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2024-05-02 18:36:35

Gene list

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COG category: Lipid transport and metabolism
Organism: Rhodoferax ferrireducens DSM 15236, DSM 15236

Number of genes found: 198

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Rhodoferax ferrireducens DSM 15236, DSM 15236
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA Rfer_0523 acyl-CoA dehydrogenase-likechromosome CDS545691 1689 - 0.639432
NA Rfer_0134 conserved hypothetical proteinchromosome CDS138298 483 - 0.625259
NA Rfer_3248 hydroxymethylbutenyl pyrophosphate reductasechromosome CDS3599943 963 - 0.617861
NA Rfer_0995 Enoyl-CoA hydratase/isomerasechromosome CDS1047461 792 + 0.665404
NA Rfer_2021 phospholipid/glycerol acyltransferasechromosome CDS2180540 762 + 0.607612
NA Rfer_3506 acyl-CoA dehydrogenase-likechromosome CDS3897620 1167 - 0.623822
NA Rfer_3516 Acetyl-CoA C-acyltransferasechromosome CDS3910308 1197 - 0.630744
NA Rfer_4070 acyl-CoA dehydrogenase-likechromosome CDS4538992 1197 - 0.628237
NA Rfer_0685 acyltransferase 3chromosome CDS720615 1977 - 0.510875
NA Rfer_1925 AMP-dependent synthetase and ligasechromosome CDS2067139 1503 + 0.605456
NA Rfer_0078 phospholipase D/Transphosphatidylasechromosome CDS77643 1389 - 0.62419
NA Rfer_2139 Enoyl-CoA hydratase/isomerasechromosome CDS2320846 1143 + 0.5993
NA Rfer_1035 3-oxoacid CoA-transferase, subunit Bchromosome CDS1095160 642 - 0.610592
NA Rfer_0272 Acetyl-CoA C-acetyltransferasechromosome CDS276153 1251 - 0.641886
NA Rfer_2272 3-hydroxybutyryl-CoA dehydrogenasechromosome CDS2492961 849 - 0.572438
NA Rfer_1924 Enoyl-CoA hydratase/isomerasechromosome CDS2066241 819 + 0.611722
NA Rfer_0699 AMP-dependent synthetase and ligasechromosome CDS735024 1638 + 0.603175
NA Rfer_2845 AMP-dependent synthetase and ligasechromosome CDS3142616 1623 - 0.640789
NA Rfer_2706 membrane protein involved in aromatic hydrocarbon degradationchromosome CDS2979637 1203 + 0.546135
NA Rfer_2496 CDP-diacylglycerol--serineO-phosphatidyltransferasechromosome CDS2757133 687 - 0.516739
NA Rfer_4101 formyl transferase-likechromosome CDS4575053 1698 + 0.635453
NA Rfer_3519 acyl-CoA dehydrogenase-likechromosome CDS3914467 1797 - 0.598776
NA Rfer_0698 conserved hypothetical proteinchromosome CDS734666 252 - 0.547619
NA Rfer_4207 acyl-CoA dehydrogenase-likechromosome CDS4679014 1242 - 0.590982
NA Rfer_0216 Benzoate-CoA ligase familychromosome CDS213331 1599 - 0.631019
NA Rfer_2802 Carbamoyl-phosphate synthase L chain, ATP-bindingchromosome CDS3097249 2055 - 0.582482
NA Rfer_0225 MaoC-like dehydratasechromosome CDS224934 456 + 0.616228
NA Rfer_4038 phosphoesterase, PA-phosphatase relatedchromosome CDS4503630 1989 - 0.684263
NA Rfer_1733 acyl carrier proteinchromosome CDS1869756 240 + 0.466667
