome CDS301931 420 + 0.4
rpsM PAM225 ribosomal protein S13chromosome CDS255345 366 + 0.333333
rpsN PAM213 ribosomal protein S14chromosome CDS249426 270 + 0.359259
rpsO PAM136 ribosomal protein S15P/S13Echromosome CDS161971 225 + 0.28
rpsP PAM472 ribosomal protein S16chromosome CDS535904 264 - 0.287879
rpsQ PAM209 ribosomal protein S17chromosome CDS247851 264 + 0.310606
rpsR PAM011 ribosomal protein S18chromosome CDS13006 240 + 0.279167
rpsS PAM204 ribosomal protein S19chromosome CDS245705 282 + 0.343972
rpsT PAM081 ribosomal protein S20chromosome CDS105231 261 + 0.272031
rpsU PAM623 ribosomal protein S21chromosome CDS714724 174 + 0.356322
rsuA PAM238 16S rRNA pseudouridylate synthasechromosome CDS266482 738 + 0.303523
serS PAM083 seryl-tRNA synthetasechromosome CDS106430 1275 + 0.323137
spoU PAM144 rRNA methylasechromosome CDS170667 705 + 0.302128
srmB PAM714 superfamily II DNA and RNA helicasechromosome CDS814483 1659 + 0.303195
srmB PAM453 superfamily II DNA and RNA helicasechromosome CDS509237 1074 + 0.285847
sua5 PAM015 translation factorchromosome CDS18448 558 + 0.292115
thrS PAM745 threonyl-tRNA synthetasechromosome CDS847449 927 - 0.350593
trmD PAM471 tRNA-(guanine-N1)-methyltransferasechromosome CDS535116 729 - 0.304527
trmU PAM125 tRNA(5-methylaminomethyl-2-thiouridylate)methylt ransferasechromosome CDS147401 1137 + 0.328936
trpS PAM466 tryptophanyl-tRNA synthetasechromosome CDS530461 1038 + 0.280347
truA PAM229 pseudouridylate synthasechromosome CDS257734 732 + 0.300546
truB PAM237 pseudouridine synthasechromosome CDS265512 852 + 0.298122
tsf PAM166 translation elongation factor Tschromosome CDS197515 837 + 0.333333
tufB PAM265 translation elongation factor EF-Tuchromosome CDS305131 1185 + 0.374684
tyrS PAM469 tyrosyl-tRNA synthetasechromosome CDS533292 1242 - 0.282609
valS PAM018 valyl-tRNA synthetasechromosome CDS21671 2043 + 0.301517