Gene list
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COG category: Lipid transport and metabolism
Organism: Syntrophus aciditrophicus SB
Number of genes found: 66
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Syntrophus aciditrophicus SB | |||||||||
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Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | SYN_00481 | glutaconyl-CoA decarboxylase A subunit | SubName: Full=Glutaconyl-CoA decarboxylase A subunit; EC=4.1.1.70; | chromosome | CDS | 2098959 | 1773 | + | 0.531303 |
NA | SYN_02896 | 4-hydroxybenzoate--CoA ligase / benzoate--CoA ligase | SubName: Full=4-hydroxybenzoate--CoA ligase / benzoate--CoA ligase; EC=6.2.1.25; EC=6.2.1.27; | chromosome | CDS | 816312 | 1575 | + | 0.526349 |
NA | SYN_03046 | 4-diphosphocytidyl-2-C-methyl-D-erythritolkinase | RecName: Full=4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Short=CMK; EC=2.7.1.148; AltName: Full=4-(cytidine-5-diphospho)-2-C-methyl-D-erythritol kinase; | chromosome | CDS | 1958567 | 840 | + | 0.507143 |
NA | SYN_00679 | lipase | SubName: Full=Lipase; EC=3.1.1.3; | chromosome | CDS | 2167807 | 1425 | + | 0.592281 |
NA | SYN_01653 | putative enoyl-CoA hydratase | SubName: Full=Putative enoyl-CoA hydratase; | chromosome | CDS | 3033855 | 771 | + | 0.513619 |
NA | SYN_00371 | activator of D-2-hydroxyacyl-CoA dehydratase | SubName: Full=Activator of D-2-hydroxyacyl-CoA dehydratase; | chromosome | CDS | 2928891 | 741 | - | 0.59919 |
NA | SYN_02566 | 3-oxoacyl-[acyl-carrier-protein] synthase | SubName: Full=3-oxoacyl-[acyl-carrier-protein] synthase; EC=2.3.1.41; | chromosome | CDS | 208407 | 1239 | + | 0.620662 |
NA | SYN_01694 | 3-oxoacyl-[acyl-carrier-protein] synthase | SubName: Full=3-oxoacyl-[acyl-carrier-protein] synthase; EC=2.3.1.41; | chromosome | CDS | 3000011 | 1278 | + | 0.543036 |
NA | SYN_01681 | acetyl-CoA acetyltransferase | SubName: Full=Acetyl-CoA acetyltransferase; EC=2.3.1.9; | chromosome | CDS | 3010219 | 1167 | - | 0.525279 |
NA | SYN_03076 | enoyl-CoA dehydratase, putative | SubName: Full=Enoyl-CoA dehydratase, putative; | chromosome | CDS | 3087042 | 789 | + | 0.581749 |
NA | SYN_02454 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase; EC=1.17.1.2; | chromosome | CDS | 1862575 | 1734 | + | 0.525952 |
NA | SYN_02364 | acyl carrier protein | RecName: Full=Acyl carrier protein; Short=ACP; | chromosome | CDS | 198947 | 243 | - | 0.452675 |
NA | SYN_01150 | 3-oxoacyl-[acyl-carrier-protein] synthase III | SubName: Full=3-oxoacyl-[acyl-carrier-protein] synthase III; EC=2.3.1.41; | chromosome | CDS | 375464 | 1011 | + | 0.553907 |
NA | SYN_02564 | acyl carrier protein | SubName: Full=Acyl carrier protein; | chromosome | CDS | 207405 | 369 | + | 0.552846 |
NA | SYN_00912 | CDP-diacylglycerol--serineO-phosphatidyltransferase | SubName: Full=CDP-diacylglycerol--serine O-phosphatidyltransferase; EC=2.7.8.8; | chromosome | CDS | 1644514 | 765 | + | 0.45098 |
NA | SYN_01699 | acyl-CoA dehydrogenase | SubName: Full=Acyl-CoA dehydrogenase; | chromosome | CDS | 2996001 | 1245 | + | 0.498795 |
