Gene list
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COG category: Lipid transport and metabolism
Organism: Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, Hildenborough
Number of genes found: 49
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Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, Hildenborough | |||||||||
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Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | DVU2562 | acyl carrier protein, putative | SubName: Full=Acyl carrier protein, putative; | chromosome | CDS | 2673960 | 408 | + | 0.64951 |
NA | DVU2226 | acetyl-CoA carboxylase, biotin carboxylase, putative | SubName: Full=Acetyl-CoA carboxylase, biotin carboxylase, putative; | chromosome | CDS | 2318897 | 1416 | - | 0.633475 |
NA | DVU0528 | phosphatidylglycerophosphatase | RecName: Full=Phosphatidylglycerophosphatase A; EC=3.1.3.27; AltName: Full=Phosphatidylglycerolphosphate phosphatase A; | chromosome | CDS | 601058 | 480 | + | 0.675 |
NA | DVU2224 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2315899 | 651 | - | 0.603687 |
NA | DVU3065 | AMP-binding enzyme family protein | SubName: Full=AMP-binding enzyme family protein; | chromosome | CDS | 3200598 | 1653 | - | 0.628554 |
NA | DVU2563 | beta-ketoacyl synthase, putative | SubName: Full=Beta-ketoacyl synthase, putative; | chromosome | CDS | 2674645 | 1449 | + | 0.706004 |
NA | DVU2162 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2263256 | 330 | - | 0.7 |
NA | DVU2979 | phosphatidylserine decarboxylase-related protein | RecName: Full=Phosphatidylserine decarboxylase proenzyme; EC=4.1.1.65; Contains: RecName: Full=Phosphatidylserine decarboxylase alpha chain; Contains: RecName: Full=Phosphatidylserine decarboxylase beta chain; | chromosome | CDS | 3086199 | 654 | + | 0.637615 |
NA | DVU3157 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3313723 | 1443 | + | 0.652807 |
NA | DVU3137 | oxidoreductase, short chain dehydrogenase/reductase family | SubName: Full=Oxidoreductase, short chain dehydrogenase/reductase family; | chromosome | CDS | 3284721 | 777 | + | 0.611326 |
NA | DVU1215 | PAP2 family protein | SubName: Full=PAP2 family protein; | chromosome | CDS | 1305895 | 657 | - | 0.592085 |
NA | DVU1548 | outer membrane transport protein, OmpP1/FadL/TodX family | SubName: Full=Outer membrane transport protein, OmpP1/FadL/TodX family; | chromosome | CDS | 1623964 | 1215 | + | 0.595062 |
NA | DVU1260 | outer membrane protein P1, putative | SubName: Full=Outer membrane protein P1, putative; | chromosome | CDS | 1346657 | 1284 | + | 0.588006 |
NA | DVU2250 | AMP-binding protein | SubName: Full=AMP-binding protein; | chromosome | CDS | 2344952 | 1656 | - | 0.643116 |
NA | DVU3119 | AMP-binding enzyme family protein | SubName: Full=AMP-binding enzyme family protein; | chromosome | CDS | 3267630 | 1695 | + | 0.628319 |
NA | DVU2560 | conserved domain protein | SubName: Full=Conserved domain protein; | chromosome | CDS | 2672449 | 387 | + | 0.643411 |
NA | DVU1168 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1260521 | 417 | - | 0.594724 |
NA | DVU1688 | 1-acyl-sn-glycerol-3-phosphate acyltransferase, putative | SubName: Full=1-acyl-sn-glycerol-3-phosphate acyltransferase, putative; | chromosome | CDS | 1766799 | 810 | + | 0.564198 |