NA Rfer_3831 Enoyl-CoA hydratase/isomerasechromosome CDS4275769 777 - 0.625483
NA Rfer_2384 acyl-CoA dehydrogenase-likechromosome CDS2624361 1857 - 0.618201
NA Rfer_1959 acyl-CoA dehydrogenase-likechromosome CDS2102524 1791 + 0.604132
NA Rfer_3999 beta-ketoacyl synthasechromosome CDS4461431 1260 - 0.620635
NA Rfer_0224 3-hydroxybutyryl-CoA dehydrogenasechromosome CDS223456 1482 + 0.640351
NA Rfer_0220 Enoyl-CoA hydratase/isomerasechromosome CDS218122 1728 + 0.616319
NA Rfer_2283 AMP-dependent synthetase and ligasechromosome CDS2505745 1650 - 0.583636
NA Rfer_0868 Carbamoyl-phosphate synthase L chain, ATP-bindingchromosome CDS904970 1734 - 0.656863
NA Rfer_3876 6-phosphogluconate dehydrogenase, NAD-bindingchromosome CDS4327333 915 - 0.614208
NA Rfer_1009 Enoyl-CoA hydratase/isomerasechromosome CDS1063632 807 + 0.61834
NA Rfer_3899 Propionyl-CoA carboxylasechromosome CDS4353383 1833 + 0.660666
NA Rfer_3838 acyl-CoA dehydrogenase-likechromosome CDS4284389 1131 - 0.642794
NA Rfer_0545 AMP-dependent synthetase and ligasechromosome CDS569083 1686 - 0.620996
NA Rfer_3498 Enoyl-CoA hydratase/isomerasechromosome CDS3889364 816 - 0.648284
NA Rfer_3842 acyl-CoA dehydrogenase-likechromosome CDS4289465 1179 - 0.62341
NA Rfer_2819 Sterol-bindingchromosome CDS3121346 297 + 0.602694
NA Rfer_0607 Phosphatidylserine decarboxylasechromosome CDS632339 900 + 0.648889
NA Rfer_0402 alpha/beta hydrolasechromosome CDS407783 840 - 0.660714
NA Rfer_1332 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferasechromosome CDS1433609 1257 + 0.626094
NA Rfer_4204 AMP-dependent synthetase and ligasechromosome CDS4674891 1602 - 0.56367
NA Rfer_3612 methylmalonyl-CoA mutasechromosome CDS4025110 3342 - 0.613405
NA Rfer_2562 Poly(R)-hydroxyalkanoic acid synthase, class Ichromosome CDS2823570 1725 - 0.597101
NA Rfer_1731 malonyl CoA-acyl carrier protein transacylasechromosome CDS1867956 960 + 0.590625
NA Rfer_4067 AMP-dependent synthetase and ligasechromosome CDS4534527 1812 + 0.645695
NA Rfer_0430 2-hydroxy-3-oxopropionate reductasechromosome CDS436720 912 - 0.627193
NA Rfer_3038 2-hydroxy-3-oxopropionate reductasechromosome CDS3354004 888 + 0.603604
NA Rfer_2698 AMP-dependent synthetase and ligasechromosome CDS2967759 1812 - 0.639625
NA Rfer_3693 phospholipid/glycerol acyltransferasechromosome CDS4125375 735 - 0.632653
NA Rfer_2406 Holo-citrate lyase synthasechromosome CDS2648575 552 - 0.65942
NA Rfer_3182 fatty acid desaturasechromosome CDS3518993 1215 - 0.598354
NA Rfer_2416 Alpha/beta hydrolase fold-3chromosome CDS2659510 1065 + 0.643192
NA Rfer_3752 AMP-dependent synthetase and ligasechromosome CDS4183652 1674 - 0.576464
NA Rfer_0336 6-phosphogluconate dehydrogenase, NAD-bindingchromosome CDS335656 927 - 0.653722
