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2024-05-14 14:17:20

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Organism: Ureaplasma parvum serovar 3 str. ATCC 700970, ATCC 700970

Number of genes found: 105

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Ureaplasma parvum serovar 3 str. ATCC 700970, ATCC 700970
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA UU423 conserved hypotheticalSubName: Full=Conserved hypothetical; chromosome CDS486622 711 + 0.225035
NA UU149 unique hypotheticalRecName: Full=Uncharacterized protein UU149; chromosome CDS190922 297 + 0.228956
NA UU537 conserved hypotheticalSubName: Full=Conserved hypothetical; chromosome CDS665929 1317 - 0.277904
NA UU211 conserved hypotheticalSubName: Full=Conserved hypothetical; chromosome CDS255184 309 - 0.245955
MBA UU375 multiple banded antigenSubName: Full=Multiple banded antigen; chromosome CDS427313 1248 - 0.383013
alaS UU369 alanyl-tRNA synthetaseRecName: Full=Alanine--tRNA ligase; EC=6.1.1.7; AltName: Full=Alanyl-tRNA synthetase; Short=AlaRS; chromosome CDS420084 2721 + 0.271591
argS UU278 arginyl tRNA synthetaseRecName: Full=Arginine--tRNA ligase; EC=6.1.1.19; AltName: Full=Arginyl-tRNA synthetase; Short=ArgRS; chromosome CDS312495 1653 + 0.260133
asnS UU365 asparaginyl-tRNA synthetaseRecName: Full=Asparagine--tRNA ligase; EC=6.1.1.22; AltName: Full=Asparaginyl-tRNA synthetase; Short=AsnRS; chromosome CDS414766 1365 - 0.297436
aspS UU286 aspartyl-tRNA synthetaseRecName: Full=Aspartate--tRNA ligase; EC=6.1.1.12; AltName: Full=Aspartyl-tRNA synthetase; Short=AspRS; chromosome CDS322935 1737 + 0.27346
cysS UU123 cysteinyl-tRNA synthetaseRecName: Full=Cysteine--tRNA ligase; EC=6.1.1.16; AltName: Full=Cysteinyl-tRNA synthetase; Short=CysRS; chromosome CDS162462 1311 + 0.237223
deaD UU582 ATP-dependent RNA helicaseSubName: Full=ATP-dependent RNA helicase; chromosome CDS727817 1332 - 0.261261
def UU465 polypeptide deformylaseRecName: Full=Peptide deformylase; Short=PDF; EC=3.5.1.88; AltName: Full=Polypeptide deformylase; chromosome CDS528910 597 + 0.281407
efp UU298 translation elongation factor PRecName: Full=Elongation factor P; Short=EF-P; chromosome CDS340721 567 + 0.303351
fmt UU463 methionyl-tRNA formyltransferaseRecName: Full=Methionyl-tRNA formyltransferase; EC=2.1.2.9; chromosome CDS526944 918 - 0.271242
frr UU512 ribosome releasing factorRecName: Full=Ribosome-recycling factor; Short=RRF; AltName: Full=Ribosome-releasing factor; chromosome CDS634265 552 - 0.28442
fusA UU523 translation elongation factor GRecName: Full=Elongation factor G; Short=EF-G; chromosome CDS648562 2067 - 0.337687
gatA UU545 glutamyl-tRNA amidotransferase subunit ASubName: Full=Glutamyl-tRNA amidotransferase subunit A; chromosome CDS679258 1434 - 0.272664
gatB UU544 glutamyl-tRNA amidotransferase subunit BRecName: Full=Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Short=Asp/Glu-ADT subunit B; EC=6.3.5.-; chromosome CDS677822 1434 - 0.267085
gltX UU599 glutamyl-tRNA synthetaseRecName: Full=Glutamate--tRNA ligase; EC=6.1.1.17; AltName: Full=Glutamyl-tRNA synthetase; Short=GluRS; chromosome CDS746762 1449 - 0.258109
glyS UU493 glycyl-tRNA synthetaseRecName: Full=Glycine--tRNA ligase; EC=6.1.1.14; AltName: Full=Glycyl-tRNA synthetase; Short=GlyRS; chromosome CDS590546 1422 + 0.267229
gtp1 UU595 GTP-binding proteinRecName: Full=Ribosome-binding ATPase YchF; chromosome CDS743012 1107 - 0.288166
hisS UU285 histidyl-tRNA synthetaseRecName: Full=Histidine--tRNA ligase; EC=6.1.1.21; AltName: Full=Histidyl-tRNA synthetase; Short=HisRS; chromosome CDS321667 1263 + 0.25574