NA | DVU2541 | CoA-substrate-specific enzyme activase, putative | SubName: Full=CoA-substrate-specific enzyme activase, putative; | chromosome | CDS | 2652642 | 810 | - | 0.669136 |
NA | DVU3090 | outer membrane protein, OMPP1/FadL/TodX family | SubName: Full=Outer membrane protein, OMPP1/FadL/TodX family; | chromosome | CDS | 3232587 | 1206 | - | 0.640133 |
NA | DVU2225 | acetyl-CoA carboxylase, carboxyl transferase, alpha/beta subunit | SubName: Full=Acetyl-CoA carboxylase, carboxyl transferase, alpha/beta subunit; EC=6.4.1.2; | chromosome | CDS | 2316568 | 2256 | - | 0.636525 |
NA | DVU1929 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2003220 | 198 | + | 0.60101 |
NA | DVU3239 | PAP2 family protein | SubName: Full=PAP2 family protein; | chromosome | CDS | 3410195 | 666 | - | 0.678679 |
NA | DVU0159 | thioesterase family protein | SubName: Full=Thioesterase family protein; EC=3.1.2.-; | chromosome | CDS | 196600 | 522 | - | 0.666667 |
NA | DVU2969 | acetoacetyl-CoA synthase | RecName: Full=Acetyl-coenzyme A synthetase; Short=AcCoA synthetase; Short=Acs; EC=6.2.1.1; AltName: Full=Acetate--CoA ligase; AltName: Full=Acyl-activating enzyme; | chromosome | CDS | 3075266 | 1986 | - | 0.655589 |
NA | DVU2561 | oxidoreductase, short chain dehydrogenase/reductase family | SubName: Full=Oxidoreductase, short chain dehydrogenase/reductase family; | chromosome | CDS | 2672832 | 1029 | + | 0.688047 |
acpD | DVU2548 | acyl carrier protein phosphodiesterase | RecName: Full=FMN-dependent NADH-azoreductase; EC=1.7.-.-; AltName: Full=Azo-dye reductase; AltName: Full=FMN-dependent NADH-azo compound oxidoreductase; | chromosome | CDS | 2660668 | 630 | - | 0.631746 |
acpP | DVU1205 | acyl carrier protein | RecName: Full=Acyl carrier protein; Short=ACP; | chromosome | CDS | 1297077 | 231 | - | 0.528139 |
acpS | DVU1909 | holo-(acyl-carrier-protein) synthase | RecName: Full=Holo-[acyl-carrier-protein] synthase; Short=Holo-ACP synthase; EC=2.7.8.7; AltName: Full=4-phosphopantetheinyl transferase AcpS; | chromosome | CDS | 1984465 | 375 | + | 0.661333 |
acs | DVU0748 | acetyl-CoA synthetase | SubName: Full=Acetyl-CoA synthetase; EC=6.2.1.1; | chromosome | CDS | 837106 | 1947 | - | 0.657935 |
cdsA | DVU0868 | phosphatidate cytidylyltransferase | RecName: Full=Phosphatidate cytidylyltransferase; EC=2.7.7.41; | chromosome | CDS | 961117 | 807 | - | 0.651797 |
cls | DVU0424 | cardiolipin synthetase | SubName: Full=Cardiolipin synthetase; EC=2.7.8.-; | chromosome | CDS | 479096 | 1446 | + | 0.637621 |
dxr | DVU0866 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase | RecName: Full=1-deoxy-D-xylulose 5-phosphate reductoisomerase; Short=DXP reductoisomerase; EC=1.1.1.267; AltName: Full=1-deoxyxylulose-5-phosphate reductoisomerase; AltName: Full=2-C-methyl-D-erythritol 4-phosphate synthase; | chromosome | CDS | 958392 | 1227 | - | 0.661777 |
dxs | DVU1350 | 1-deoxy-D-xylulose-5-phosphate synthase | RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; EC=2.2.1.7; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS; | chromosome | CDS | 1427612 | 1926 | + | 0.640706 |
fabD | DVU1249 | malonyl CoA-acyl carrier protein transacylase | RecName: Full=Malonyl CoA-acyl carrier protein transacylase; EC=2.3.1.39; | chromosome | CDS | 1335876 | 954 | - | 0.658281 |
fabF | DVU1204 | 3-oxoacyl-(acyl-carrier-protein) synthase II | RecName: Full=3-oxoacyl-[acyl-carrier-protein] synthase 2; EC=2.3.1.179; | chromosome | CDS | 1295642 | 1248 | - | 0.624199 |
