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2024-05-08 12:05:10

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Organism: Yersinia pestis CO92, CO92

Number of genes found: 185

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Yersinia pestis CO92, CO92
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
YPO0029 conserved hypothetical proteinchromosome CDS38825 438 + 0.488584
YPO0071 putative methyltransferasechromosome CDS80447 489 - 0.490798
YPO0240 conserved hypothetical proteinchromosome CDS238588 1290 - 0.460465
YPO0245a conserved hypothetical proteinchromosome CDS243738 573 + 0.467714
YPO0290 conserved hypothetical proteinchromosome CDS291275 1080 - 0.525
YPO0293 conserved hypothetical proteinchromosome CDS294300 1062 - 0.490584
YPO0316 conserved hypothetical proteinchromosome CDS323066 1038 + 0.519268
YPO0362 putative lysyl-tRNA synthetasechromosome CDS371392 978 + 0.492843
YPO0381 putative methylasechromosome CDS397600 741 + 0.538462
YPO0400 hypothetical proteinchromosome CDS417807 537 + 0.409683
YPO0466 hypothetical proteinchromosome CDS493618 2448 - 0.35335
YPO0588 putative methyltransferasechromosome CDS636017 1188 + 0.495791
YPO0627 putative translational inhibitor proteinchromosome CDS688077 381 + 0.354331
YPO0628 putative translational inhibitor proteinchromosome CDS688742 405 + 0.511111
YPO0640 hypothetical proteinchromosome CDS697119 471 + 0.422505
YPO0884 hypothetical proteinchromosome CDS968972 261 - 0.394636
YPO1038 Conserved hypothetical proteinchromosome CDS1178545 774 + 0.48708
YPO1066 conserved hypothetical proteinchromosome CDS1209358 417 + 0.494005
YPO1104 conserved hypothetical proteinchromosome CDS1247504 351 - 0.45584
YPO1175 conserved hypothetical proteinchromosome CDS1323368 945 + 0.486772
YPO1284 putative elongation factor Pchromosome CDS1442544 573 - 0.460733
YPO1336 putative RNA methyltransferasechromosome CDS1501209 1131 + 0.521662
YPO1591 ribosomal large subunit pseudouridine synthase Cchromosome CDS1816989 963 + 0.503634
YPO1595 50S ribosomal protein L32chromosome CDS1820059 168 + 0.553571
YPO1638 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferasechromosome CDS1863725 1116 - 0.499104
YPO1640 putative pseudouridine synthasechromosome CDS1865466 627 - 0.492823
YPO1669 YjgF-family lipoproteinchromosome CDS1900110 378 - 0.417989
YPO1902 hypothetical proteinchromosome CDS2137945 582 - 0.489691
YPO1955 putative acetyltransferasechromosome CDS2220029 900 + 0.438889
YPO1996 hypothetical proteinchromosome CDS2268167 906 - 0.40287
YPO1997 putative exported proteinchromosome CDS2269863 1074 - 0.485102
YPO2010 conserved hypothetical proteinchromosome CDS2282141 1092 - 0.495421
YPO2018 putative protoporphyrinogen oxidasechromosome CDS2290317 831 + 0.535499
YPO2070 conserved hypothetical proteinchromosome CDS2349958 345 - 0.486957
YPO2212 conserved hypothetical proteinchromosome CDS2485525 621 + 0.460548
YPO2213 putative RNA pseudouridylate synthase-family proteinchromosome CDS2486570 957 + 0.513062
YPO2228 translation initiation factor SUI1 family proteinchromosome CDS2504544 327 + 0.477064
YPO2420 probable formyl transferasechromosome CDS2719869 2004 - 0.457585
YPO2750 conserved hypothetical proteinchromosome CDS3082727 933 + 0.488746
YPO2898 putative SpoU-family rRNA methylasechromosome CDS3240880 774 - 0.502584