NA | SYN_02365 | 3-oxoacyl-[acyl-carrier-protein] synthase | RecName: Full=3-oxoacyl-[acyl-carrier-protein] synthase 2; EC=2.3.1.179; | chromosome | CDS | 197608 | 1260 | - | 0.576984 |
NA | SYN_02166 | CDP-diacylglycerol--glycerol-3-phosphate3-phosph atidyltransferase | SubName: Full=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; EC=2.7.8.5; | chromosome | CDS | 1469099 | 585 | + | 0.475214 |
NA | SYN_01700 | malonyl-CoA-[acyl-carrier-protein] transacylase | RecName: Full=Malonyl CoA-acyl carrier protein transacylase; EC=2.3.1.39; | chromosome | CDS | 2995035 | 966 | + | 0.52381 |
NA | SYN_01398 | methylmalonyl-CoA decarboxylase, alpha-subunit | SubName: Full=Methylmalonyl-CoA decarboxylase, alpha-subunit; EC=4.1.1.41; | chromosome | CDS | 2044299 | 1572 | + | 0.53944 |
NA | SYN_01041 | pyruvate carboxylase biotin carboxylase subunit | SubName: Full=Pyruvate carboxylase biotin carboxylase subunit; EC=6.4.1.1; | chromosome | CDS | 1623723 | 1461 | + | 0.50924 |
NA | SYN_01692 | acyltransferase | SubName: Full=Acyltransferase; | chromosome | CDS | 3001584 | 825 | + | 0.499394 |
NA | SYN_02898 | 4-hydroxybenzoate--CoA ligase / benzoate--CoA ligase | SubName: Full=4-hydroxybenzoate--CoA ligase / benzoate--CoA ligase; EC=6.2.1.25; EC=6.2.1.27; | chromosome | CDS | 818321 | 1575 | - | 0.527619 |
NA | SYN_01149 | 3-oxoacyl-[acyl-carrier-protein] synthase III | SubName: Full=3-oxoacyl-[acyl-carrier-protein] synthase III; EC=2.3.1.41; | chromosome | CDS | 376499 | 1008 | + | 0.520833 |
NA | SYN_00918 | undecaprenyl pyrophosphate synthetase | RecName: Full=Isoprenyl transferase; EC=2.5.1.-; | chromosome | CDS | 1639018 | 786 | + | 0.46056 |
NA | SYN_00480 | acyl-CoA dehydrogenase, short-chain specific | SubName: Full=Acyl-CoA dehydrogenase, short-chain specific; EC=1.3.8.1; | chromosome | CDS | 2097734 | 1152 | + | 0.538194 |
NA | SYN_02643 | long-chain-fatty-acid--CoA ligase | SubName: Full=Long-chain-fatty-acid--CoA ligase; EC=6.2.1.3; | chromosome | CDS | 2659026 | 1503 | + | 0.577512 |
NA | SYN_02597 | propionate CoA-transferase | RecName: Full=Acetate CoA-transferase YdiF; EC=2.8.3.8; | chromosome | CDS | 454490 | 1596 | + | 0.54198 |
NA | SYN_02031 | phosphatidylglycerophosphatase A | RecName: Full=Phosphatidylglycerophosphatase A; EC=3.1.3.27; AltName: Full=Phosphatidylglycerolphosphate phosphatase A; | chromosome | CDS | 344597 | 384 | - | 0.557292 |
NA | SYN_01716 | CDP-diacylglycerol--glycerol-3-phosphate3-phosph atidyltransferase | SubName: Full=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; EC=2.7.8.5; | chromosome | CDS | 651922 | 540 | + | 0.472222 |
NA | SYN_01698 | 3-oxoacyl-[acyl-carrier-protein] synthase III | SubName: Full=3-oxoacyl-[acyl-carrier-protein] synthase III; EC=2.3.1.41; | chromosome | CDS | 2997248 | 981 | + | 0.519878 |
NA | SYN_01223 | acetyl-CoA synthetase | RecName: Full=Acetyl-coenzyme A synthetase; Short=AcCoA synthetase; Short=Acs; EC=6.2.1.1; AltName: Full=Acetate--CoA ligase; AltName: Full=Acyl-activating enzyme; | chromosome | CDS | 2481870 | 1944 | - | 0.596708 |
