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2024-05-20 06:17:37

Gene list

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COG category: Lipid transport and metabolism
Genomic element: chromosome

Number of genes found: 43

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Prochlorococcus marinus subsp. pastoris str. CCMP1986, MED4
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA PMM0632 Short-chain dehydrogenase/reductase (SDR) superfamilySubName: Full=Short-chain dehydrogenase/reductase (SDR) superfamily; chromosome CDS600795 708 - 0.309322
NA PMM1280 putative bifuntional enzyme: tRNA methyltransferase; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthaseSubName: Full=Putative bifuntional enzyme: tRNA methyltransferase 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; EC=2.1.1.31; EC=4.6.1.12; Flags: Precursor; chromosome CDS1230305 1224 - 0.339052
NA PMM1108 Phospholipid and glycerol acyltransferase (from 'motifs_6.msf')SubName: Full=Phospholipid and glycerol acyltransferase (From motifs_6.msf); chromosome CDS1057133 678 + 0.311209
NA PMM1085 Phosphatidate cytidylyltransferaseRecName: Full=Phosphatidate cytidylyltransferase; EC=2.7.7.41; Flags: Precursor; chromosome CDS1028988 858 + 0.312354
NA PMM1698 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1633927 450 + 0.251111
NA PMM1336 Putative (3R)-hydroxymyristoyl-[acyl carrier protein] dehydrataseRecName: Full=3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ; EC=4.2.1.59; AltName: Full=(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; Short=(3R)-hydroxymyristoyl-ACP dehydrase; AltName: Full=Beta-hydroxyacyl-ACP dehydratase; chromosome CDS1286221 459 - 0.372549
NA PMM1126 Domain of unknown function DUF33SubName: Full=Uncharacterized protein; chromosome CDS1075636 2016 - 0.268849
NA PMM1382 fatty acid desaturase, type 2SubName: Full=Fatty acid desaturase, type 2; EC=1.14.99.-; chromosome CDS1331162 1179 + 0.341815
NA PMM0694 Short-chain dehydrogenase/reductase (SDR) superfamilySubName: Full=Short-chain dehydrogenase/reductase (SDR) superfamily; chromosome CDS661208 666 + 0.327327
NA PMM0535 putative short-chain dehydrogenaseSubName: Full=Putative short-chain dehydrogenase; chromosome CDS506510 708 + 0.331921
NA PMM0414 putative short chain dehydrogenaseSubName: Full=Putative short chain dehydrogenase; chromosome CDS392828 705 + 0.313475
NA PMM0478 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS452379 714 - 0.259104
NA PMM1361 Short-chain dehydrogenase/reductase (SDR) superfamilySubName: Full=Short-chain dehydrogenase/reductase (SDR) superfamily; chromosome CDS1309840 930 + 0.333333
Dxs PMM0907 1-deoxy-D-xylulose 5-phosphate synthaseRecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; EC=2.2.1.7; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS; chromosome CDS867518 1914 - 0.353187
accA PMM0534 acetyl-CoA carboxylase, alpha subunitRecName: Full=Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Short=ACCase subunit alpha; Short=Acetyl-CoA carboxylase carboxyltransferase subunit alpha; EC=6.4.1.2; chromosome CDS505501 1008 + 0.366071
accB,fabE PMM0027 Biotin / Lipoyl attachment:Acetyl-CoA biotin carboxyl carrier subunitSubName: Full=Biotin / Lipoyl attachment:Acetyl-CoA biotin carboxyl carrier subunit; chromosome CDS27847 507 + 0.351085
accC, fabG PMM0060 acetyl-CoA carboxylase, biotin carboxylase subunitSubName: Full=Acetyl-CoA carboxylase, biotin carboxylase subunit; EC=6.3.4.14; chromosome CDS65841 1350 + 0.37037
accD PMM0784 acetyl-CoA carboxylase, beta subunitRecName: Full=Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; Short=ACCase subunit beta; Short=Acetyl-CoA carboxylase carboxyltransferase subunit beta; EC=6.4.1.2; chromosome CDS745688 879 - 0.350398
acpP,acp PMM1608 acyl carrier protein (ACP)RecName: Full=Acyl carrier protein; Short=ACP; chromosome CDS1538208 243 + 0.374486
acs PMM0619 acetyl-coenzyme A synthetaseRecName: Full=Acetyl-coenzyme A synthetase; Short=AcCoA synthetase; Short=Acs; EC=6.2.1.1; AltName: Full=Acetate--CoA ligase; AltName: Full=Acyl-activating enzyme; chromosome CDS589700 1983 + 0.357035
crtB,pys PMM0143 Squalene and phytoene synthasesSubName: Full=Squalene and phytoene synthases; EC=2.5.1.-; chromosome CDS139518 909 - 0.327833