YPO2923 putative zinc-binding proteinchromosome CDS3269085 480 - 0.554167
YPO3134 putative ribosomal proteinchromosome CDS3495495 261 + 0.467433
YPO3135 putative ribosomal protein L36chromosome CDS3495771 144 + 0.479167
YPO3261 probable amidasechromosome CDS3632668 1398 + 0.550072
YPO3279 putative sigma 54 modulation proteinchromosome CDS3660327 363 + 0.446281
YPO3398 putative glutamyl-tRNA synthetasechromosome CDS3795916 966 + 0.505176
YPO3504 conserved hypothetical proteinchromosome CDS3914946 294 + 0.438776
YPO3590 conserved hypothetical proteinchromosome CDS3998123 387 + 0.483204
YPO3655 conserved hypothetical proteinchromosome CDS4073470 966 - 0.518634
YPO3674 putative insecticidal toxinchromosome CDS4101516 3036 - 0.481225
YPO3693 hypothetical proteinchromosome CDS4127240 639 + 0.41784
alaS alanyl-tRNA synthetasechromosome CDS3683714 2628 - 0.5
alcB putative siderophore biosynthetic enzymechromosome CDS1742180 582 + 0.484536
ampM methionine aminopeptidasechromosome CDS1184138 792 - 0.488636
ansA L-asparaginase Ichromosome CDS2430044 1017 - 0.476893
ansB putative L-asparaginase II precursorchromosome CDS1563862 1038 + 0.467245
argS arginyl-tRNA synthetasechromosome CDS2323093 1731 - 0.499133
asnS asparaginyl-tRNA synthetasechromosome CDS1600525 1401 - 0.498929
aspS aspartyl-tRNA synthetasechromosome CDS2331620 1797 + 0.510295
cafA ribonuclease Gchromosome CDS4090621 1470 + 0.476871
cca tRNA nucleotidyltransferasechromosome CDS707417 1239 - 0.533495
cysS cysteinyl-tRNA synthetasechromosome CDS3428619 1386 - 0.497835
dbpA ATP-dependent RNA helicasechromosome CDS2022577 1383 + 0.501085
ddhA glucose-1-phosphate cytidylyltransferasechromosome CDS3471573 786 - 0.437659
deaD cold-shock dead-box protein Achromosome CDS3895290 1995 - 0.535338
def polypeptide deformylasechromosome CDS240943 513 - 0.452242
efp elongation factor Pchromosome CDS365600 567 + 0.485009
fmt methionyl-tRNA formyltransferasechromosome CDS239971 948 - 0.470464
frr ribosome recycling factorchromosome CDS1188144 558 + 0.47491
ftsJ ribosomal RNA large subunit methyltransferase Jchromosome CDS3914170 630 - 0.455556
fusA elongation factor Gchromosome CDS216281 2109 + 0.480797
glnS glutaminyl-tRNA synthetasechromosome CDS2956358 1668 + 0.495803
gltX glutamyl-tRNA synthetasechromosome CDS3333476 1416 + 0.492232
glyQ glycyl-tRNA synthetase alpha subunitchromosome CDS4593300 915 - 0.527869
glyS glycyl-tRNA synthetase beta subunitchromosome CDS4591221 2070 - 0.523188
gshB glutathione synthetasechromosome CDS1027196 960 + 0.491667
hisS histidyl-tRNA synthetasechromosome CDS3213416 1275 - 0.507451
holE DNA polymerase III, theta subunitchromosome CDS2029331 231 - 0.441558
hslR heat shock protein 15chromosome CDS153758 408 - 0.522059
ileS isoleucyl-tRNA synthetasechromosome CDS504735 2817 + 0.500887
infA translation initiation factor IF-1chromosome CDS1538760 219 - 0.497717
infB translation initiation factor IF2-2chromosome CDS3904146 2655 - 0.496045
infC translation initiation factor IF-3chromosome CDS2732648 552 - 0.474638
iucB putative siderophore biosynthesis protein IucBchromosome CDS1099293 951 + 0.554154
ksgA dimethyladenosine transferasechromosome CDS522965 819 - 0.47619
leuS leucyl-tRNA synthetasechromosome CDS2930913 2583 - 0.510647
ligT putative 2'-5' RNA ligasechromosome CDS3793586 576 + 0.565972
lysS lysyl-tRNA synthetasechromosome CDS971744 1518 - 0.479578
