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2024-04-29 18:01:34

Gene list

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COG category: Lipid transport and metabolism
Organism: Phage Gifsy-1

Number of genes found: 96

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Phage Gifsy-1
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SC2018 putative cytoplasmic proteinchromosome CDS2114698 327 - 0.409786
NA SC3117 1-acyl-sn-glycerol-3-phosphate acyltransferasechromosome CDS3296715 738 - 0.501355
NA SC2592 putative exported proteinchromosome CDS2758895 336 - 0.46131
NA SC3524 putative phosphatasechromosome CDS3720295 1272 - 0.550314
NA SC0097 hypothetical proteinchromosome CDS113546 300 + 0.573333
aas SC2949 2-acylglycerophospho-ethanolamine acyl transferase/acyl-acyl carrier protein synthetasechromosome CDS3127565 2160 - 0.548148
accA SC0232 acetylCoA carboxylase, carboxytransferase component, alpha subunitchromosome CDS269037 960 + 0.548958
accB SC3317 acetylCoA carboxylase, BCCP subunit, carrier of biotinchromosome CDS3504829 471 + 0.526539
accC SC3318 acetyl CoA carboxylase, biotin carboxylase subunitchromosome CDS3505310 1350 + 0.548889
accD SC2368 acetylCoA carboxylase, beta subunitchromosome CDS2493100 993 - 0.561934
acdC SC0851 putative acyl-CoA dehydrogenasechromosome CDS955128 1164 + 0.430412
acp SC1144 Acyl carrier protein (ACP)chromosome CDS1260171 237 + 0.476793
acpD SC1637 acyl carrier protein phosphodiesterasechromosome CDS1748593 606 + 0.534653
acpS SC2572 holo-[acyl-carrier-protein] synthase, subunit (CoA:apo-[acyl-carrier-protein] pantetheinephosphotransferase, phosphopanthetheinyltransferase)chromosome CDS2742524 381 - 0.569554
acs SC4154 acetyl-CoA synthetasechromosome CDS4448325 1959 - 0.565595
aes SC0532 acetyl esterasechromosome CDS592231 972 - 0.5607
aidB SC4251 putative acyl-CoA dehydrogenase; adaptive response (transcription activated by Ada)chromosome CDS4554307 1623 + 0.561922
apeE SC0608 outer membrane N-acetyl phenylalanine beta-naphthyl ester-cleaving esterasechromosome CDS677345 1971 + 0.55657
bah SC3920 putative acetyl esterasechromosome CDS4173786 678 - 0.573746
caiA SC0067 putative acyl-CoA dehydrogenase, carnitine metabolismchromosome CDS79590 1143 - 0.525809
caiC SC0065 crotonobetaine/carnitine-CoA ligasechromosome CDS76645 1554 - 0.51094
caiD SC0064 carnitine racemasechromosome CDS75806 786 - 0.561069
cdsA SC0222 CDP-diglyceride synthasechromosome CDS256147 828 + 0.531401
citX SC0649 putative cytoplasmic proteinchromosome CDS725825 552 - 0.61413
citX2 SC0056 putative cytoplasmic proteinchromosome CDS66707 501 + 0.55489
cls SC1735 cardiolipin synthasechromosome CDS1845993 1461 + 0.537988
csgE SC1089 curli production assembly/transport component, 2nd curli operonchromosome CDS1209413 396 - 0.444444
dxr SC0220 1-deoxy-D-xylulose 5-phosphate reductoisomerasechromosome CDS253894 1140 + 0.561404
dxs SC0463 1-deoxyxylulose-5-phosphate synthase; flavoproteinchromosome CDS519044 1863 - 0.553409
entA SC0629 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenasechromosome CDS702475 756 + 0.583333