fabG | DVU1206 | 3-oxoacyl-(acyl-carrier-protein) reductase | SubName: Full=3-oxoacyl-(Acyl-carrier-protein) reductase; EC=1.1.1.100; | chromosome | CDS | 1297364 | 744 | - | 0.642473 |
fabH | DVU1207 | 3-oxoacyl-(acyl-carrier-protein) synthase III | RecName: Full=3-oxoacyl-[acyl-carrier-protein] synthase 3; EC=2.3.1.180; AltName: Full=3-oxoacyl-[acyl-carrier-protein] synthase III; AltName: Full=Beta-ketoacyl-ACP synthase III; Short=KAS III; | chromosome | CDS | 1298192 | 993 | - | 0.657603 |
fabI | DVU0794 | enoyl-(acyl-carrier-protein) reductase | RecName: Full=Enoyl-[acyl-carrier-protein] reductase [NADH]; EC=1.3.1.9; | chromosome | CDS | 879315 | 765 | - | 0.60915 |
fabZ | DVU2368 | beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ | RecName: Full=3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ; EC=4.2.1.59; AltName: Full=(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; Short=(3R)-hydroxymyristoyl-ACP dehydrase; AltName: Full=Beta-hydroxyacyl-ACP dehydratase; | chromosome | CDS | 2464274 | 465 | - | 0.597849 |
fadD | DVU1453 | long-chain-fatty-acid--CoA ligase | SubName: Full=Long-chain-fatty-acid--CoA ligase; EC=6.2.1.3; | chromosome | CDS | 1530755 | 1695 | - | 0.612979 |
ispD | DVU1454 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | RecName: Full=Bifunctional enzyme IspD/IspF; Includes: RecName: Full=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; EC=2.7.7.60; AltName: Full=4-diphosphocytidyl-2C-methyl-D-erythritol synthase; AltName: Full=MEP cytidylyltransferase; Short=MCT; Includes: RecName: Full=2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Short=MECDP-synthase; Short=MECPP-synthase; Short=MECPS; EC=4.6.1.12; | chromosome | CDS | 1532607 | 1188 | - | 0.647306 |
ispE | DVU1576 | 4-diphosphocytidyl-2C-methyl-D-erythritol kinase | RecName: Full=4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Short=CMK; EC=2.7.1.148; AltName: Full=4-(cytidine-5-diphospho)-2-C-methyl-D-erythritol kinase; | chromosome | CDS | 1658357 | 861 | - | 0.623693 |
ispG | DVU1344 | 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase | RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; EC=1.17.7.1; AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; | chromosome | CDS | 1421161 | 1161 | + | 0.633936 |
ispH | DVU0055 | hydroxymethylbutenyl pyrophosphate reductase | RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase; EC=1.17.1.2; | chromosome | CDS | 61763 | 873 | + | 0.657503 |
pgsA | DVU1846 | CDP-diacylglycerol--glycerol-3-phosphate3-phosph atidyltransferase | SubName: Full=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; EC=2.7.8.5; | chromosome | CDS | 1915111 | 558 | - | 0.548387 |
plsX | DVU1208 | fatty acid/phospholipid synthesis protein PlsX | RecName: Full=Phosphate acyltransferase; EC=2.3.1.n2; AltName: Full=Acyl-ACP phosphotransacylase; AltName: Full=Acyl-[acyl-carrier-protein]--phosphate acyltransferase; AltName: Full=Phosphate-acyl-ACP acyltransferase; | chromosome | CDS | 1299241 | 1038 | - | 0.619461 |
pssA | DVU2980 | CDP-diacylglycerol--serineO-phosphatidyltransferase | SubName: Full=CDP-diacylglycerol--serine O-phosphatidyltransferase; EC=2.7.8.8; | chromosome | CDS | 3086915 | 750 | + | 0.608 |
uppS | DVU0869 | undecaprenyl diphosphate synthase | RecName: Full=Isoprenyl transferase; EC=2.5.1.-; | chromosome | CDS | 961920 | 744 | - | 0.630376 |