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2024-05-04 00:29:35

Gene list

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COG category: Lipid transport and metabolism
Organism: Pseudoalteromonas haloplanktis TAC125, TAC125

Number of genes found: 136

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Pseudoalteromonas haloplanktis TAC125, TAC125
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA PSHAa1343 putative oxoacyl-(acyl carrier protein) reductase with NAD(P)-binding domainchromosome I CDS1390421 747 - 0.409639
NA PSHAb0311 conserved protein of unknown functionchromosome II CDS361613 735 - 0.409524
NA PSHAa1313 putative protein with phospholipase D/nuclease domainchromosome I CDS1367343 1557 + 0.395633
NA PSHAa0291 putative glucose/ribitol dehydrogenase familychromosome I CDS305261 729 - 0.42524
NA PSHAa0907 putative butyryl-CoA dehydrogenasechromosome I CDS936781 1065 + 0.461972
NA PSHAa0891 2O-beta-hydroxysteroid dehydrogenasechromosome I CDS920435 789 - 0.453739
NA PSHAa0905 putative enoyl-CoA hydratasechromosome I CDS934845 753 + 0.458167
NA PSHAa1460 putative 3-oxoacyl-(acyl-carrier protein) reductasechromosome I CDS1539388 771 + 0.45655
NA PSHAa1451 beta subunit of a coenzyme A carboxylases family proteinchromosome I CDS1528894 1608 - 0.460821
NA PSHAb0392 putative acyltransferase family proteinchromosome II CDS451882 786 + 0.374046
NA PSHAa0056 putative RNA binding proteinchromosome I CDS58533 489 - 0.374233
NA PSHAa0888 putative acyl-CoA dehydrogenase family proteinchromosome I CDS916835 1170 + 0.448718
NA PSHAb0397 putative orphan proteinchromosome II CDS455119 360 + 0.402778
NA PSHAa0886 conserved protein of unknown functionchromosome I CDS915213 420 + 0.42619
NA PSHAa0903 putative enoyl-CoA hydratasechromosome I CDS932854 870 + 0.456322
NA PSHAa1999 conserved protein of unknown function ; putative SalDchromosome I CDS2109026 1272 + 0.415094
NA PSHAa1495 putative cytosolic long-chain acyl-CoA thioester hydrolase family proteinchromosome I CDS1571708 435 + 0.402299
NA PSHAa2943 putative succinyl-CoA transferase, alpha subunitchromosome I CDS3118266 708 - 0.454802
NA PSHAa0909 putative 3-oxoacyl-[acyl-carrier protein] reductasechromosome I CDS939008 882 + 0.485261
NA PSHAb0393 putative acyl carrier proteinchromosome II CDS452664 258 + 0.344961
NA PSHAa0901 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunitchromosome I CDS931158 876 + 0.445205
NA PSHAa0438 putative phytase domain proteinchromosome I CDS456754 1929 + 0.404355
NA PSHAa1456 Acyl-CoA dehydrogenase family proteinchromosome I CDS1535376 1158 + 0.462003
NA PSHAa1452 Isovaleryl-CoA dehydrogenasechromosome I CDS1530512 1176 - 0.434524
NA PSHAa1254 putative 2-hydroxy-3-oxopropionate reductasechromosome I CDS1308542 834 + 0.466427
NA PSHAa2481 putative enoyl-CoA hydratasechromosome I CDS2633409 735 - 0.37551
NA PSHAa0373 putative lysophospholipase L(2)chromosome I CDS389162 933 - 0.399786
NA PSHAa2128 putative acetyl-CoA acetyltransferase or Thiolasechromosome I CDS2249030 1206 + 0.461028
NA PSHAa2150 conserved protein of unknown function ; putative MaoC-like deshydratase domainchromosome I CDS2277697 462 - 0.430736
NA PSHAa0877 putative steroid degradation proteinchromosome I CDS905519 1221 + 0.423423
NA PSHAa2134 putative AMP-binding enzymechromosome I CDS2257114 1695 - 0.438348
NA PSHAb0396 putative AMP-dependent synthetase and ligasechromosome II CDS453756 1380 + 0.413043
NA PSHAa2131 putative acyl-CoA dehydrogenase family proteinchromosome I CDS2252510 1128 - 0.454787
NA PSHAa0889 putative acyl-CoA dehydrogenase family proteinchromosome I CDS918019 1200 + 0.445
NA PSHAa1269 putative fatty acid desaturasechromosome I CDS1324358 1053 + 0.397911