map methionine aminopeptidasechromosome CDS3723448 786 + 0.510178
miaA tRNA delta(2)-isopentenylpyrophosphate transferasechromosome CDS386887 942 + 0.511677
miaB putative tRNA-thiotransferasechromosome CDS2942788 1425 - 0.482105
pcnB poly(A) polymerasechromosome CDS3797123 1323 + 0.517007
pelY periplasmic pectate lyase precursorchromosome CDS4500698 1719 - 0.4968
pheS phenylalanyl-tRNA synthetase alpha chainchromosome CDS2730478 984 - 0.47561
pnp polyribonucleotide nucleotidyltransferasechromosome CDS3898480 2118 - 0.500944
prfA peptide chain release factor 1chromosome CDS2289235 1083 + 0.514312
prfB peptide chain release factor 2chromosome CDS973271 1099 - 0.473157
prfC peptide chain release factor 3chromosome CDS449865 1590 + 0.497484
prmA ribosomal protein L11 methyltransferasechromosome CDS4075024 882 - 0.530612
proS prolyl-tRNA synthetasechromosome CDS1210676 1719 - 0.499127
pth peptidyl-tRNA hydrolasechromosome CDS2283396 591 - 0.477157
queA S-adenosylmethionine:tRNAribosyltransferase-isom erasechromosome CDS3553831 1071 - 0.513539
rbfA ribosome-binding factor Achromosome CDS3903670 411 - 0.445255
rhlB putative DEAD-box helicasechromosome CDS4343947 1287 + 0.486402
rimJ ribosomal-protein-alanine acetyltransferasechromosome CDS2311957 585 + 0.483761
rimM 16S rRNA processing proteinchromosome CDS3673178 549 - 0.468124
rluA ribosomal large subunit pseudouridine synthase Achromosome CDS529785 621 - 0.489533
rluD ribosomal large subunit pseudouridine synthase Dchromosome CDS3658128 978 - 0.482618
rmf putative ribosome modulation factorchromosome CDS1618498 168 + 0.511905
rnd ribonuclease Dchromosome CDS2356340 1122 + 0.481283
rne ribonuclease Echromosome CDS1812749 3666 - 0.510638
rnpA ribonuclease P proteinchromosome CDS4620598 360 + 0.508333
rph ribonuclease PHchromosome CDS57519 717 + 0.51325
rplA 50S ribosomal protein L1chromosome CDS4207281 705 - 0.47234
rplB 50S ribosomal protein l2chromosome CDS223566 825 + 0.515152
rplC 50S ribosomal protein L3chromosome CDS221999 630 + 0.488889
rplD 50S ribosomal protein L4chromosome CDS222645 606 + 0.50165
rplE 50S ribosomal protein L5chromosome CDS227506 540 + 0.488889
rplF 50S ribosomal protein L6chromosome CDS228805 534 + 0.513109
rplI 50S ribosomal protein L9chromosome CDS3947900 453 - 0.494481
rplJ 50S ribosomal protein L10chromosome CDS4206419 498 - 0.493976
rplK 50S ribosomal protein L11chromosome CDS4207989 429 - 0.487179
rplL 50S ribosomal protein L7/L12chromosome CDS4205984 369 - 0.468835
rplM 50S ribosomal protein L13chromosome CDS3976050 429 - 0.496504
rplN 50S ribosomal protein L14chromosome CDS226795 372 + 0.502688
rplO 50S ribosomal protein L15chromosome CDS230405 435 + 0.510345
rplP 50S ribosomal protein L16chromosome CDS225759 411 + 0.508516
rplQ 50S ribosomal protein L17chromosome CDS234945 390 + 0.54359
rplR 50S ribosomal protein L18chromosome CDS229348 354 + 0.516949
rplS 50S ribosomal protein L19chromosome CDS3671971 348 - 0.477012
rplT 50S ribosomal protein L20chromosome CDS2731960 357 - 0.498599
rplU 50S ribosomal protein L21chromosome CDS3921900 312 - 0.455128
rplV 50S ribosomal protein L22chromosome CDS224698 333 + 0.501502
rplW 50S ribosomal protein L23chromosome CDS223247 303 + 0.485149
rplX 50S ribosomal protein L24chromosome CDS227177 315 + 0.460317
rplY 50S ribosomal protein L25chromosome CDS1420786 285 - 0.463158