fabA SC1019 beta-hydroxydecanoyl thioester dehydrase (trans-2-decenoyl-ACP isomerase)chromosome CDS1138522 519 - 0.533719
fabB SC2380 3-oxoacyl-[acyl-carrier-protein] synthase Ichromosome CDS2503032 1215 - 0.571193
fabD SC1142 malonyl-CoA-[acyl-carrier-protein] transacylasechromosome CDS1258339 930 + 0.563441
fabF SC1145 3-oxoacyl-[acyl-carrier-protein] synthase IIchromosome CDS1260493 1242 + 0.550725
fabG SC1143 3-oxoacyl-[acyl-carrier-protein] reductasechromosome CDS1259281 735 + 0.50068
fabH SC1141 3-oxoacyl-[acyl-carrier-protein] synthase III; acetylCoA ACP transacylasechromosome CDS1257370 954 + 0.54717
fabI SC1694 enoyl-[acyl-carrier-protein] reductase (NADH)chromosome CDS1805267 789 + 0.541191
fabZ SC0227 (3R)-hydroxymyristol acyl carrier protein dehydratasechromosome CDS262440 546 + 0.505495
fadA SC3879 3-ketoacyl-CoA thiolase; (thiolase I, acetyl-CoA transferase), in complex with FadB catalyzes EC 23.1.16 reactionchromosome CDS4122369 1164 - 0.585911
fadB SC3880 3-hydroxyacyl-coA dehydrogenase of 4-enzyme FadB proteinchromosome CDS4123542 2316 - 0.549655
fadD SC1811 acyl-CoA synthetase (long-chain-fatty-acid--CoA ligase)chromosome CDS1930394 1542 - 0.523995
fadL SC2393 transport of long-chain fatty acids; sensitivity to phage T2chromosome CDS2516799 1314 + 0.532724
garR SC3195 tartronate semialdehyde reductase (TSAR)chromosome CDS3377836 891 - 0.565657
gcpE SC2520 putative protein, involved in density-dependent regulation of peptidoglycan biosynthesischromosome CDS2676936 1119 - 0.548704
glxR SC0559 tartronic semialdehyde reductasechromosome CDS624503 879 + 0.510808
iacp SC2813 putative acyl carrier proteinchromosome CDS2977940 249 - 0.389558
idi SC2979 isopentenyldiphosphate isomerasechromosome CDS3156770 546 + 0.521978
idnO SC4339 5-keto-D-gluconate-5-reductasechromosome CDS4641150 765 - 0.534641
ipk SC1773 isopentenyl monophosphate kinasechromosome CDS1889624 852 + 0.549296
ispD SC2862 4-phosphocytidyl-2C-methyl-D-erythritol synthasechromosome CDS3025667 711 - 0.578059
ispF SC2861 2C-methyl-d-erythritol-2,4-cyclodiphosphatesynth asechromosome CDS3025188 480 - 0.566667
kduD SC2956 2-deoxy-D-gluconate 3-dehydrogenasechromosome CDS3137265 762 - 0.515748
lytB SC0043 regulates the activity of guanosine 3',5'-bispyrophosphate synthetase I (RelA)chromosome CDS52050 951 + 0.576236
maoC SC3059 putative monoamine oxidasechromosome CDS3237662 528 - 0.498106
menE SC2305 o-succinylbenzoate-CoA ligasechromosome CDS2425952 1368 - 0.597953
pduG SC2051 Propanediol utilization: diol dehydratase reactivationchromosome CDS2142598 1833 + 0.598472
pgpA SC0461 phosphatidylglycerophosphatase Achromosome CDS517394 516 + 0.540698
pgpB SC1705 phosphatidylglycerophosphate phosphatase Bchromosome CDS1816280 765 - 0.563399
pgsA SC1948 phosphatidylglycerophosphate synthetase (CDP-1,2-diacyl-sn-glycero-3-phosphate phosphatidyl transferase)chromosome CDS2058277 549 - 0.546448
phoN SC4197 non-specific acid phosphatasechromosome CDS4499817 753 - 0.447543
pldB SC3860 lysophospholipase L(2)chromosome CDS4100006 1113 + 0.540881
