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2024-04-29 04:24:34

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Organism: Dehalococcoides sp. CBDB1, CBDB1

Number of genes found: 132

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Dehalococcoides sp. CBDB1, CBDB1
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA cbdbA816 putative translation factor Sua5chromosome CDS664180 642 - 0.479751
NA cbdbA767 pseudouridine synthase, RsuA familychromosome CDS626100 750 + 0.481333
NA cbdbA759 translin family proteinchromosome CDS619520 633 + 0.511848
NA cbdbA189 ATP-dependent RNA helicase, DEADchromosome CDS172497 1686 + 0.514235
NA cbdbA951 acetyltransferase, GNAT familychromosome CDS778622 876 + 0.469178
NA cbdbA58 putative GTP-binding proteinchromosome CDS37672 1104 - 0.506341
NA cbdbB36 conserved hypothetical protein,CRISP-associatedchromosome CDS1204745 618 - 0.493528
NA cbdbA919 tRNA modification enzyme, MiaB familychromosome CDS752124 1251 - 0.455635
NA cbdbA853 lysyl-tRNA synthetase-related proteinchromosome CDS696898 930 - 0.45914
NA cbdbA1128 SAM-dependent methyltransferase HemK familychromosome CDS918554 834 + 0.501199
NA cbdbA361 polyA polymerase family proteinchromosome CDS306389 1257 - 0.4821
NA cbdbA484 translation initiation factor, putative,aIF-2BIfamilychromosome CDS392280 999 - 0.518519
NA cbdbA1125 nucleotidyl transferase family proteinchromosome CDS914300 1086 + 0.491713
NA cbdbA1023 putative translation initiation inhibitorchromosome CDS826937 378 - 0.460317
NA cbdbA1040 metallo-beta-lactamase family proteinchromosome CDS841485 1407 + 0.457711
NA cbdbA1328 ribosomal large subunit pseudouridine synthase,RluD subfamilychromosome CDS1053829 903 + 0.512735
NA cbdbA1167 hypothetical proteinchromosome CDS946252 468 - 0.440171
NA cbdbA1043 RNA methyltransferase, TrmA familychromosome CDS847778 1182 + 0.472927
NA cbdbA500 glucose-1-phosphate thymidylyltransferasechromosome CDS403926 1182 + 0.48308
NA cbdbA490 acetyltransferase, GNAT familychromosome CDS396237 561 - 0.477718
NA cbdbA1426 putative ribosomal subunit interface proteinchromosome CDS1128867 540 + 0.505556
NA cbdbA1421 2'-5' RNA ligase family proteinchromosome CDS1127257 582 + 0.501718
NA cbdbB12 conserved hypothetical proteinchromosome CDS312268 288 + 0.510417
NA cbdbA275 polyA polymerase family proteinchromosome CDS241211 1497 - 0.483634
alaS cbdbA65 alanyl-tRNA synthetasechromosome CDS41966 2616 + 0.524465
argS cbdbA1196 arginyl-tRNA synthetasechromosome CDS967305 1671 + 0.491323
aspS cbdbA663 aspartyl-tRNA synthetasechromosome CDS544764 1797 + 0.489149
ctc cbdbA1419 ribosomal protein L25 (General stress protein Ctc)chromosome CDS1125743 657 + 0.47032
cysS cbdbA76 cysteinyl-tRNA synthetasechromosome CDS56546 1374 + 0.483261
def cbdbA733 polypeptide deformylasechromosome CDS600177 504 - 0.470238
dtd cbdbA23 D-tyrosyl-tRNA(Tyr) deacylasechromosome CDS18532 462 + 0.512987
efp cbdbA854 translation elongation factor Pchromosome CDS697833 567 - 0.421517
efp cbdbA670 translation elongation factor Pchromosome CDS551077 561 - 0.433155
fmt cbdbA1742 methionyl-tRNA formyltransferasechromosome CDS1394532 939 - 0.523962
frr cbdbA318 ribosome recycling factorchromosome CDS276778 558 - 0.453405
fusA cbdbA1130 translation elongation factor Gchromosome CDS919473 2061 - 0.504609
fusA cbdbA437 translation elongation factor Gchromosome CDS363866 2082 + 0.491835
gatA cbdbA1284 glutamyl-tRNA(Gln) amidotransferase, A subunitchromosome CDS1018750 1461 + 0.502396
