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2024-05-03 16:44:45

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Organism: Rickettsia prowazekii str. Madrid E, Madrid E

Number of genes found: 126

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Rickettsia prowazekii str. Madrid E, Madrid E
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
RP011 NIFR3-LIKE PROTEIN (nifR3)chromosome CDS9661 1026 + 0.350877
RP015 POLY(A) POLYMERASE (pcnB)chromosome CDS13139 1164 - 0.271478
RP039 30S RIBOSOMAL PROTEIN S6 (rpsF)chromosome CDS44799 366 + 0.265027
RP040 30S RIBOSOMAL PROTEIN S18 (rpsR)chromosome CDS45189 288 + 0.315972
RP041 50S RIBOSOMAL PROTEIN L9 (rplI)chromosome CDS45488 516 + 0.294574
RP065 ARGINYL-TRNA SYNTHETASE (argS)chromosome CDS73076 1731 + 0.320624
RP085 CYSTEINYL-TRNA SYNTHETASE (cysS)chromosome CDS94769 1374 + 0.311499
RP086 30S RIBOSOMAL PROTEIN S2 (rpsB)chromosome CDS96550 891 + 0.315376
RP087 ELONGATION FACTOR TS (tsf)chromosome CDS97595 930 + 0.305376
RP099 50S RIBOSOMAL PROTEIN L28 (rpmB)chromosome CDS111301 294 + 0.312925
RP100 50S RIBOSOMAL PROTEIN L31 (rpmE)chromosome CDS111591 237 + 0.312236
RP111 TRNA (GUANINE-N1)-METHYLTRANSFERASE (trmD)chromosome CDS134310 705 + 0.356028
RP112 50S RIBOSOMAL PROTEIN L19 (rplS)chromosome CDS135031 417 + 0.323741
RP130 30S RIBOSOMAL PROTEIN S12 (rpsL)chromosome CDS153172 390 + 0.405128
RP131 30S RIBOSOMAL PROTEIN S7 (rpsG)chromosome CDS153595 483 + 0.335404
RP132 ELONGATION FACTOR G (fusA)chromosome CDS154089 2100 + 0.348095
RP136 50S RIBOSOMAL PROTEIN L11 (rplK)chromosome CDS157477 438 + 0.3379
RP137 50S RIBOSOMAL PROTEIN L1 (rplA)chromosome CDS157917 717 + 0.305439
RP138 50S RIBOSOMAL PROTEIN L10 (rplJ)chromosome CDS158721 510 + 0.333333
RP139 50S RIBOSOMAL PROTEIN L7/L12 (rplL)chromosome CDS159419 378 + 0.349206
RP145 ASPARAGINYL-TRNA SYNTHETASE (aspS)chromosome CDS173034 1818 + 0.347635
RP151 GLUTAMYL-tRNA AMIDOTRANSFERASE SUBUNIT B (gatB)chromosome CDS180520 1452 - 0.326446
RP152 GLUTAMYL-tRNA AMIDOTRANSFERASE SUBUNIT A (gatA)chromosome CDS182139 1482 - 0.360324
RP153 GLUTAMYL-tRNA AMIDOTRANSFERASE SUBUNIT C (gatC)chromosome CDS183623 303 - 0.273927
RP154 RIBOSOME RECYCLING FACTOR (rrf)chromosome CDS184481 561 - 0.322638
RP163 CELL DIVISION PROTEIN FTSJ (ftsJ)chromosome CDS193710 684 + 0.320175
RP208 METHIONYL-TRNA DEFORMYLASE (def)chromosome CDS255698 528 + 0.333333
RP209 METHIONYL-TRNA FORMYLTRANSFERASE (fmt)chromosome CDS256222 912 + 0.323465
RP213 S-ADENOSYLMETHIONINE:tRNA RIBOSYLTRANSFERASE-ISOMERASE (queA)chromosome CDS262829 1152 - 0.298611
RP221 THREONYL-TRNA SYNTHETASE (thrS)chromosome CDS275208 1908 + 0.346436
RP233 50S RIBOSOMAL PROTEIN L13 (rplM)chromosome CDS292839 468 + 0.331197
RP234 30S RIBOSOMAL PROTEIN S9 (rpsI)chromosome CDS293313 486 + 0.325103
RP238 ELONGATION FACTOR P (efp)chromosome CDS296786 567 + 0.306878
RP256 RIBONUCLEASE E (rne)chromosome CDS313933 2052 + 0.307018
RP258 unknownchromosome CDS317723 912 + 0.283991
RP274 PEPTIDE CHAIN RELEASE FACTOR 2 (prfB)chromosome CDS335147 1111 - 0.332133
RP306 unknownchromosome CDS375650 1077 + 0.356546
RP308 HISTIDYL-TRNA SYNTHETASE (hisS)chromosome CDS378350 1251 + 0.310951
