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2024-05-18 23:34:41

Gene list

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COG category: Lipid transport and metabolism
Genomic element: chromosome

Number of genes found: 109

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Shewanella oneidensis MR-1, MR-1
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
SO0075 AMP-binding family proteinchromosome CDS87148 1707 + 0.496778
SO0123 acyltransferase family proteinchromosome CDS132352 561 - 0.490196
SO0194 acyltransferase family proteinchromosome CDS203016 1863 + 0.47504
SO0197 fatty acid desaturase, family 1chromosome CDS207241 1107 - 0.455285
SO0347 acyltransferase family proteinchromosome CDS353751 909 - 0.476348
SO0348 acyltransferase family proteinchromosome CDS354700 903 - 0.447398
SO0355 AMP-binding proteinchromosome CDS362346 1665 - 0.488288
SO0438 oxidoreductase, short chain dehydrogenase/reductase familychromosome CDS463857 804 + 0.506219
SO0496 conserved hypothetical proteinchromosome CDS520371 924 - 0.361472
SO0559 MaoC domain proteinchromosome CDS579229 831 + 0.481348
SO0572 enoyl-CoA hydratase/isomerase family proteinchromosome CDS592180 807 + 0.468401
SO0616 esterase, putativechromosome CDS642233 912 + 0.470395
SO0772 oxidoreductase, short chain dehydrogenase/reductase familychromosome CDS785081 720 + 0.481944
SO0789 conserved hypothetical proteinchromosome CDS803222 618 - 0.475728
SO0801 conserved hypothetical proteinchromosome CDS813428 915 - 0.535519
SO0840 acetyl-CoA carboxylase multifunctional enzyme accADC, carboxyl transferase subunit alpha/carboxyl transferase subunit beta/biotin carboxylasechromosome CDS856575 4554 + 0.467721
SO1250 conserved hypothetical proteinchromosome CDS1300789 531 + 0.487759
SO1391 conserved hypothetical proteinchromosome CDS1448280 1332 + 0.500751
SO1474 conserved hypothetical proteinchromosome CDS1539325 438 + 0.436073
SO1486 cytosolic long-chain acyl-CoA thioester hydrolase family proteinchromosome CDS1553032 369 + 0.457995
SO1679 acyl-CoA dehydrogenase family proteinchromosome CDS1766172 1158 + 0.522453
SO1680 enoyl-CoA hydratase/isomerase family proteinchromosome CDS1767382 774 + 0.534884
SO1681 enoyl-CoA hydratase/isomerase family proteinchromosome CDS1768155 1152 + 0.494792
SO1683 3-oxoacyl-(acyl-carrier-protein) reductase, putativechromosome CDS1770317 759 + 0.496706
SO1742 conserved hypothetical proteinchromosome CDS1821611 1050 + 0.512381
SO1744 AMP-binding proteinchromosome CDS1823773 1845 + 0.496477
SO1873 conserved hypothetical proteinchromosome CDS1970320 606 - 0.405941
SO1891 3-oxoadipate CoA-succinyl transferase, beta subunitchromosome CDS1987930 657 - 0.502283
SO1894 acetyl-CoA carboxylase, biotin carboxylase, putativechromosome CDS1990428 2085 - 0.516067
SO1895 enoyl-CoA hydratase/isomerase family proteinchromosome CDS1992512 867 - 0.532872
SO1911 oxidoreductase, short chain dehydrogenase/reductase familychromosome CDS2009613 864 + 0.46875
SO1971 AMP-binding family proteinchromosome CDS2075392 1737 + 0.466897
SO2024 hypothetical proteinchromosome CDS2122778 1227 + 0.488998
SO2395 acyl-CoA dehydrogenase family proteinchromosome CDS2498972 1758 - 0.472696