NA Rfer_0223 Enoyl-CoA hydratase/isomerasechromosome CDS222635 798 + 0.645363
NA Rfer_1994 1-deoxy-D-xylulose-5-phosphate reductoisomerasechromosome CDS2149109 1215 + 0.595062
NA Rfer_4169 Butyryl-CoA dehydrogenasechromosome CDS4639912 1152 - 0.602431
NA Rfer_2145 AMP-dependent synthetase and ligasechromosome CDS2326892 2877 - 0.704901
NA Rfer_4181 Butyryl-CoA dehydrogenasechromosome CDS4651142 1152 + 0.604167
NA Rfer_1845 acetyl-CoA carboxylase beta subunitchromosome CDS1983502 888 + 0.614865
NA Rfer_1036 3-oxoacid CoA-transferase, subunit Achromosome CDS1095803 702 - 0.588319
NA Rfer_0446 3-hydroxyisobutyrate dehydrogenasechromosome CDS452019 891 - 0.65881
NA Rfer_3503 AMP-dependent synthetase and ligasechromosome CDS3893906 1857 + 0.613893
NA Rfer_4170 MaoC-like dehydratasechromosome CDS4641138 519 - 0.597302
NA Rfer_3978 acyl carrier proteinchromosome CDS4443947 273 - 0.553114
NA Rfer_1729 fatty acid/phospholipid synthesis protein PlsXchromosome CDS1865863 1050 + 0.559048
NA Rfer_0062 acyl-CoA dehydrogenase-likechromosome CDS64247 1704 - 0.56338
NA Rfer_2754 3-hydroxyacyl-CoA dehydrogenase, NAD-bindingchromosome CDS3040935 2160 + 0.606019
NA Rfer_1028 6-phosphogluconate dehydrogenase, NAD-bindingchromosome CDS1088167 879 - 0.522184
NA Rfer_3542 AMP-dependent synthetase and ligasechromosome CDS3938028 1947 - 0.586543
NA Rfer_2816 Enoyl-CoA hydratase/isomerasechromosome CDS3117534 837 - 0.647551
NA Rfer_4068 Enoyl-CoA hydratase/isomerasechromosome CDS4536349 804 + 0.708955
NA Rfer_4000 hypothetical proteinchromosome CDS4462776 438 + 0.472603
NA Rfer_1890 Enoyl-CoA hydratase/isomerasechromosome CDS2026993 813 - 0.618696
NA Rfer_0324 Enoyl-CoA hydratase/isomerasechromosome CDS322694 975 - 0.630769
NA Rfer_3830 Carbamoyl-phosphate synthase L chain, ATP-bindingchromosome CDS4273722 2025 - 0.645926
NA Rfer_3494 thioesterase superfamilychromosome CDS3886940 441 + 0.60771
NA Rfer_1646 acyl-CoA dehydrogenase-likechromosome CDS1775837 1182 - 0.620135
NA Rfer_2291 cyclase/dehydrasechromosome CDS2514780 444 - 0.560811
NA Rfer_1993 phosphatidate cytidylyltransferasechromosome CDS2148255 846 + 0.620567
NA Rfer_2805 methylmalonyl-CoA mutasechromosome CDS3102341 2160 - 0.599074
NA Rfer_3963 acetoacetyl-CoA synthasechromosome CDS4429902 2136 + 0.646536
NA Rfer_1006 AMP-dependent synthetase and ligasechromosome CDS1059922 1641 + 0.600244
NA Rfer_2675 undecaprenyl diphosphate synthasechromosome CDS2942396 729 + 0.596708
NA Rfer_3998 phospholipid/glycerol acyltransferasechromosome CDS4460660 747 - 0.615797
NA Rfer_3974 conserved hypothetical proteinchromosome CDS4440142 1134 - 0.573192
NA Rfer_3689 acyl-CoA dehydrogenase-likechromosome CDS4120480 1275 + 0.624314
NA Rfer_2561 Acetyl-CoA C-acetyltransferasechromosome CDS2822344 1179 - 0.622562
NA Rfer_2594 Acetyl-CoA C-acyltransferasechromosome CDS2856105 1182 - 0.652284