NA | SYN_01697 | 3-hydroxydecanoyl-[acyl-carrier-protein]dehydrat ase | SubName: Full=3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase; EC=4.2.1.59; | chromosome | CDS | 2998225 | 591 | + | 0.510998 |
NA | SYN_01309 | enoyl-CoA hydratase | SubName: Full=Enoyl-CoA hydratase; | chromosome | CDS | 1995851 | 801 | + | 0.546816 |
NA | SYN_02281 | polysaccharide acetyltransferase | SubName: Full=Polysaccharide acetyltransferase; EC=2.3.1.-; | chromosome | CDS | 561393 | 990 | - | 0.433333 |
NA | SYN_00794 | phosphatidylserine/phosphatidylglycerophosphate related protein | SubName: Full=Phosphatidylserine/phosphatidylglycerophosphate related protein; | chromosome | CDS | 2349832 | 732 | - | 0.565574 |
NA | SYN_01151 | acyl carrier protein | SubName: Full=Acyl carrier protein; | chromosome | CDS | 375143 | 255 | + | 0.486275 |
NA | SYN_03128 | long-chain-fatty-acid--CoA ligase | SubName: Full=Long-chain-fatty-acid--CoA ligase; EC=6.2.1.3; | chromosome | CDS | 702655 | 1680 | + | 0.514286 |
NA | SYN_02586 | acyl-CoA dehydrogenase, medium-chain specific | SubName: Full=Acyl-CoA dehydrogenase, medium-chain specific; | chromosome | CDS | 229522 | 1155 | + | 0.536797 |
NA | SYN_01145 | fatty acid-CoA ligase | SubName: Full=Fatty acid-CoA ligase; | chromosome | CDS | 380643 | 1599 | + | 0.529706 |
NA | SYN_01695 | 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase | SubName: Full=3-hydroxymyristoyl/3-hydroxydecanoyl-(Acyl carrier protein) dehydratase; | chromosome | CDS | 2999542 | 480 | + | 0.470833 |
NA | SYN_01088 | acyl-CoA hydrolase | SubName: Full=Acyl-CoA hydrolase; EC=3.1.2.20; | chromosome | CDS | 1915393 | 423 | - | 0.460993 |
NA | SYN_03246 | hypothetical cytosolic protein | SubName: Full=Hypothetical cytosolic protein; | chromosome | CDS | 206905 | 366 | + | 0.581967 |
NA | SYN_01146 | acyl-CoA dehydrogenase | SubName: Full=Acyl-CoA dehydrogenase; EC=1.3.99.-; | chromosome | CDS | 379482 | 1146 | + | 0.558464 |
NA | SYN_00916 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase | RecName: Full=1-deoxy-D-xylulose 5-phosphate reductoisomerase; Short=DXP reductoisomerase; EC=1.1.1.267; AltName: Full=1-deoxyxylulose-5-phosphate reductoisomerase; AltName: Full=2-C-methyl-D-erythritol 4-phosphate synthase; | chromosome | CDS | 1640677 | 1164 | + | 0.491409 |
NA | SYN_02640 | long-chain-fatty-acid--CoA ligase | SubName: Full=Long-chain-fatty-acid--CoA ligase; EC=6.2.1.3; | chromosome | CDS | 2663194 | 1692 | - | 0.560284 |
NA | SYN_01401 | 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | RecName: Full=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; EC=2.7.7.60; AltName: Full=4-diphosphocytidyl-2C-methyl-D-erythritol synthase; AltName: Full=MEP cytidylyltransferase; Short=MCT; | chromosome | CDS | 2048141 | 705 | - | 0.504965 |
NA | SYN_00917 | phosphatidate cytidylyltransferase | RecName: Full=Phosphatidate cytidylyltransferase; EC=2.7.7.41; | chromosome | CDS | 1639874 | 807 | + | 0.475836 |