hisT UU536 pseudouridylate synthase IRecName: Full=tRNA pseudouridine synthase A; EC=5.4.99.12; AltName: Full=tRNA pseudouridine(38-40) synthase; AltName: Full=tRNA pseudouridylate synthase I; AltName: Full=tRNA-uridine isomerase I; chromosome CDS665142 726 - 0.268595
hlyA UU436 hemolysinSubName: Full=Hemolysin; chromosome CDS497710 744 + 0.240591
ileS UU410 isoleucyl-tRNA synthetaseRecName: Full=Isoleucine--tRNA ligase; EC=6.1.1.5; AltName: Full=Isoleucyl-tRNA synthetase; Short=IleRS; chromosome CDS471224 2703 + 0.26822
infA UU253 translation initiation factor IF-1RecName: Full=Translation initiation factor IF-1; chromosome CDS288511 225 + 0.333333
infB UU320 translation initiation factor IF-2RecName: Full=Translation initiation factor IF-2; chromosome CDS366428 1845 + 0.296477
infC UU227 translation initiation factor IF3RecName: Full=Translation initiation factor IF-3; chromosome CDS274434 537 + 0.271881
ksgA UU601 dimethyladenosine transferaseRecName: Full=Ribosomal RNA small subunit methyltransferase A; EC=2.1.1.182; AltName: Full=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase; AltName: Full=16S rRNA dimethyladenosine transferase; AltName: Full=16S rRNA dimethylase; AltName: Full=S-adenosylmethionine-6-N, N-adenosyl(rRNA) dimethyltransferase; chromosome CDS749031 774 - 0.22739
leuS UU371 leucyl-tRNA synthetaseRecName: Full=Leucine--tRNA ligase; EC=6.1.1.4; AltName: Full=Leucyl-tRNA synthetase; Short=LeuRS; chromosome CDS423256 2421 + 0.283354
lysS UU062 lysyl-tRNA synthetaseRecName: Full=Lysine--tRNA ligase; EC=6.1.1.6; AltName: Full=Lysyl-tRNA synthetase; Short=LysRS; chromosome CDS77527 1482 + 0.273954
map UU252 methionine aminopeptidase (map)RecName: Full=Methionine aminopeptidase; Short=MAP; Short=MetAP; EC=3.4.11.18; AltName: Full=Peptidase M; chromosome CDS287734 750 + 0.306667
metS UU197 methionyl-tRNA synthetaseRecName: Full=Methionine--tRNA ligase; EC=6.1.1.10; AltName: Full=Methionyl-tRNA synthetase; Short=MetRS; chromosome CDS239809 1566 + 0.255428
pheS UU458 phenylalanine-tRNA synthetase alpha chainRecName: Full=Phenylalanine--tRNA ligase alpha subunit; EC=6.1.1.20; AltName: Full=Phenylalanyl-tRNA synthetase alpha subunit; Short=PheRS; chromosome CDS522503 1002 - 0.253493
prfA UU003 peptide chain release factor 1RecName: Full=Peptide chain release factor 1; Short=RF-1; chromosome CDS1935 1080 + 0.32037
proS UU452 prolyl aminoacyl-tRNA synthetaseRecName: Full=Proline--tRNA ligase; EC=6.1.1.15; AltName: Full=Prolyl-tRNA synthetase; Short=ProRS; chromosome CDS512663 1419 - 0.282593
pth UU078 peptidyl-tRNA hydrolaseRecName: Full=Peptidyl-tRNA hydrolase; Short=PTH; EC=3.1.1.29; chromosome CDS94806 561 - 0.258467
rbfA UU321 ribosome binding factor ARecName: Full=Ribosome-binding factor A; chromosome CDS368280 351 + 0.290598
rluD UU313 pseudouridine synthase (uracil hydrolase)SubName: Full=Pseudouridine synthase (Uracil hydrolase); chromosome CDS356922 900 - 0.263333
rnpA UU603 ribonuclease p-protein componentRecName: Full=Ribonuclease P protein component; Short=RNase P protein; Short=RNaseP protein; EC=3.1.26.5; AltName: Full=Protein C5; chromosome CDS751056 342 - 0.254386
rpL1 UU540 ribosomal protein L1RecName: Full=50S ribosomal protein L1; chromosome CDS669559 690 - 0.297101
rpL10 UU010 ribosomal protein L10RecName: Full=50S ribosomal protein L10; chromosome CDS7954 501 + 0.323353
rpL11 UU541 ribosomal protein L11RecName: Full=50S ribosomal protein L11; chromosome CDS670251 453 - 0.324503
rpL13 UU577 ribosomal protein L13RecName: Full=50S ribosomal protein L13; chromosome CDS721683 447 - 0.302013
rpL14 UU241 ribosomal protein L14RecName: Full=50S ribosomal protein L14; chromosome CDS281674 369 + 0.365854
rpL15 UU249 ribosomal protein L15RecName: Full=50S ribosomal protein L15; chromosome CDS285145 447 + 0.322148