NA Rfer_1017 O-succinylbenzoate--CoA ligasechromosome CDS1072745 1659 + 0.613623
NA Rfer_3898 AMP-dependent synthetase and ligasechromosome CDS4351729 1662 + 0.649218
NA Rfer_3980 hypothetical proteinchromosome CDS4445194 288 + 0.541667
NA Rfer_2818 Propionyl-CoA carboxylasechromosome CDS3119569 1611 - 0.620732
NA Rfer_2331 lipolytic enzyme, G-D-S-Lchromosome CDS2560243 993 - 0.593152
NA Rfer_2127 short-chain dehydrogenase/reductase SDRchromosome CDS2304924 786 - 0.596692
NA Rfer_1300 phospholipase D/Transphosphatidylasechromosome CDS1394233 1236 + 0.615696
NA Rfer_1645 acyl-CoA dehydrogenase-likechromosome CDS1774686 1116 - 0.62276
NA Rfer_0767 coenzyme A transferasechromosome CDS803337 1953 + 0.633897
NA Rfer_0994 acyl-CoA dehydrogenase-likechromosome CDS1046280 1149 + 0.623151
NA Rfer_2592 acyl-CoA dehydrogenase-likechromosome CDS2853729 1146 - 0.651832
NA Rfer_0129 biotin/lipoyl attachmentchromosome CDS133964 234 - 0.525641
NA Rfer_2803 Propionyl-CoA carboxylasechromosome CDS3099663 1533 - 0.604697
NA Rfer_3832 Propionyl-CoA carboxylasechromosome CDS4276604 1623 - 0.641405
NA Rfer_2479 AMP-dependent synthetase and ligasechromosome CDS2730361 1680 - 0.645238
NA Rfer_1549 Squalene/phytoene synthasechromosome CDS1668960 840 - 0.625
NA Rfer_2972 Poly-beta-hydroxybutyrate polymerase-likechromosome CDS3277891 1839 + 0.628059
NA Rfer_2245 CDP-diacylglycerol--glycerol-3-phosphate3-phosph atidyltransferasechromosome CDS2459540 567 + 0.560847
NA Rfer_4205 Thiolasechromosome CDS4676519 1242 - 0.613527
NA Rfer_3328 acyl-CoA dehydrogenase-likechromosome CDS3693033 1251 + 0.61311
NA Rfer_1849 (Acyl-carrier protein) S-malonyltransferasechromosome CDS1986770 924 + 0.600649
NA Rfer_1734 beta-ketoacyl synthasechromosome CDS1870133 1248 + 0.588942
NA Rfer_0273 AMP-dependent synthetase and ligasechromosome CDS277417 1860 - 0.608065
NA Rfer_0193 hypothetical proteinchromosome CDS190357 1992 + 0.60994
NA Rfer_2386 3-hydroxyacyl-CoA dehydrogenase, NAD-bindingchromosome CDS2627546 2100 - 0.577619
NA Rfer_4180 MaoC-like dehydratasechromosome CDS4650549 519 + 0.597302
NA Rfer_1786 acetyl-CoA carboxylase, carboxyl transferase, beta subunitchromosome CDS1922112 873 - 0.604811
NA Rfer_3325 CDP-diacylglycerol--serineO-phosphatidyltransferasechromosome CDS3690234 813 + 0.574416
NA Rfer_1550 Squalene/phytoene synthasechromosome CDS1669810 885 - 0.647458
NA Rfer_1000 Acetyl-CoA C-acetyltransferasechromosome CDS1053844 1179 + 0.644614
NA Rfer_0226 Beta-ketoadipyl CoA thiolasechromosome CDS225386 1203 + 0.639235
NA Rfer_0979 6-phosphogluconate dehydrogenase, NAD-bindingchromosome CDS1028610 948 - 0.574894
NA Rfer_2817 acyl-CoA dehydrogenase-likechromosome CDS3118370 1152 - 0.601562
NA Rfer_1034 Beta-ketoadipyl CoA thiolasechromosome CDS1093936 1203 - 0.619285