gatB cbdbA1643 glutamyl-tRNA(Gln) amidotransferase, B subunitchromosome CDS1329345 1479 - 0.486139
gatC cbdbA1282 glutamyl-tRNA(gln) amidotransferase, C subunitchromosome CDS1018463 288 + 0.482639
gltX cbdbA1316 glutamyl-tRNA synthetasechromosome CDS1046733 1464 + 0.510246
glyS cbdbA765 glycyl-tRNA synthetasechromosome CDS623514 1302 + 0.483871
hisS cbdbA7 histidyl-tRNA synthetasechromosome CDS8331 1257 + 0.514718
hisS cbdbA829 histidyl-tRNA synthetasechromosome CDS675461 1239 - 0.48184
ileS cbdbA1012 isoleucyl-tRNA synthetasechromosome CDS818031 3045 - 0.488013
infA cbdbA461 translation initiation factor IF-1chromosome CDS377809 222 + 0.481982
infB cbdbA947 translation initiation factor IF-2chromosome CDS773384 1782 - 0.464646
infC cbdbA725 translation initiation factor IF-3chromosome CDS591192 474 - 0.457806
ksgA cbdbA355 dimethyladenosine transferasechromosome CDS302916 876 + 0.487443
leuS cbdbA202 leucyl-tRNA synthetasechromosome CDS183873 2442 - 0.510238
lysS cbdbA555 lysyl-tRNA synthetasechromosome CDS451191 1497 - 0.492318
map cbdbA460 methionine aminopeptidase, type Ichromosome CDS377044 756 + 0.493386
metG cbdbA334 methionyl-tRNA synthetasechromosome CDS288140 1662 + 0.509627
miaA cbdbA716 tRNAdelta(2)-isopentenylpyrophosphatetransferasechromosome CDS581668 987 - 0.462006
miaB cbdbA1340 tRNA-i(6)A37 thiotransferase enzyme MiaBchromosome CDS1063370 1257 - 0.480509
pheS cbdbA307 phenylalanyl-tRNA synthetase, alpha subunitchromosome CDS265893 1041 + 0.492795
pnp cbdbA932 polyribonucleotide nucleotidyltransferasechromosome CDS761182 2163 + 0.488211
prfA cbdbA1127 peptide chain release factor 1chromosome CDS917487 1068 + 0.496255
prfB cbdbA543 peptide chain release factor 2chromosome CDS443182 1071 + 0.495798
proS cbdbA310 prolyl-tRNA synthetasechromosome CDS270155 1710 - 0.506433
pth cbdbA576 peptidyl-tRNA hydrolasechromosome CDS466126 570 - 0.517544
queA cbdbA775 S-adenosylmethionine:tRNAribosyltransferase-isom erasechromosome CDS632948 1032 - 0.48062
rbfA cbdbA946 ribosome-binding factor Achromosome CDS773028 357 - 0.459384
rfbA cbdbA499 glucose-1-phosphate thymidylyltransferasechromosome CDS402706 1203 + 0.503741
rimL cbdbA264 acetyltransferase, GNAT familychromosome CDS232115 636 - 0.485849
rimM cbdbA540 16S rRNA processing protein RimMchromosome CDS441160 501 - 0.44511
rnpA cbdbA1017 ribonuclease P protein componentchromosome CDS824238 363 - 0.465565
rph cbdbA1225 ribonuclease PHchromosome CDS985438 726 - 0.486226
rplA cbdbA956 ribosomal protein L1chromosome CDS781890 714 - 0.483193
rplB cbdbA442 ribosomal protein L2chromosome CDS367864 825 + 0.515152
rplC cbdbA439 ribosomal protein L3chromosome CDS366289 618 + 0.511327
rplD cbdbA440 ribosomal protein L4chromosome CDS366909 633 + 0.488152
rplE cbdbA451 ribosomal protein L5chromosome CDS371817 540 + 0.464815
rplF cbdbA453 ribosomal protein L6chromosome CDS372995 549 + 0.471767
rplI cbdbA515 ribosomal protein L9chromosome CDS415387 456 - 0.451754
rplJ cbdbA955 ribosomal protein L10chromosome CDS781208 531 - 0.45951
rplK cbdbA957 ribosomal protein L11chromosome CDS782607 423 - 0.458629
rplL cbdbA954 ribosomal protein L7chromosome CDS780803 372 - 0.483871
rplM cbdbA469 ribosomal protein L13chromosome CDS381798 432 + 0.493056
rplN cbdbA449 ribosomal protein L14chromosome CDS371127 369 + 0.468835
rplO cbdbA457 ribosomal protein L15chromosome CDS374618 462 + 0.517316
rplP cbdbA446 ribosomal protein L16chromosome CDS370183 450 + 0.542222
rplQ cbdbA467 ribosomal protein L17chromosome CDS380666 354 + 0.474576
rplR cbdbA454 ribosomal protein L18chromosome CDS373543 366 + 0.497268