NA PSHAa2942 putative succinyl-CoA transferase, beta subunitchromosome I CDS3117598 657 - 0.449011
NA PSHAa0051 conserved protein of unknown function ; putative secreted esterasechromosome I CDS51509 1371 - 0.404814
NA PSHAb0226 putative CDP-alcohol phosphatidyltransferase or Phosphatidylglycerophosphate synthasechromosome II CDS265182 645 - 0.412403
NA PSHAa0567 conserved protein of unknown function ; putative sterol desaturase family proteinchromosome I CDS587875 813 + 0.382534
NA PSHAb0407 putative 3-oxoacyl-(Acyl-carrier-protein) synthasechromosome II CDS463903 1134 + 0.440035
NA PSHAa0885 putative acyl-CoA dehydrogenase family proteinchromosome I CDS914108 1134 + 0.462081
NA PSHAb0155 putative hydrolasechromosome II CDS190070 792 + 0.391414
NA PSHAa1719 Phosphatidylserine synthasechromosome I CDS1798214 1326 - 0.394419
NA PSHAa1457 Enoyl-CoA hydratase/carnithine racemasechromosome I CDS1536544 798 + 0.448622
NA PSHAa0896 putative very-long-chain acyl-CoA synthetasechromosome I CDS926059 1869 + 0.456929
NA PSHAa1449 urea carboxylase (alpha subunit)chromosome I CDS1526099 2004 - 0.447605
NA PSHAa1264 putative 3-oxoacyl-[acyl-carrier protein] reductasechromosome I CDS1320404 792 + 0.407828
NA PSHAa0908 putative acetyl-CoA C-acetyltransferasechromosome I CDS937842 1152 + 0.480035
NA PSHAa0842 conserved protein of unknown function (yfjG) ; highly conserved in gamma-proteobacteriachromosome I CDS871347 441 + 0.365079
NA PSHAb0414 putative membrane associated hydrolasechromosome II CDS471209 2247 + 0.402314
NA PSHAa0887 conserved protein of unknown function ; putative nonspecific lipid-transfer proteinchromosome I CDS915650 1176 + 0.443027
NA PSHAa0897 putative nonspecific lipid-transfer proteinchromosome I CDS927927 1212 + 0.476073
NA PSHAa0894 3-ketoacyl-acyl carrier protein reductasechromosome I CDS924651 744 + 0.47043
NA PSHAb0355 putative acyl-CoA thioesterase, TesB familychromosome II CDS414055 816 - 0.432598
NA PSHAa1450 putative enoyl-CoA hydratase/isomerasechromosome I CDS1528111 771 - 0.420233
NA PSHAa0879 putative 3-oxoacyl-[acyl-carrier-protein] reductasechromosome I CDS907915 771 + 0.476005
NA PSHAb0409 putative 3-oxoacyl-[acyl-carrier-protein] reductase (fabG-like)chromosome II CDS465586 636 + 0.474843
NA PSHAb0485 putative fragment of steroid dehydrogenasechromosome II CDS548276 144 - 0.451389
NA PSHAb0410 putative 3-oxoacyl-[acyl-carrier-protein] synthase II (fabF-like)chromosome II CDS466251 1200 + 0.453333
NA PSHAa0906 putative isovaleryl-CoA dehydrogenasechromosome I CDS935606 1164 + 0.478522
NA PSHAa1459 3-hydroxyisobutyrate dehydrogenasechromosome I CDS1538431 948 + 0.452532
NA PSHAa2151 putative reductase or dehydrogenase proteinchromosome I CDS2278167 786 - 0.474555
NA PSHAa1620 conserved protein of unknown function ; putative acyl-CoA thioester hydrolase family proteinchromosome I CDS1684615 465 + 0.4
NA PSHAa1458 Enoyl-CoA hydratase/isomerase family proteinchromosome I CDS1537341 1143 + 0.437445
NA PSHAa1885 putative 3-ketoacyl-acyl carrier protein reductase 1chromosome I CDS1987477 882 + 0.433107
NA PSHAa1394 putative long-chain-fatty-acid-CoA ligasechromosome I CDS1460928 1734 - 0.415802
NA PSHAa2130 putative acyl-CoA dehydrogenase family proteinchromosome I CDS2251291 1194 - 0.447236
NA PSHAb0225 putative C-5 sterol desaturasechromosome II CDS264398 738 - 0.441734
NA PSHAa0406 putative orphan protein ; putative acyltransferasechromosome I CDS423413 1569 + 0.318674
NA PSHAa0890 putative acyl-CoA dehydrogenase family proteinchromosome I CDS919218 1113 + 0.444744
NA PSHAa1791 conserved protein of unknown function ; putative membrane proteinchromosome I CDS1881925 1029 - 0.289602