SO2397 oxidoreductase, short-chain dehydrogenase/reductase familychromosome CDS2501539 828 - 0.493961
SO2492 oxidoreductase, acyl-CoA dehydrogenase familychromosome CDS2615773 2280 - 0.476754
SO2524 phytase, putativechromosome CDS2650762 1986 + 0.482377
SO2536 oxidoreductase, acyl-CoA dehydrogenase familychromosome CDS2663387 2448 + 0.48652
SO2647 cytosolic long-chain acyl-CoA thioester hydrolase family proteinchromosome CDS2784575 432 + 0.462963
SO2768 acyl-CoA dehydrogenase family proteinchromosome CDS2891056 1791 - 0.495254
SO2772 cytosolic long-chain acyl-CoA thioester hydrolase family proteinchromosome CDS2895188 480 - 0.470833
SO2813 oxidoreductase, short chain dehydrogenase/reductase familychromosome CDS2934468 765 - 0.494118
SO2853 3-oxoacyl-(acyl-carrier-protein) synthase III, putativechromosome CDS2976946 1065 + 0.464789
SO2935 oxidoreductase, short-chain dehydrogenase/reductase familychromosome CDS3071808 738 + 0.482385
SO3088 fatty oxidation complex, alpha subunitchromosome CDS3210691 2124 - 0.478343
SO3089 fatty oxidation complex, beta subunitchromosome CDS3212814 1311 - 0.495042
SO3099 long-chain fatty acid transport protein, putativechromosome CDS3225094 1323 + 0.454271
SO3263 3-oxoacyl-(acyl-carrier-protein) reductase, putativechromosome CDS3399505 768 + 0.445312
SO3265 conserved hypothetical proteinchromosome CDS3401476 1239 + 0.454399
SO3382 oxidoreductase, short-chain dehydrogenase/reductase familychromosome CDS3520699 801 - 0.454432
SO3575 CDP-diacylglycerol--serine O-phosphatidyltransferase, putativechromosome CDS3740684 810 - 0.445679
SO3807 sterol desaturase family proteinchromosome CDS3960920 864 - 0.451389
SO3857 PAP2 family proteinchromosome CDS4003008 528 - 0.473485
SO3908 enoyl-CoA hydratase/isomerase family proteinchromosome CDS4055183 738 + 0.433604
SO4170 C-factor, putativechromosome CDS4343403 711 + 0.464135
SO4195 PAP2 family proteinchromosome CDS4363472 513 - 0.48538
SO4232 long-chain fatty acid transport proteinchromosome CDS4408573 1314 - 0.467276
SO4335 phosphatidylglycerophosphatase B, putativechromosome CDS4527624 783 + 0.471264
SO4359 outer membrane protein, putativechromosome CDS4553623 1971 - 0.38204
SO4367 acyltransferase family proteinchromosome CDS4562493 852 + 0.50939
SO4368 acyl carrier protein, putativechromosome CDS4563328 255 + 0.427451
SO4369 acyl carrier protein, putativechromosome CDS4563592 249 + 0.441767
SO4371 conserved hypothetical proteinchromosome CDS4564385 1365 + 0.502564
SO4372 thioester dehydrase family proteinchromosome CDS4565742 375 + 0.530667
SO4380 3-oxoacyl-(acyl-carrier-protein) synthase II, putativechromosome CDS4575430 1218 + 0.536946
SO4381 thioester dehydrase family proteinchromosome CDS4576653 543 + 0.508287
SO4576 O-succinylbenzoic acid--CoA ligase, putativechromosome CDS4770745 1395 + 0.488889
accB acetyl-CoA carboxylase, biotin carboxyl carrier proteinchromosome CDS536017 459 - 0.505447
acpD acyl carrier protein phosphodiesterasechromosome CDS4590257 597 - 0.477387
acpP acyl carrier proteinchromosome CDS2897778 234 - 0.42735
acpS holo-(acyl-carrier protein) synthasechromosome CDS1408200 384 + 0.510417