RP325 GLUTAMYL-TRNA SYNTHETASE (gltX1)chromosome CDS398557 1344 - 0.298363
RP345 30S RIBOSOMAL PROTEIN S4 (rpsD)chromosome CDS423148 618 - 0.334951
RP348 unknownchromosome CDS428531 498 - 0.240964
RP371 LYSYL-tRNA SYNTHETASE (lysS)chromosome CDS451670 1587 + 0.337114
RP384 PROLYL-TRNA SYNTHETASE (proS)chromosome CDS470606 1299 + 0.308699
RP416 unknownchromosome CDS510810 1266 + 0.327804
RP417 PHENYLALANYL-TRNA SYNTHETASE ALPHA CHAIN (pheS)chromosome CDS512182 1053 + 0.312441
RP421 LEUCYL-TRNA SYNTHETASE (leuS)chromosome CDS517762 2487 + 0.327704
RP422 unknownchromosome CDS520828 612 - 0.277778
RP435 RIBOSOME-BINDING FACTOR A (rbfA)chromosome CDS532512 387 - 0.248062
RP456 RIBOSOMAL PROTEIN L36 (rpmJ)chromosome CDS566947 126 - 0.285714
RP462 RIBONUCLEASE D (rnd)chromosome CDS573066 846 - 0.239953
RP468 TRYPTOPHANYL-TRNA SYNTHETASE (trpS)chromosome CDS581931 993 - 0.295065
RP501 TRNA PSEUDOURIDINE 55 SYNTHASE (truB)chromosome CDS619825 519 + 0.310212
RP502 unknownchromosome CDS620322 381 + 0.301837
RP503 30S RIBOSOMAL PROTEIN S15 (rpsO)chromosome CDS620724 276 + 0.282609
RP504 POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASE (pnp)chromosome CDS621154 2238 + 0.327525
RP510 TRNA DELTA(2)-ISOPENTENYLPYROPHOSPHATE TRANSFERASE (miaA)chromosome CDS628448 936 + 0.284188
RP517 PROBABLE SIGMA(54) MODULATION PROTEIN (yhbH)chromosome CDS640421 432 - 0.252315
RP521 30S RIBOSOMAL PROTEIN S1 (rpsA)chromosome CDS643195 1707 - 0.310486
RP529 PEPTIDE CHAIN RELEASE FACTOR 1 (prfA)chromosome CDS653524 1068 - 0.353933
RP531 TRANSLATION INITIATION FACTOR IF-3 (infC)chromosome CDS656123 558 - 0.306452
RP544 unknownchromosome CDS675117 708 + 0.30226
RP552 TRANSLATION INITIATION FACTOR IF-2 (infB)chromosome CDS681937 2496 - 0.330529
RP555 HEMOLYSIN (tlyA)chromosome CDS688129 756 - 0.314815
RP556 TYROSYL-TRNA SYNTHETASE (tyrS)chromosome CDS689028 1236 - 0.343042
RP604 unknownchromosome CDS763780 1098 - 0.325137
RP605 PEPTIDYL-TRNA HYDROLASE (pth)chromosome CDS765249 558 - 0.272401
RP606 PROBABLE 50S RIBOSOMAL PROTEIN L25 (rplY)chromosome CDS766036 612 - 0.320261
RP608 50S RIBOSOMAL PROTEIN L35 (rpmI)chromosome CDS767726 204 + 0.323529
RP609 CYANELLE 50S RIBOSOMAL PROTEIN L20 (rplT)chromosome CDS767950 354 + 0.347458
RP610 50S RIBOSOMAL PROTEIN L34 (rpmH)chromosome CDS768433 135 + 0.348148
RP611 RIBONUCLEASE P (rnpA)chromosome CDS768581 366 + 0.240437
RP615 RIBOSOMAL PROTEIN S21 (rpsU)chromosome CDS777252 201 - 0.338308
RP617 PROBABLE ISOLEUCYL-TRNA SYNTHETASE (ileS)chromosome CDS778755 3261 + 0.338853
RP623 GLUTAMYL-TRNA SYNTHETASE (gltX2)chromosome CDS792528 1413 + 0.328379
RP628 RIBONUCLEASE PH (rph)chromosome CDS801830 723 - 0.38036
RP633 30S RIBOSOMAL PROTEIN S20 (rpsT)chromosome CDS806490 273 - 0.245421
RP634 50S RIBOSOMAL PROTEIN L17 (rplQ)chromosome CDS806782 411 - 0.311436
RP636 30S RIBOSOMAL PROTEIN S11 (rpsK)chromosome CDS808246 384 - 0.375
RP637 30S RIBOSOMAL PROTEIN S13 (rpsM)chromosome CDS808653 378 - 0.320106
RP640 50S RIBOSOMAL PROTEIN L15 (rplO)chromosome CDS811050 453 - 0.256071
RP641 50S RIBOSOMAL PROTEIN L30 (rpmD)chromosome CDS811516 192 - 0.208333
RP642 30S RIBOSOMAL PROTEIN S5 (rpsE)chromosome CDS811732 528 - 0.352273
