Gene list
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COG category: Lipid transport and metabolism
Organism: Treponema denticola ATCC 35405, ATCC 35405
Number of genes found: 47
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Treponema denticola ATCC 35405, ATCC 35405 | |||||||||
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Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | TDE1742 | AMP-binding enzyme family protein | SubName: Full=AMP-binding enzyme family protein; | chromosome | CDS | 1795743 | 1926 | - | 0.406023 |
NA | TDE0040 | AMP-binding protein | SubName: Full=AMP-binding protein; | chromosome | CDS | 45866 | 1653 | - | 0.437992 |
NA | TDE1413 | cytidylyltransferase/phosphoenolpyruvate phosphomutase, putative | SubName: Full=Cytidylyltransferase/phosphoenolpyruvate phosphomutase, putative; | chromosome | CDS | 1455650 | 1302 | + | 0.418587 |
NA | TDE0521 | carboxylesterase family protein | SubName: Full=Carboxylesterase family protein; | chromosome | CDS | 566846 | 1497 | - | 0.350701 |
NA | TDE0601 | malonyl CoA-acyl carrier protein transacylase, putative | RecName: Full=Malonyl CoA-acyl carrier protein transacylase; EC=2.3.1.39; | chromosome | CDS | 638924 | 978 | - | 0.468303 |
NA | TDE2717 | phosphatidate cytidylyltransferase, putative | SubName: Full=Phosphatidate cytidylyltransferase, putative; | chromosome | CDS | 2774011 | 627 | - | 0.405104 |
NA | TDE2016 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2037914 | 1071 | - | 0.296919 |
NA | TDE2146 | hydrolase, alpha/beta fold family | SubName: Full=Hydrolase, alpha/beta fold family; | chromosome | CDS | 2183200 | 915 | + | 0.389071 |
NA | TDE1366 | CDP-alcohol phosphatidyltransferase family protein | SubName: Full=CDP-alcohol phosphatidyltransferase family protein; | chromosome | CDS | 1408498 | 582 | + | 0.235395 |
NA | TDE2209 | CarB family protein | SubName: Full=CarB family protein; | chromosome | CDS | 2247729 | 1632 | + | 0.444853 |
NA | TDE0685 | oxidoreductase, short chain dehydrogenase/reductase family | SubName: Full=Oxidoreductase, short chain dehydrogenase/reductase family; | chromosome | CDS | 721913 | 798 | - | 0.414787 |
NA | TDE1787 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1826468 | 258 | - | 0.282946 |
NA | TDE0021 | CDP-alcohol phosphatidyltransferase family protein | SubName: Full=CDP-alcohol phosphatidyltransferase family protein; | chromosome | CDS | 26954 | 1002 | + | 0.336327 |
NA | TDE1000 | 3-hydroxyacid dehydrogenase family protein | SubName: Full=3-hydroxyacid dehydrogenase family protein; | chromosome | CDS | 1026903 | 879 | + | 0.441411 |
NA | TDE2186 | AMP-binding enzyme family protein | SubName: Full=AMP-binding enzyme family protein; | chromosome | CDS | 2219488 | 1656 | + | 0.396739 |
NA | TDE2263 | acetyl hydrolase, putative | SubName: Full=Acetyl hydrolase, putative; | chromosome | CDS | 2299367 | 915 | - | 0.414208 |
NA | TDE0942 | long-chain-fatty-acid--CoA ligase, putative | SubName: Full=Long-chain-fatty-acid--CoA ligase, putative; | chromosome | CDS | 964272 | 1728 | + | 0.418981 |
NA | TDE0610 | 3-hydroxyacyl-CoA dehydrogenase, putative | SubName: Full=3-hydroxyacyl-CoA dehydrogenase, putative; | chromosome | CDS | 646447 | 930 | - | 0.423656 |
NA | TDE2181 | PAP2 family protein | SubName: Full=PAP2 family protein; | chromosome | CDS | 2212085 | 1041 | - | 0.385207 |
NA | TDE0823 | (3R)-hydroxymyristoyl-(acyl-carrier-protein) dehydratase, putative | SubName: Full=(3R)-hydroxymyristoyl-(Acyl-carrier-protein) dehydratase, putative; | chromosome | CDS | 844881 | 432 | + | 0.446759 |
NA | TDE2669 | CDP-alcohol phosphatidyltransferase family protein | SubName: Full=CDP-alcohol phosphatidyltransferase family protein; | chromosome | CDS | 2706251 | 783 | - | 0.312899 |
NA | TDE1989 | acyltransferase family protein | SubName: Full=Acyltransferase family protein; | chromosome | CDS | 2005675 | 759 | - | 0.428195 |
NA | TDE2218 | conserved domain protein | SubName: Full=Conserved domain protein; | chromosome | CDS | 2258160 | 903 | + | 0.386489 |
NA | TDE1695 | CoA-substrate-specific enzyme activase domain protein | SubName: Full=CoA-substrate-specific enzyme activase domain protein; | chromosome | CDS | 1749588 | 4503 | - | 0.427493 |
accA | TDE0589 | acetyl-CoA carboxylase, carboxyl transferase, alpha subunit | RecName: Full=Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Short=ACCase subunit alpha; Short=Acetyl-CoA carboxylase carboxyltransferase subunit alpha; EC=6.4.1.2; | chromosome | CDS | 628217 | 918 | - | 0.46732 |
accB | TDE0592 | acetyl-CoA carboxylase, biotin carboxyl carrier protein | SubName: Full=Acetyl-CoA carboxylase, biotin carboxyl carrier protein; | chromosome | CDS | 631453 | 576 | - | 0.486111 |