des,yocE PMM1378 Fatty acid desaturase, type 2SubName: Full=Fatty acid desaturase, type 2; EC=1.14.99.-; chromosome CDS1325388 1107 + 0.279133
des9 PMM1672 Fatty acid desaturase, type 1SubName: Full=Fatty acid desaturase, type 1; EC=1.14.19.1; chromosome CDS1604745 987 + 0.35461
dxr PMM1142 1-deoxy-D-xylulose 5-phosphate reductoisomeraseRecName: Full=1-deoxy-D-xylulose 5-phosphate reductoisomerase; Short=DXP reductoisomerase; EC=1.1.1.267; AltName: Full=1-deoxyxylulose-5-phosphate reductoisomerase; AltName: Full=2-C-methyl-D-erythritol 4-phosphate synthase; chromosome CDS1094783 1215 + 0.353086
fabD PMM0137 Malonyl coenzyme A-acyl carrier protein transacylaseRecName: Full=Malonyl CoA-acyl carrier protein transacylase; EC=2.3.1.39; chromosome CDS135371 897 + 0.315496
fabF PMM1609 3-oxoacyl-[acyl-carrier-protein] synthase IIRecName: Full=3-oxoacyl-[acyl-carrier-protein] synthase 2; EC=2.3.1.179; chromosome CDS1538457 1245 + 0.4
fabG PMM0453 3-oxoacyl-[acyl-carrier protein] reductaseSubName: Full=3-oxoacyl-[acyl-carrier protein] reductase; EC=1.1.1.100; chromosome CDS432615 750 - 0.324
fabH PMM0136 3-oxoacyl-[acyl-carrier-protein] synthase IIIRecName: Full=3-oxoacyl-[acyl-carrier-protein] synthase 3; EC=2.3.1.180; AltName: Full=3-oxoacyl-[acyl-carrier-protein] synthase III; AltName: Full=Beta-ketoacyl-ACP synthase III; Short=KAS III; chromosome CDS134349 1008 + 0.335317
fabI PMM0282 enoyl-[acyl-carrier-protein] reductaseRecName: Full=Enoyl-[acyl-carrier-protein] reductase [NADH]; EC=1.3.1.9; chromosome CDS271785 783 - 0.390805
fadD PMM0402 putative long-chain-fatty-acid--CoA ligaseSubName: Full=Putative long-chain-fatty-acid--CoA ligase; EC=6.2.1.3; chromosome CDS379757 1926 + 0.296989
gcpE PMM0676 GcpE proteinRecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; EC=1.17.7.1; AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; chromosome CDS643694 1218 + 0.357143
ispD PMM0454 putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferaseRecName: Full=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; EC=2.7.7.60; AltName: Full=4-diphosphocytidyl-2C-methyl-D-erythritol synthase; AltName: Full=MEP cytidylyltransferase; Short=MCT; chromosome CDS433458 672 + 0.324405
ispE PMM0932 Putative 4-diphosphocytidyl-2C-methyl-D-erythritol kinase (CMK)RecName: Full=4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Short=CMK; EC=2.7.1.148; AltName: Full=4-(cytidine-5-diphospho)-2-C-methyl-D-erythritol kinase; chromosome CDS892101 939 - 0.28115
lytB PMM0264 LytB protein homologRecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase; EC=1.17.1.2; chromosome CDS254182 1197 + 0.319967
menE PMM0174 probable O-succinylbenzoic acid--CoA ligase (OSB-CoA synthetase)SubName: Full=Probable O-succinylbenzoic acid--CoA ligase (OSB-CoA synthetase); EC=6.2.1.26; chromosome CDS167587 1218 - 0.259442
pgsA PMM0798 CDP-diacylglycerol-glycerol-3-phosphate3-phospha tidyltransferaseSubName: Full=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase; EC=2.7.8.5; chromosome CDS758743 543 - 0.246777
plsC PMM0138 putative 1-acyl-sn-glycerol-3-phosphate acyltransferaseSubName: Full=Putative 1-acyl-sn-glycerol-3-phosphate acyltransferase; EC=2.3.1.51; chromosome CDS136272 621 + 0.294686
plsX PMM0135 fatty acid/phospholipid synthesis protein PlsXRecName: Full=Phosphate acyltransferase; EC=2.3.1.n2; AltName: Full=Acyl-ACP phosphotransacylase; AltName: Full=Acyl-[acyl-carrier-protein]--phosphate acyltransferase; AltName: Full=Phosphate-acyl-ACP acyltransferase; chromosome CDS132895 1401 + 0.353319
por, pcr PMM0634 possible light-dependent protochlorophyllide oxido-reductaseSubName: Full=Possible light-dependent protochlorophyllide oxido-reductase; chromosome CDS603027 1002 + 0.243513
por, pcr PMM0542 Light dependent protochlorophyllide oxido-reductaseSubName: Full=Light dependent protochlorophyllide oxido-reductase; EC=1.3.1.33; chromosome CDS511465 1005 + 0.323383
som PMM1121 possible porinSubName: Full=Possible porin; Flags: Precursor; chromosome CDS1068274 1146 - 0.411867
som PMM1119 possible porinSubName: Full=Possible porin; Flags: Precursor; chromosome CDS1065058 1143 - 0.410324
uppS PMM1092 Undecaprenyl pyrophosphate synthetase (UPPS)RecName: Full=Isoprenyl transferase; EC=2.5.1.-; chromosome CDS1037562 819 + 0.29304