NA PSHAa0717 putative Enoyl-CoA hydratase/isomerase family proteinchromosome I CDS751838 792 - 0.429293
NA PSHAa1382 putative beta-ketoacyl synthasechromosome I CDS1447261 1908 + 0.427673
NA PSHAa0884 conserved protein of unknown functionchromosome I CDS913158 951 + 0.444795
NA PSHAa2368 putative phosphatidylglycerophosphatasechromosome I CDS2516155 486 - 0.415638
NA PSHAa2845 Acyltransferase family protein (Phospholipid/glycerol acyltransferase)chromosome I CDS3016425 873 - 0.358534
NA PSHAa1750 putative tartronate semialdehyde reductase (TSAR)chromosome I CDS1835908 879 - 0.39818
NA PSHAa2415 putative membrane proteinchromosome I CDS2563722 1002 - 0.365269
NA PSHAb0408 putative 3-hydroxylacyl-(acyl carrier protein) dehydratasechromosome II CDS465089 411 + 0.391728
NA PSHAb0394 putative acyl carrier proteinchromosome II CDS452947 246 + 0.361789
NA PSHAa1447 succinyl-CoA transferase, subunit Achromosome I CDS1524416 699 - 0.420601
NA PSHAa2132 putative AMP-binding proteinchromosome I CDS2253689 1611 - 0.427685
NA PSHAa0898 putative acyl dehydratasechromosome I CDS929140 936 + 0.443376
NA PSHAb0455 conserved protein of unknown functionchromosome II CDS514339 711 + 0.414909
NA PSHAa2897 putative long chain acyl-CoA desaturasechromosome I CDS3066120 1134 + 0.420635
NA PSHAb0333 putative protein phosphatase with Diacylglycerol kinase domainchromosome II CDS386264 1629 + 0.387968
NA PSHAa0902 putative acyl CoA:acetate/3-ketoacid CoA transferase, beta subunitchromosome I CDS932048 807 + 0.453532
accA PSHAa2014 acetylCoA carboxylase, carboxytransferase subunit alphachromosome I CDS2125371 960 - 0.430208
accB PSHAa0265 Biotin carboxyl carrier protein of acetyl-CoA carboxylase (BCCP)chromosome I CDS278350 465 + 0.427957
accC PSHAa0266 biotin carboxylase (A subunit of acetyl-CoA carboxylase)(ACC)chromosome I CDS278841 1341 + 0.425056
accD PSHAa2074 acetylCoA carboxylase, carboxyltranferase subunit betachromosome I CDS2194018 876 - 0.421233
acpP PSHAa1807 acyl carrier proteinchromosome I CDS1896958 237 - 0.371308
acs PSHAa0698 acetyl-coenzyme A synthetase (Acetate--CoA ligase) (Acyl-activating enzyme)chromosome I CDS725393 1941 + 0.425554
atoA PSHAa1446 succinyl-CoA transferase, beta subunitchromosome I CDS1523742 657 - 0.438356
atoB PSHAa1586 acetyl-CoA acetyltransferase with thiolase domain, Acetoacetyl-CoA thiolasechromosome I CDS1652439 1194 + 0.449749
atoB PSHAa1454 acetyl-CoA acetyltransferase with thiolase domainchromosome I CDS1532492 1182 + 0.472081
atoE PSHAa0136 putative short-chain fatty acid transport protein (scFAT family)chromosome I CDS147810 1311 - 0.425629
bdhA PSHAa2944 putative 3-hydroxybutyrate dehydrogenasechromosome I CDS3118983 762 - 0.435696
bhbD PSHAa0399 3-hydroxybutyryl-CoA dehydrogenase (Beta-hydroxybutyryl-CoA dehydrogenase) (BHBD)chromosome I CDS417320 846 + 0.35461
cdsA PSHAa2031 phosphatidate cytidylyltransferase (CDP-diglyceride synthetase) (CDP-diglyceride pyrophosphorylase) (CDP-diacylglycerol synthase) (CDS) (CTP:phosphatichromosome I CDS2146802 867 - 0.425606
dxr PSHAa2030 1-deoxy-D-xylulose 5-phosphate reductoisomerasechromosome I CDS2145600 1206 - 0.427032
dxs PSHAa2366 1-deoxy-D-xylulose 5-phosphate synthase (DXP synthase)chromosome I CDS2511101 1863 + 0.433172
fabA PSHAa1491 beta-hydroxydecanoyl thioester dehydrase (trans-2-decenoyl-ACP isomerase)chromosome I CDS1569315 516 - 0.422481
fabB PSHAa2080 3-oxoacyl-[acyl-carrier-protein] synthase Ichromosome I CDS2202719 1212 - 0.432343
fabD PSHAa1809 malonyl-CoA-[acyl-carrier-protein] transacylasechromosome I CDS1898203 927 - 0.442287
fabF PSHAa1806 3-oxoacyl-[acyl-carrier-protein] synthase IIchromosome I CDS1895511 1239 - 0.428571