plsB SC4114 glycerolphosphate acyltransferase activitychromosome CDS4390797 2421 - 0.549773
plsX SC1140 putative fatty acid/phospholipid synthesis proteinchromosome CDS1256211 1080 + 0.535185
prpE SC0412 putative acetyl-CoA synthetase, propionate catabolism operonchromosome CDS466229 1887 + 0.589295
psd SC4227 phosphatidylserine decarboxylasechromosome CDS4527278 969 - 0.537668
pssA SC2657 phosphatidylserine synthase (CDP-diacylglycerol-serine O-phosphatidyltransferase)chromosome CDS2809875 1359 + 0.494481
sbmA SC0417 putative ABC superfamily transporterchromosome CDS474852 1221 + 0.522523
srlD SC2768 glucitol (sorbitol)-6-phosphate dehydrogenasechromosome CDS2934638 780 + 0.547436
sseJ SC1626 translocated effector: regulated by SPI-2chromosome CDS1734452 1227 + 0.391198
tesB SC0507 acyl-CoA thioesterase IIchromosome CDS566648 861 - 0.533101
ucpA SC2444 putative oxidoreductasechromosome CDS2572350 792 - 0.537879
uppS SC0221 undecaprenyl pyrophosphate synthetase (di-trans,poly-cis-decaprenylcistransferase)chromosome CDS255346 759 + 0.511199
ushB SC3955 CDP-diacylglycerol phosphotidylhydrolasechromosome CDS4207493 891 + 0.529742
wecF SC3833 TDP-Fuc4NAc:lipidII transferasechromosome CDS4072914 1359 + 0.523915
yafH SC0310 putative acyl-CoA dehydrogenasechromosome CDS356555 2445 - 0.559509
ybbO SC0546 putative oxidoreductasechromosome CDS609286 771 - 0.546044
ybhO SC0809 cardiolipin (CL) synthasechromosome CDS905708 1242 - 0.545894
ybjG SC0859 putative permeasechromosome CDS965321 675 - 0.540741
yciA SC1732 putative Acyl-CoA hydrolasechromosome CDS1843931 402 + 0.542289
yciK SC1714 putative oxoacyl-(acyl carrier protein) reductasechromosome CDS1827501 762 + 0.566929
ydiD SC1369 Homolog of a plant pathogenicity factorchromosome CDS1466297 1686 - 0.527877
ydiF SC1376 putative acetyl-CoA:acetoacetyl-CoA transferase beta subunitchromosome CDS1473975 1596 - 0.491228
ydiO SC1375 putative acyl-CoA dehydrogenasechromosome CDS1472810 1152 - 0.497396
yegS SC2155 putative diacylglycerol kinase catalytic domainchromosome CDS2256531 900 + 0.547778
yeiU SC2229 putative permeasechromosome CDS2336350 666 + 0.513514
yfcX SC2390 paral putative dehydrogenasechromosome CDS2512515 2148 - 0.538641
yfcY SC2391 paral putative acetyl-CoA acetyltransferasechromosome CDS2514662 1311 - 0.59344
yfjG SC2687 putative Oligoketide cyclase/lipid transport proteinchromosome CDS2843036 477 - 0.496855
ygbJ SC2848 3-hydroxyisobutyrate dehydrogenasechromosome CDS3014323 924 - 0.599567
yghA SC3099 putative oxidoreductasechromosome CDS3278037 885 + 0.564972
yhbT SC3214 putative lipid carrier proteinchromosome CDS3395559 525 - 0.512381
yihU SC3913 putative oxidoreductasechromosome CDS4167685 876 - 0.568493
yjgI SC1669 putative short-chain alcohol dehydrogenasechromosome CDS1781129 714 + 0.571429
ymdC SC1095 putative phospholipasechromosome CDS1213442 1587 + 0.534342
yohF SC2187 putative oxidoreductasechromosome CDS2290516 762 - 0.549869
yqeF SC2958 putative acetyl-CoA acetyltransferasechromosome CDS3139349 1161 - 0.587425