NA Rfer_0264 acyl-CoA dehydrogenase-likechromosome CDS267006 1710 - 0.626316
NA Rfer_1573 Enoyl-CoA hydratase/isomerasechromosome CDS1702071 780 - 0.59359
NA Rfer_0997 Palmitoyl-CoA hydrolasechromosome CDS1051173 888 + 0.654279
NA Rfer_1753 holo-(acyl-carrier-protein) synthasechromosome CDS1887610 393 + 0.613232
NA Rfer_2634 3-oxoacid CoA-transferase, subunit Bchromosome CDS2897970 639 - 0.57277
NA Rfer_0274 Enoyl-CoA hydratase/isomerasechromosome CDS279359 783 - 0.641124
NA Rfer_0388 AMP-dependent synthetase and ligasechromosome CDS395956 1809 - 0.651741
NA Rfer_1444 Alpha/beta hydrolase fold-3chromosome CDS1556546 978 + 0.620654
NA Rfer_1999 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZchromosome CDS2155663 453 + 0.543046
NA Rfer_2383 Alpha/beta hydrolase fold-3chromosome CDS2623299 984 - 0.623984
NA Rfer_3988 conserved hypothetical proteinchromosome CDS4451513 303 + 0.617162
NA Rfer_2635 3-oxoacid CoA-transferase, subunit Achromosome CDS2898611 720 - 0.570833
NA Rfer_3517 3-hydroxyacyl-CoA dehydrogenase, NAD-bindingchromosome CDS3911525 2400 - 0.605
NA Rfer_3139 beta-ketoacyl synthasechromosome CDS3478426 1299 - 0.633564
NA Rfer_3617 putative phospholipasechromosome CDS4032198 1251 + 0.635492
NA Rfer_0321 AMP-dependent synthetase and ligasechromosome CDS319673 1512 - 0.627645
NA Rfer_2591 Enoyl-CoA hydratase/isomerasechromosome CDS2852926 807 - 0.628253
NA Rfer_2875 deoxyxylulose-5-phosphate synthasechromosome CDS3176825 1899 - 0.620853
NA Rfer_2752 acyl-CoA dehydrogenase-likechromosome CDS3038312 1164 - 0.589347
NA Rfer_3826 ABC transporter relatedchromosome CDS4268927 1731 - 0.632582
NA Rfer_1007 Enoyl-CoA hydratase/isomerasechromosome CDS1061696 831 + 0.65343
NA Rfer_1011 putative transcriptional regulator, TetR familychromosome CDS1065637 2313 + 0.590575
NA Rfer_2322 Propionate--CoA ligasechromosome CDS2549246 1896 - 0.612342
NA Rfer_2268 acyl-CoA dehydrogenase-likechromosome CDS2486132 1782 - 0.606061
NA Rfer_3977 beta-ketoacyl synthasechromosome CDS4442889 1062 - 0.605461
NA Rfer_0077 phosphatidylglycerophosphatase Achromosome CDS77023 582 - 0.66323
NA Rfer_3979 phosphoesterase, PA-phosphatase relatedchromosome CDS4444366 669 - 0.560538
NA Rfer_2385 Acetyl-CoA C-acyltransferasechromosome CDS2626300 1215 - 0.615638
NA Rfer_4002 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZchromosome CDS4464483 504 + 0.613095
NA Rfer_1019 acyl-CoA dehydrogenase-likechromosome CDS1075497 1254 + 0.58453
NA Rfer_0809 (Acyl-carrier protein) phosphodiesterasechromosome CDS846233 612 + 0.617647
NA Rfer_2815 Carbamoyl-phosphate synthase L chain, ATP-bindingchromosome CDS3115573 1965 - 0.619847
NA Rfer_0836 6-phosphogluconate dehydrogenase, NAD-bindingchromosome CDS874703 855 - 0.630409