rpL16 UU238 ribosomal protein L16RecName: Full=50S ribosomal protein L16; chromosome CDS280757 417 + 0.333333
rpL17 UU258 ribosomal protein L17RecName: Full=50S ribosomal protein L17; chromosome CDS290730 360 + 0.358333
rpL18 UU247 ribosomal protein L18RecName: Full=50S ribosomal protein L18; chromosome CDS284134 366 + 0.311475
rpL19 UU566 ribosomal protein L19RecName: Full=50S ribosomal protein L19; chromosome CDS707526 372 - 0.298387
rpL2 UU234 ribosomal protein L2RecName: Full=50S ribosomal protein L2; chromosome CDS277866 840 + 0.334524
rpL20 UU229 ribosomal protein L20RecName: Full=50S ribosomal protein L20; chromosome CDS275234 363 + 0.316804
rpL21 UU212 ribosomal protein L21RecName: Full=50S ribosomal protein L21; chromosome CDS255498 303 - 0.283828
rpL22 UU236 ribosomal protein L22RecName: Full=50S ribosomal protein L22; chromosome CDS279014 936 + 0.292735
rpL23 UU233 ribosomal protein L23RecName: Full=50S ribosomal protein L23; chromosome CDS277495 318 + 0.311321
rpL24 UU242 ribosomal protein L24RecName: Full=50S ribosomal protein L24; chromosome CDS282057 333 + 0.288288
rpL27 UU210 ribosomal protein L27RecName: Full=50S ribosomal protein L27; chromosome CDS254876 303 - 0.323432
rpL28 UU209.1 ribosomal protein L28RecName: Full=50S ribosomal protein L28; chromosome CDS254259 195 + 0.338462
rpL29 UU239 ribosomal protein L29RecName: Full=50S ribosomal protein L29; chromosome CDS281173 228 + 0.315789
rpL3 UU231 ribosomal protein L3RecName: Full=50S ribosomal protein L3; chromosome CDS276145 702 + 0.336182
rpL31 UU002 ribosomal protein L31RecName: Full=50S ribosomal protein L31; chromosome CDS1515 288 + 0.277778
rpL32 UU333 ribosomal protein L32RecName: Full=50S ribosomal protein L32; chromosome CDS378900 174 + 0.33908
rpL33 UU533 ribosomal protein L33RecName: Full=50S ribosomal protein L33; chromosome CDS662132 162 - 0.271605
rpL34 UU604 ribosomal protein L34RecName: Full=50S ribosomal protein L34; chromosome CDS751403 147 - 0.346939
rpL35 UU228 ribosomal protein L35RecName: Full=50S ribosomal protein L35; chromosome CDS274985 195 + 0.307692
rpL36 UU254 ribosomal protein L36RecName: Full=50S ribosomal protein L36; chromosome CDS288759 114 + 0.342105
rpL4 UU232 ribosomal protein L4RecName: Full=50S ribosomal protein L4; chromosome CDS276857 636 + 0.320755
rpL5 UU243 ribosomal protein L5RecName: Full=50S ribosomal protein L5; chromosome CDS282406 555 + 0.308108
rpL6 UU246 ribosomal protein L6RecName: Full=50S ribosomal protein L6; chromosome CDS283567 549 + 0.326047
rpL7/L12 UU011 ribosomal protein L7/L12RecName: Full=50S ribosomal protein L7/L12; chromosome CDS8479 366 + 0.352459
rpL9 UU551 ribosomal protein L9RecName: Full=50S ribosomal protein L9; chromosome CDS685893 438 - 0.242009
rpS10 UU230 ribosomal protein S10RecName: Full=30S ribosomal protein S10; chromosome CDS275815 306 + 0.27451
rpS11 UU256 ribosomal protein S11RecName: Full=30S ribosomal protein S11; chromosome CDS289317 366 + 0.355191
rpS12 UU525 ribosomal protein S12RecName: Full=30S ribosomal protein S12; chromosome CDS651150 426 - 0.36385
rpS13 UU255 ribosomal protein S13RecName: Full=30S ribosomal protein S13; chromosome CDS288897 399 + 0.330827
rpS14 UU244 ribosomal protein S14RecName: Full=30S ribosomal protein S14 type Z; chromosome CDS282964 186 + 0.365591
rpS16 UU568 ribosomal protein S16RecName: Full=30S ribosomal protein S16; chromosome CDS708606 306 - 0.281046
rpS17 UU240 ribosomal protein S17RecName: Full=30S ribosomal protein S17; chromosome CDS281400 255 + 0.329412
rpS18 UU552 ribosomal protein S18RecName: Full=30S ribosomal protein S18; chromosome CDS686414 240 - 0.333333