acs acetyl-coenzyme A synthetasechromosome CDS2861904 1953 + 0.504352
atoB acetyl-CoA acetyltransferasechromosome CDS1763183 1191 + 0.518052
atoD acetate CoA-transferase, subunit Achromosome CDS1988693 705 - 0.500709
cdsA phosphatidate cytidylyltransferasechromosome CDS1715524 765 + 0.475817
dxr 1-deoxy-D-xylulose 5-phosphate reductoisomerasechromosome CDS1716293 1191 + 0.497901
dxs deoxyxylulose-5-phosphate synthasechromosome CDS1601183 1869 - 0.501338
fabA 3-hydroxydecanoyl-(acyl-carrier-protein)dehydrat asechromosome CDS1947497 516 - 0.437984
fabB 3-oxoacyl-(acyl-carrier-protein) synthase Ichromosome CDS3191404 1212 - 0.475248
fabD malonyl CoA-acyl carrier protein transacylasechromosome CDS2898931 927 - 0.489752
fabF-1 3-oxoacyl-(acyl-carrier-protein) synthase IIchromosome CDS2896330 1239 - 0.497982
fabF-2 3-oxoacyl-(acyl-carrier-protein) synthase IIchromosome CDS4578026 1263 + 0.534442
fabG-1 3-oxoacyl-(acyl-carrier-protein) reductasechromosome CDS2898175 747 - 0.45917
fabG-2 3-oxoacyl-(acyl-carrier-protein) reductasechromosome CDS4577300 726 + 0.526171
fabH-1 3-oxoacyl-(acyl-carrier-protein) synthase IIIchromosome CDS2899962 960 - 0.489583
fabH-2 3-oxoacyl-(acyl-carrier-protein) synthase IIIchromosome CDS3028125 1026 - 0.477583
fabZ (3R)-hydroxymyristoyl-(acyl-carrier-protein)dehy dratasechromosome CDS1723041 465 + 0.455914
fadA fatty oxidation complex, beta subunitchromosome CDS23307 1164 - 0.496564
fadB fatty oxidation complex, alpha subunitchromosome CDS24493 2151 - 0.491399
fadD-1 long-chain-fatty-acid--CoA ligasechromosome CDS2707886 1674 - 0.454002
fadD-2 long-chain-fatty-acid--CoA ligasechromosome CDS3816560 1599 + 0.459037
garR 2-hydroxy-3-oxopropionate reductasechromosome CDS2894029 876 - 0.487443
ispD 4-diphosphocytidyl-2C-methyl-D-erythritolsynthas echromosome CDS3582325 750 - 0.494667
ispE 4-diphosphocytidyl-2C-methyl-D-erythritol kinasechromosome CDS3985657 855 + 0.501754
ispF 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthasechromosome CDS3581793 480 - 0.510417
ispG 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthasechromosome CDS3463790 1116 - 0.491039
ivd isovaleryl-CoA dehydrogenasechromosome CDS1995149 1170 - 0.504274
lypA lysophospholipase L2chromosome CDS4938680 990 + 0.465657
lytB penicillin tolerance protein LytBchromosome CDS3683909 957 - 0.45768
mmsB 3-hydroxyisobutyrate dehydrogenasechromosome CDS1769390 903 + 0.498339
pccB-1 3-methylcrotonyl CoA carboxylase, beta subunitchromosome CDS1993425 1608 - 0.534826
pgpA phosphatidylglycerophosphatase Achromosome CDS3609773 495 - 0.470707
pgsA CDP-diacylglycerol--glycerol-3-phosphate3-phosph atidyltransferasechromosome CDS1954433 549 + 0.453552
plsB glycerol-3-phosphate acyltransferasechromosome CDS4796591 2430 - 0.456379
plsC 1-acyl-sn-glycerol-3-phosphate acyltransferasechromosome CDS588370 744 + 0.458333
plsX fatty acid/phospholipid synthesis protein PlsXchromosome CDS2900931 1029 - 0.471331
pssA CDP-diacylglycerol--serineO-phosphatidyltransferasechromosome CDS2493871 1314 - 0.461187
tesB acyl-CoA thioesterase IIchromosome CDS2010600 867 + 0.478662
uppS undecaprenyl diphosphate synthasechromosome CDS1714583 828 + 0.469807