fabG PSHAa1808 3-oxoacyl-[acyl-carrier-protein] reductasechromosome I CDS1897445 747 - 0.452477
fabG PSHAa0883 putative 3-oxoacyl-[acyl-carrier-protein] reductasechromosome I CDS912284 783 + 0.443167
fabH PSHAb0304 3-oxoacyl-[acyl-carrier-protein] synthase III protein 2 (EC 2.3.1.41) (Beta-ketoacyl-ACP synthase III 2) (KAS III 2)chromosome II CDS355034 1080 - 0.449074
fabZ PSHAa2025 (3R)-hydroxymyristol acyl carrier protein dehydratasechromosome I CDS2139632 453 - 0.364238
fadA PSHAa0010 3-ketoacyl-CoA thiolase; (thiolase I, acetyl-CoA transferase), in complex with FadB catalyzes EC 2.3.1.16chromosome I CDS11474 1170 - 0.458974
fadB PSHAa0011 multifunctional 3-hydroxybutyryl-CoA epimerase, delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase, enoyl-CoA hydratase (N-terminal); 3-hydroxyacyl-CoA dchromosome I CDS12648 2160 - 0.414815
fadD PSHAb0502 acyl-CoA synthetase (long-chain-fatty-acid-CoA ligase), acyl-adenylate activating enzymechromosome II CDS567069 1749 + 0.376787
fadE PSHAa1920 acyl coenzyme A dehydrogenasechromosome I CDS2029625 2277 - 0.42029
fadE PSHAa1952 Acyl-coenzyme A dehydrogenase (ACDH)chromosome I CDS2059572 2460 + 0.43252
fadE PSHAb0374 Acyl-coenzyme A dehydrogenase (ACDH)chromosome II CDS438639 2256 + 0.421986
fadI PSHAa0966 beta-keto thiolasechromosome I CDS998246 1311 + 0.444699
fadJ PSHAa0967 bifunctional anaerobic fatty acid oxidation complex protein [Includes:enoyl-CoA hydratase/epimerase/isomerase (N-terminal); 3-hydroxyacyl-CoA dehydrogchromosome I CDS999556 2190 + 0.423288
fadL PSHAa2426 Long-chain fatty acid transport protein precursor (Outer membrane fadL protein)chromosome I CDS2578308 1245 - 0.398394
folM PSHAa0074 putative alternative dihydrofolate reductase, NAD(P)-binding domainchromosome I CDS76007 720 - 0.388889
hdhA PSHAa2129 7-alpha-hydroxysteroid dehydrogenase ( 7-alpha-HSDH)chromosome I CDS2250291 795 + 0.472956
hsdA PSHAa2145 3 alpha-hydroxysteroid dehydrogenase/carbonyl reductasechromosome I CDS2272108 768 + 0.492188
ispD PSHAa0684 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (4-diphosphocytidyl-2C-methyl-D-erythritol synthase)chromosome I CDS711008 726 + 0.410468
ispE PSHAa1055 4-diphosphocytidyl-2C-methyl-D-erythritol kinase (CMK) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase)chromosome I CDS1092302 855 - 0.409357
ispF PSHAa0685 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (MECPS) (MECDP-synthase)chromosome I CDS711730 498 + 0.429719
ispG PSHAb0138 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthasechromosome II CDS171469 1119 - 0.440572
ispH PSHAa0921 4-hydroxy-3-methylbut-2-enyl diphosphate reductasechromosome I CDS950039 930 + 0.452688
ispU PSHAa2032 undecaprenyl pyrophosphate synthetase (UPP synthetase) (Di-trans-poly-cis-decaprenylcistransferase) (Undecaprenyl diphosphate synthase) (UDS)chromosome I CDS2147689 780 - 0.412821
paaF PSHAa0882 putative enoyl-CoA hydratase-isomerasechromosome I CDS911337 786 - 0.463104
pgsA PSHAa1914 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (Phosphatidylglycerophosphate synthase) (PGP synthase)chromosome I CDS2022967 546 - 0.39011
plsB PSHAa0142 glycerol-3-phosphate acyltransferasechromosome I CDS153368 2439 - 0.395654
plsC PSHAa2584 1-acyl-sn-glycerol-3-phosphate acyltransferasechromosome I CDS2727682 714 - 0.379552
plsX PSHAa1810 fatty acid/phospholipid synthesis proteinchromosome I CDS1899187 1038 - 0.422929
prpE PSHAa2444 Propionyl CoA synthasechromosome I CDS2590650 1884 + 0.437367
psd PSHAa0486 phosphatidylserine decarboxylasechromosome I CDS503857 828 - 0.427536
tesB PSHAa0141 acyl-CoA thioesterase IIchromosome I CDS152407 858 + 0.432401