rplS cbdbA278 ribosomal protein L19chromosome CDS245996 396 - 0.487374
rplT cbdbA723 ribosomal protein L20chromosome CDS590618 360 - 0.488889
rplU cbdbA1270 ribosomal protein L21chromosome CDS1014151 399 + 0.498747
rplV cbdbA444 ribosomal protein L22chromosome CDS369007 330 + 0.454545
rplW cbdbA441 ribosomal protein L23chromosome CDS367554 285 + 0.431579
rplX cbdbA450 ribosomal protein L24chromosome CDS371506 312 + 0.467949
rpmA cbdbA1271 ribosomal protein L27chromosome CDS1014539 255 + 0.486275
rpmB cbdbA1186 ribosomal protein L28chromosome CDS957864 189 - 0.486772
rpmC cbdbA447 ribosomal protein L29chromosome CDS370634 198 + 0.434343
rpmD cbdbA456 ribosomal protein L30chromosome CDS374436 183 + 0.409836
rpmE cbdbA1272 ribosomal protein L31chromosome CDS1014800 207 + 0.483092
rpmF cbdbA1203 ribosomal protein L32chromosome CDS971056 219 + 0.520548
rpmG cbdbB20 ribosomal protein L33chromosome CDS783870 168 - 0.440476
rpmH cbdbB22 ribosomal protein L34chromosome CDS824659 141 - 0.553191
rpmI cbdbA724 ribosomal protein L35chromosome CDS590996 204 - 0.47549
rpmJ cbdbA462 ribosomal protein L36chromosome CDS378059 114 + 0.412281
rpsB cbdbA322 ribosomal protein S2chromosome CDS278605 738 - 0.47832
rpsC cbdbA445 ribosomal protein S3chromosome CDS369345 837 + 0.491039
rpsD cbdbA465 ribosomal protein S4chromosome CDS378999 624 + 0.488782
rpsE cbdbA455 ribosomal protein S5chromosome CDS373925 519 + 0.485549
rpsF cbdbA1020 ribosomal protein S6chromosome CDS825771 330 - 0.445455
rpsG cbdbA435 ribosomal protein S7chromosome CDS363340 471 + 0.498938
rpsH cbdbA452 ribosomal protein S8chromosome CDS372584 396 + 0.517677
rpsI cbdbA470 ribosomal protein S9chromosome CDS382242 399 + 0.503759
rpsJ cbdbA438 ribosomal protein S10chromosome CDS365972 309 + 0.433657
rpsK cbdbA464 ribosomal protein S11chromosome CDS378597 393 + 0.531807
rpsL cbdbA434 ribosomal protein S12chromosome CDS362892 435 + 0.514943
rpsM cbdbA463 ribosomal protein S13chromosome CDS378182 390 + 0.471795
rpsN cbdbB14 ribosomal protein S14chromosome CDS372365 186 + 0.505376
rpsO cbdbA931 ribosomal protein S15chromosome CDS760877 264 + 0.465909
rpsP cbdbB15 ribosomal protein S16chromosome CDS441991 249 - 0.485944
rpsQ cbdbA448 ribosomal protein S17chromosome CDS370839 273 + 0.417582
rpsR cbdbA1018 ribosomal protein S18chromosome CDS824835 444 - 0.515766
rpsS cbdbA443 ribosomal protein S19chromosome CDS368695 282 + 0.475177
rpsT cbdbA1738 ribosomal protein S20chromosome CDS1392931 267 + 0.509363
rpsU cbdbA293 ribosomal protein S21chromosome CDS257583 195 - 0.553846
serS cbdbA554 seryl-tRNA synthetasechromosome CDS449918 1242 - 0.487118
tgt cbdbA68 queuine tRNA-ribosyltransferasechromosome CDS45051 1179 + 0.514843
thrS cbdbA726 threonyl-tRNA synthetasechromosome CDS591816 1749 - 0.471698
trmD cbdbA279 tRNA (guanine-N1)-methyltransferasechromosome CDS246515 747 - 0.515395
trmU cbdbA754 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferasechromosome CDS616344 1074 + 0.460894
trpS cbdbA1293 tryptophanyl-tRNA synthetasechromosome CDS1024935 972 - 0.502058
truA cbdbA468 tRNA pseudouridine synthase Achromosome CDS381056 741 + 0.48583
truB cbdbA945 tRNA pseudouridine synthase Bchromosome CDS772123 903 - 0.465116
tsf cbdbA320 putative translation elongation factor Tschromosome CDS278077 504 - 0.513889
tuf cbdbA960 translation elongation factor Tuchromosome CDS784039 1203 - 0.489609
tyrS cbdbA583 tyrosyl-tRNA synthetasechromosome CDS473664 1191 - 0.481108
valS cbdbA384 valyl-tRNA synthetasechromosome CDS323537 2643 + 0.50927