accC | TDE0591 | acetyl-CoA carboxylase, biotin carboxylase | SubName: Full=Acetyl-CoA carboxylase, biotin carboxylase; EC=6.4.1.2; | chromosome | CDS | 630123 | 1320 | - | 0.480303 |
accD | TDE0590 | acetyl-CoA carboxylase, carboxyl transferase, beta subunit | RecName: Full=Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; Short=ACCase subunit beta; Short=Acetyl-CoA carboxylase carboxyltransferase subunit beta; EC=6.4.1.2; | chromosome | CDS | 629155 | 792 | - | 0.465909 |
acpP | TDE1026 | acyl carrier protein | RecName: Full=Acyl carrier protein; Short=ACP; | chromosome | CDS | 1057442 | 237 | + | 0.379747 |
acpS | TDE1907 | holo-(acyl-carrier-protein) synthase | RecName: Full=Holo-[acyl-carrier-protein] synthase; Short=Holo-ACP synthase; EC=2.7.8.7; AltName: Full=4-phosphopantetheinyl transferase AcpS; | chromosome | CDS | 1924816 | 372 | - | 0.456989 |
cdsA | TDE2343 | phosphatidate cytidylyltransferase | SubName: Full=Phosphatidate cytidylyltransferase; EC=2.7.7.41; | chromosome | CDS | 2380473 | 858 | - | 0.371795 |
dxr | TDE2342 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase | RecName: Full=1-deoxy-D-xylulose 5-phosphate reductoisomerase; Short=DXP reductoisomerase; EC=1.1.1.267; AltName: Full=1-deoxyxylulose-5-phosphate reductoisomerase; AltName: Full=2-C-methyl-D-erythritol 4-phosphate synthase; | chromosome | CDS | 2379328 | 1146 | - | 0.405759 |
dxs | TDE1910 | 1-deoxy-D-xylulose-5-phosphate synthase | RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; EC=2.2.1.7; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS; | chromosome | CDS | 1926966 | 1962 | - | 0.420999 |
fabF | TDE0038 | 3-oxoacyl-(acyl-carrier-protein) synthase II | RecName: Full=3-oxoacyl-[acyl-carrier-protein] synthase 2; EC=2.3.1.179; | chromosome | CDS | 43126 | 1236 | - | 0.476537 |
fabG | TDE0598 | 3-oxoacyl-(acyl-carrier-protein) reductase | SubName: Full=3-oxoacyl-(Acyl-carrier-protein) reductase; EC=1.1.1.100; | chromosome | CDS | 637448 | 744 | - | 0.467742 |
fabH | TDE0602 | 3-oxoacyl-(acyl-carrier-protein) synthase III | RecName: Full=3-oxoacyl-[acyl-carrier-protein] synthase 3; EC=2.3.1.180; AltName: Full=3-oxoacyl-[acyl-carrier-protein] synthase III; AltName: Full=Beta-ketoacyl-ACP synthase III; | chromosome | CDS | 639926 | 936 | - | 0.45406 |
grdC | TDE0240 | glycine reductase complex protein GrdC | SubName: Full=Glycine reductase complex protein GrdC; | chromosome | CDS | 273085 | 1539 | - | 0.458739 |
grdD | TDE0239 | glycine reductase complex protein GrdD | SubName: Full=Glycine reductase complex protein GrdD; | chromosome | CDS | 271918 | 1155 | - | 0.493506 |
hgdC | TDE0387 | (R)-hydroxyglutaryl-CoA dehydratase activator | SubName: Full=(R)-hydroxyglutaryl-CoA dehydratase activator; | chromosome | CDS | 438567 | 750 | + | 0.426667 |
ispD | TDE2291 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | SubName: Full=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; | chromosome | CDS | 2328230 | 732 | + | 0.394809 |
ispE | TDE1338 | 4-diphosphocytidyl-2C-methyl-D-erythritol kinase | RecName: Full=4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Short=CMK; EC=2.7.1.148; AltName: Full=4-(cytidine-5-diphospho)-2-C-methyl-D-erythritol kinase; | chromosome | CDS | 1375029 | 855 | + | 0.397661 |
ispF | TDE2292 | 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | RecName: Full=2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Short=MECDP-synthase; Short=MECPP-synthase; Short=MECPS; EC=4.6.1.12; | chromosome | CDS | 2328958 | 486 | + | 0.411523 |
ispG | TDE1265 | 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase | RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; EC=1.17.7.1; AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; | chromosome | CDS | 1299363 | 1164 | - | 0.431271 |
ispH | TDE1096 | hydroxymethylbutenyl pyrophosphate reductase | RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase; EC=1.17.1.2; | chromosome | CDS | 1131129 | 870 | + | 0.389655 |
mamA | TDE1023 | methylaspartate mutase, S subunit | RecName: Full=Glutamate mutase sigma subunit; EC=5.4.99.1; AltName: Full=Glutamate mutase S chain; AltName: Full=Glutamate mutase small subunit; AltName: Full=Methylaspartate mutase; | chromosome | CDS | 1055263 | 420 | + | 0.402381 |
pgsA | TDE2572 | CDP-diacylglycerol--glycerol-3-phosphate3-phosph atidyltransferase | SubName: Full=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; EC=2.7.8.5; | chromosome | CDS | 2598235 | 594 | - | 0.377104 |
uppS | TDE2344 | undecaprenyl diphosphate synthase | RecName: Full=Isoprenyl transferase; EC=2.5.1.-; | chromosome | CDS | 2381352 | 684 | - | 0.390351 |