NA Rfer_3886 conserved hypothetical proteinchromosome CDS4337202 414 - 0.649758
NA Rfer_1871 Acetyl-CoA C-acetyltransferasechromosome CDS2010659 1188 - 0.606902
NA Rfer_1730 3-oxoacyl-(acyl-carrier-protein) synthase IIIchromosome CDS1866916 978 + 0.588957
NA Rfer_1010 Enoyl-CoA hydratase/isomerasechromosome CDS1064435 879 + 0.606371
NA Rfer_3987 conserved hypothetical proteinchromosome CDS4450165 1347 + 0.632517
NA Rfer_0735 ABC transporter-likechromosome CDS774297 1842 + 0.609663
NA Rfer_2744 phospholipid/glycerol acyltransferasechromosome CDS3029927 918 + 0.571895
NA Rfer_2282 Enoyl-CoA hydratase/isomerasechromosome CDS2504956 714 + 0.581232
NA Rfer_2273 Acetyl-CoA C-acetyltransferasechromosome CDS2493888 1182 - 0.584602
NA Rfer_3833 AMP-dependent synthetase and ligasechromosome CDS4278237 1806 - 0.620709
NA Rfer_1351 acetyl-CoA carboxylase, carboxyl transferase, alpha subunitchromosome CDS1454195 978 + 0.579755
NA Rfer_3283 Thiolasechromosome CDS3644671 1167 + 0.657241
NA Rfer_0608 Enoyl-CoA hydratase/isomerasechromosome CDS633266 792 + 0.666667
NA Rfer_2705 putative lipase / esterase proteinchromosome CDS2978308 1290 + 0.522481
NA Rfer_3512 Enoyl-CoA hydratase/isomerasechromosome CDS3904985 765 - 0.602614
NA Rfer_1659 4-diphosphocytidyl-2C-methyl-D-erythritol kinasechromosome CDS1790693 864 + 0.547454
NA Rfer_3775 AMP-dependent synthetase and ligasechromosome CDS4217231 1695 - 0.621239
NA Rfer_3984 beta-ketoacyl synthasechromosome CDS4447723 1194 + 0.606365
NA Rfer_2581 Acetate--CoA ligasechromosome CDS2841863 1998 - 0.607107
NA Rfer_3353 acetyl-CoA carboxylase, biotin carboxyl carrier proteinchromosome CDS3724104 444 - 0.54955
NA Rfer_1676 MaoC-like dehydratasechromosome CDS1807537 456 + 0.585526
NA Rfer_3352 acetyl-CoA carboxylase, biotin carboxylasechromosome CDS3722736 1350 - 0.560741
NA Rfer_3284 AMP-dependent synthetase and ligasechromosome CDS3645834 1533 + 0.643836
NA Rfer_2153 phospholipase D/Transphosphatidylasechromosome CDS2336981 1461 + 0.645448
NA Rfer_2770 3-oxoacyl-(acyl-carrier protein) synthasechromosome CDS3058397 1119 - 0.57462
NA Rfer_2595 3-hydroxyacyl-CoA dehydrogenase, NAD-bindingchromosome CDS2857307 2121 - 0.643093
NA Rfer_2753 Acetyl-CoA C-acyltransferasechromosome CDS3039603 1206 + 0.62272
NA Rfer_1745 phosphoesterase, PA-phosphatase relatedchromosome CDS1881352 603 + 0.580431
NA Rfer_3839 Acetyl-CoA C-acetyltransferasechromosome CDS4285603 1194 - 0.647404
NA Rfer_2593 acyl-CoA dehydrogenase-likechromosome CDS2854885 1209 - 0.598842
NA Rfer_4001 beta-ketoacyl synthasechromosome CDS4463224 1263 + 0.634204
NA Rfer_1843 alpha subunit of malonate decarboxylasechromosome CDS1981479 1677 + 0.598688
NA Rfer_2393 AMP-dependent synthetase and ligasechromosome CDS2636240 1629 - 0.58011
NA Rfer_0384 phosphopantetheine-bindingchromosome CDS392468 252 - 0.611111