RP643 50S RIBOSOMAL PROTEIN L18 (rplR)chromosome CDS812276 357 - 0.266106
RP644 50S RIBOSOMAL PROTEIN L6 (rplF)chromosome CDS812648 534 - 0.294007
RP645 30S RIBOSOMAL PROTEIN S8 (rpsH)chromosome CDS813190 399 - 0.265664
RP646 CYANELLE 30S RIBOSOMAL PROTEIN S14 (rpsN)chromosome CDS813607 306 - 0.320261
RP647 50S RIBOSOMAL PROTEIN L5 (rplE)chromosome CDS813930 540 - 0.27037
RP648 50S RIBOSOMAL PROTEIN L24 (rplX)chromosome CDS814456 342 - 0.298246
RP649 50S RIBOSOMAL PROTEIN L14 (rplN)chromosome CDS814794 369 - 0.363144
RP650 30S RIBOSOMAL PROTEIN S17 (rpsQ)chromosome CDS815223 234 - 0.290598
RP651 50S RIBOSOMAL PROTEIN L29 (rpmC)chromosome CDS815458 216 - 0.240741
RP652 50S RIBOSOMAL PROTEIN L16 (rplP)chromosome CDS815666 411 - 0.357664
RP653 30S RIBOSOMAL PROTEIN S3 (rpsC)chromosome CDS816091 654 - 0.29052
RP654 50S RIBOSOMAL PROTEIN L22 (rplV)chromosome CDS816746 360 - 0.277778
RP655 30S RIBOSOMAL PROTEIN S19 (rpsS)chromosome CDS817115 279 - 0.293907
RP656 50S RIBOSOMAL PROTEIN L2 (rplB)chromosome CDS817418 822 - 0.340633
RP657 50S RIBOSOMAL PROTEIN L23 (rplW)chromosome CDS818240 297 - 0.222222
RP658 50S RIBOSOMAL PROTEIN L4 (rplD)chromosome CDS818533 624 - 0.302885
RP659 50S RIBOSOMAL PROTEIN L3 (rplC)chromosome CDS819398 651 - 0.3149
RP660 30S RIBOSOMAL PROTEIN S10 (rpsJ)chromosome CDS820049 318 - 0.311321
RP661 ELONGATION FACTOR TU (tuf)chromosome CDS820460 1185 - 0.368776
RP664 unknownchromosome CDS822162 747 + 0.282463
RP669 PUTATIVE ATP-DEPENDENT RNA HELICASE RHLE (rhlE)chromosome CDS828792 1224 - 0.322712
RP672 DIMETHYLADENOSINE TRANSFERASE (ksgA)chromosome CDS833904 807 - 0.303594
RP683 METHIONYL-TRNA SYNTHETASE (metS)chromosome CDS849130 1527 - 0.316961
RP687 VALYL-TRNA SYNTHETASE (valS)chromosome CDS854889 2445 + 0.329652
RP693 RIBOSOMAL-PROTEIN-ALANINE ACETYLTRANSFERASE (rimJ)chromosome CDS866206 552 - 0.29529
RP721 QUEUINE TRNA-RIBOSYLTRANSFERASE (tgt)chromosome CDS908858 1086 - 0.367403
RP751 50S RIBOSOMAL PROTEIN L21 (rplU)chromosome CDS938350 318 + 0.286164
RP752 50S RIBOSOMAL PROTEIN L27 (rpmA)chromosome CDS938692 261 + 0.375479
RP773 50S RIBOSOMAL PROTEIN L32 (rpmF)chromosome CDS965174 198 - 0.313131
RP774 unknownchromosome CDS965465 462 + 0.277056
RP783 SERYL-TRNA SYNTHETASE (serS)chromosome CDS981490 1278 + 0.323161
RP808 unknownchromosome CDS1017871 1338 - 0.33707
RP814 TRANSLATION INITIATION FACTOR IF-1 (infA)chromosome CDS1024469 216 + 0.351852
RP824 METHIONINE AMINOPEPTIDASE (map)chromosome CDS1039287 780 + 0.346154
RP831 unknownchromosome CDS1045044 447 - 0.313199
RP846 SFHB PROTEIN HOMOLOG (sfhB)chromosome CDS1065237 942 + 0.323779
RP847 POSSIBLE PROTOPORPHYRINOGEN OXIDASE (hemK)chromosome CDS1066640 1557 + 0.297367
RP848 unknownchromosome CDS1068162 942 - 0.329087
RP849 GLYCYL-TRNA SYNTHETASE BETA CHAIN (glyS)chromosome CDS1069264 1947 - 0.292758
RP850 GLYCYL-TRNA SYNTHETASE ALPHA SUBUNIT (glyQ)chromosome CDS1071251 870 - 0.364368
RP856 ALANYL-TRNA SYNTHETASE (alaS)chromosome CDS1077947 2634 + 0.318147
RP857 PSEUDOURIDYLATE SYNTHASE I (truA)chromosome CDS1082455 762 - 0.314961
RP878 30S RIBOSOMAL PROTEIN S16 (rpsP)chromosome CDS1102376 336 - 0.372024
RP879 50S RIBOSOMAL PROTEIN L33 (rpmG)chromosome CDS1102716 171 - 0.292398