rpS19 UU235 ribosomal protein S19RecName: Full=30S ribosomal protein S19; chromosome CDS278726 267 + 0.303371
rpS2 UU026 ribosomal protein S2RecName: Full=30S ribosomal protein S2; chromosome CDS26879 1050 - 0.290476
rpS20 UU310 ribosomal protein S20RecName: Full=30S ribosomal protein S20; chromosome CDS355093 255 - 0.282353
rpS21 UU277 ribosomal protein S21RecName: Full=30S ribosomal protein S21; chromosome CDS312204 168 + 0.291667
rpS3 UU237 ribosomal protein S3RecName: Full=30S ribosomal protein S3; chromosome CDS279969 774 + 0.322997
rpS4 UU498 ribosomal protein S4RecName: Full=30S ribosomal protein S4; chromosome CDS612832 609 - 0.308703
rpS5 UU248 ribosomal protein S5RecName: Full=30S ribosomal protein S5; chromosome CDS284517 612 + 0.325163
rpS6 UU554 ribosomal protein S6RecName: Full=30S ribosomal protein S6; chromosome CDS687207 483 - 0.296066
rpS7 UU524 ribosomal protein S7RecName: Full=30S ribosomal protein S7; chromosome CDS650655 468 - 0.32265
rpS8 UU245 ribosomal protein S8RecName: Full=30S ribosomal protein S8; chromosome CDS283160 399 + 0.290727
rpS9 UU576 ribosomal protein S9RecName: Full=30S ribosomal protein S9; chromosome CDS721262 402 - 0.338308
rps15 UU204 ribosomal protein S15RecName: Full=30S ribosomal protein S15; chromosome CDS249363 270 - 0.285185
serS UU106 seryl-tRNA synthetaseRecName: Full=Serine--tRNA ligase; EC=6.1.1.11; AltName: Full=Seryl-tRNA synthetase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase; chromosome CDS135132 1257 + 0.27685
sfhB UU113 pseudouridine synthase (uracil hydrolase)RecName: Full=Pseudouridine synthase; EC=5.4.99.-; chromosome CDS144136 948 + 0.212025
spoU-1 UU124 rRNA methylaseSubName: Full=rRNA methylase; chromosome CDS163774 720 + 0.245833
spoU-2 UU268 rRNA methylaseRecName: Full=Putative tRNA (cytidine(34)-2-O)-methyltransferase; EC=2.1.1.207; AltName: Full=tRNA (cytidine/uridine-2-O-)-methyltransferase; chromosome CDS304282 519 + 0.252408
spoU-3 UU327 rRNA methylaseSubName: Full=rRNA methylase; chromosome CDS372921 774 + 0.215762
thrS UU534 threonyl-tRNA synthetaseRecName: Full=Threonine--tRNA ligase; EC=6.1.1.3; AltName: Full=Threonyl-tRNA synthetase; Short=ThrRS; chromosome CDS662354 1743 - 0.279403
trmD UU567 tRNA (guanine-N1)-methyltransferaseRecName: Full=tRNA (guanine-N(1)-)-methyltransferase; EC=2.1.1.228; AltName: Full=M1G-methyltransferase; AltName: Full=tRNA [GM37] methyltransferase; chromosome CDS707907 687 - 0.296943
trmU UU402 tRNA-(5-methylaminomethyl-2-thiouridylate)methyl transferaseRecName: Full=tRNA-specific 2-thiouridylase MnmA; EC=2.8.1.-; chromosome CDS462275 1158 - 0.292746
trpS UU175 tryptophanyl-tRNA synthetaseRecName: Full=Tryptophan--tRNA ligase; EC=6.1.1.2; AltName: Full=Tryptophanyl-tRNA synthetase; Short=TrpRS; chromosome CDS214981 1002 - 0.272455
truB UU354 tRNA pseudouridine 55 synthaseRecName: Full=tRNA pseudouridine synthase B; EC=5.4.99.25; AltName: Full=tRNA pseudouridine(55) synthase; Short=Psi55 synthase; AltName: Full=tRNA pseudouridylate synthase; AltName: Full=tRNA-uridine isomerase; chromosome CDS401965 684 + 0.266082
tsf UU514 protein chain elongation factor EF-tsRecName: Full=Elongation factor Ts; Short=EF-Ts; chromosome CDS635625 876 - 0.293379
tuf UU522 translation elongation factor tu (EF-tu)RecName: Full=Elongation factor Tu; Short=EF-Tu; chromosome CDS647241 1185 - 0.35865
tyrS UU117 tyrosyl tRNA synthetaseRecName: Full=Tyrosine--tRNA ligase; EC=6.1.1.1; AltName: Full=Tyrosyl-tRNA synthetase; Short=TyrRS; chromosome CDS152590 1248 - 0.241987
valS UU267 valyl-tRNA synthetaseRecName: Full=Valine--tRNA ligase; EC=6.1.1.9; AltName: Full=Valyl-tRNA synthetase; Short=ValRS; chromosome CDS301653 2625 + 0.247619