rpmA 50S ribosomal protein L27chromosome CDS3921623 258 - 0.488372
rpmB 50S ribosomal protein L28chromosome CDS62680 237 + 0.506329
rpmC 50S ribosomal protein L29chromosome CDS226169 192 + 0.5
rpmD 50S ribosomal protein L30chromosome CDS230222 180 + 0.433333
rpmE 50S ribosomal protein L31chromosome CDS119972 216 + 0.490741
rpmG 50S ribosomal protein L33chromosome CDS62928 168 + 0.392857
rpmH 50S ribosomal protein L34chromosome CDS4620439 141 + 0.510638
rpmI 50S ribosomal protein L35chromosome CDS2732354 198 - 0.459596
rpmJ 50S ribosomal protein L36chromosome CDS232212 117 + 0.444444
rpsA 30S ribosomal protein S1chromosome CDS1572210 1674 + 0.479092
rpsB 30S ribosomal protein S2chromosome CDS1185364 726 + 0.477961
rpsC 30S ribosomal protein S3chromosome CDS225048 699 + 0.493562
rpsD 30S ribosomal protein S4chromosome CDS233269 621 + 0.478261
rpsE 30S ribosomal protein S5chromosome CDS229716 504 + 0.484127
rpsF 30S ribosomal protein S6chromosome CDS3948950 393 - 0.508906
rpsG 30S ribosomal protein S7chromosome CDS215717 471 + 0.47983
rpsH 30S ribosomal protein S8chromosome CDS228398 393 + 0.475827
rpsI 30S ribosomal protein S9chromosome CDS3975643 393 - 0.493639
rpsJ 30S ribosomal protein S10chromosome CDS221655 312 + 0.525641
rpsK 30S ribosomal protein S11chromosome CDS232849 390 + 0.502564
rpsM 30S ribosomal protein S13chromosome CDS232476 357 + 0.504202
rpsN 30S ribosomal protein S14chromosome CDS228059 306 + 0.513072
rpsO 30S ribosomal protein S15chromosome CDS3902305 270 - 0.485185
rpsP 30S ribosomal protein S16chromosome CDS3673748 249 - 0.502008
rpsQ 30S ribosomal protein S17chromosome CDS226360 255 + 0.466667
rpsR 30S ribosomal protein S18chromosome CDS3948392 228 - 0.473684
rpsS 30S ribosomal protein S19chromosome CDS224405 279 + 0.505376
rpsT 30S ribosomal protein S20chromosome CDS503087 264 - 0.465909
rpsU 30S ribosomal protein S21chromosome CDS703092 216 - 0.462963
rpsl 30S ribosomal protein S12chromosome CDS215246 375 + 0.506667
rsmC ribosomal RNA small subunit methyltransferase Cchromosome CDS447705 1044 - 0.521073
rsuA ribosomal small subunit pseudouridine synthase Achromosome CDS1423503 708 + 0.519774
serS seryl-tRNA synthetasechromosome CDS1552685 1293 + 0.491106
speG spermidine acetyltransferasechromosome CDS3156889 546 + 0.39011
srmB ATP-dependent RNA helicasechromosome CDS3034941 1326 - 0.505279
tgt queuine tRNA-ribosyltransferasechromosome CDS3552614 1125 - 0.490667
thrS threonyl-tRNA synthetasechromosome CDS2733203 1929 - 0.473302
trmA tRNA (uracil-5)-methyltransferasechromosome CDS4393381 1104 + 0.477355
trmD tRNA (guanine-N1)-methyltransferasechromosome CDS3672399 741 - 0.523617
trmH tRNA (guanosine-2'-O-)-methyltransferasechromosome CDS49607 693 - 0.496392
trpS tryptophanyl-tRNA synthetasechromosome CDS170958 1041 + 0.48415
truA tRNA pseudouridine synthase Achromosome CDS3100249 795 + 0.515723
truB tRNA pseudouridine synthase Bchromosome CDS3902696 975 - 0.494359
tsf elongation factor Tschromosome CDS1186217 858 + 0.480186
tufA elongation factor Tuchromosome CDS218462 1185 + 0.481857
tufA elongation factor Tuchromosome CDS4209789 1185 - 0.479325
tyrS tyrosyl-tRNA synthetasechromosome CDS2661823 1275 - 0.488627
valS valyl-tRNA synthetasechromosome CDS3848237 2898 + 0.519669
yfiF putative tRNA/rRNA methyltransferasechromosome CDS3641196 1167 - 0.533847