NA | SYN_00913 | phosphatidylserine decarboxylase | RecName: Full=Phosphatidylserine decarboxylase proenzyme; EC=4.1.1.65; Contains: RecName: Full=Phosphatidylserine decarboxylase alpha chain; Contains: RecName: Full=Phosphatidylserine decarboxylase beta chain; | chromosome | CDS | 1643873 | 642 | + | 0.461059 |
NA | SYN_01576 | activator of 2-hydroxyglutaryl-CoA dehydratase | SubName: Full=Activator of 2-hydroxyglutaryl-CoA dehydratase; | chromosome | CDS | 797824 | 4356 | - | 0.577135 |
NA | SYN_02559 | rubrerythrin and thioesterase superfamily protein | SubName: Full=Rubrerythrin and thioesterase superfamily protein; | chromosome | CDS | 202441 | 876 | + | 0.545662 |
NA | SYN_02642 | acetyl-CoA acetyltransferase | SubName: Full=Acetyl-CoA acetyltransferase; EC=2.3.1.9; | chromosome | CDS | 2660566 | 1293 | + | 0.591647 |
NA | SYN_02587 | acyl-CoA dehydrogenase, short-chain specific | SubName: Full=Acyl-CoA dehydrogenase, short-chain specific; EC=1.3.8.1; | chromosome | CDS | 230609 | 1245 | + | 0.541365 |
NA | SYN_02639 | long-chain fatty acid transport protein | SubName: Full=Long-chain fatty acid transport protein; | chromosome | CDS | 2665027 | 1470 | - | 0.552381 |
NA | SYN_01693 | acyl carrier protein | RecName: Full=Acyl carrier protein; | chromosome | CDS | 3001327 | 249 | + | 0.429719 |
NA | SYN_02779 | Holo-synthase | RecName: Full=Holo-[acyl-carrier-protein] synthase; Short=Holo-ACP synthase; EC=2.7.8.7; AltName: Full=4-phosphopantetheinyl transferase AcpS; | chromosome | CDS | 1574610 | 387 | + | 0.490956 |
NA | SYN_02456 | 1-deoxy-D-xylulose 5-phosphate synthase | RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; EC=2.2.1.7; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS; | chromosome | CDS | 1859757 | 1953 | + | 0.549923 |
NA | SYN_02620 | o-succinylbenzoic acid--CoA ligase | SubName: Full=O-succinylbenzoic acid--CoA ligase; EC=6.2.1.26; | chromosome | CDS | 2844422 | 1452 | - | 0.61708 |
NA | SYN_02635 | acetyl-CoA synthetase | SubName: Full=Acetyl-CoA synthetase; EC=6.2.1.1; | chromosome | CDS | 2670765 | 1971 | - | 0.578387 |
NA | SYN_02354 | phosphatidylglycerophosphatase B-like protein | SubName: Full=Phosphatidylglycerophosphatase B-like protein; | chromosome | CDS | 505247 | 729 | + | 0.513032 |
NA | SYN_02128 | acyl-CoA dehydrogenase, long-chain specific | SubName: Full=Acyl-CoA dehydrogenase, long-chain specific; EC=1.3.8.8; | chromosome | CDS | 1094558 | 1170 | + | 0.57265 |
NA | SYN_01400 | 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | RecName: Full=2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Short=MECDP-synthase; Short=MECPP-synthase; Short=MECPS; EC=4.6.1.12; | chromosome | CDS | 2047542 | 480 | - | 0.495833 |
NA | SYN_01275 | 1-acyl-sn-glycerol-3-phosphate acyltransferase | SubName: Full=1-acyl-sn-glycerol-3-phosphate acyltransferase; EC=2.3.1.51; | chromosome | CDS | 286948 | 765 | - | 0.55817 |
NA | SYN_01310 | 3-hydroxyacyl-CoA dehydrogenase | SubName: Full=3-hydroxyacyl-CoA dehydrogenase; | chromosome | CDS | 1994999 | 852 | + | 0.49061 |
NA | SYN_02342 | cardiolipin synthetase | SubName: Full=Cardiolipin synthetase; EC=2.7.8.-; | chromosome | CDS | 514701 | 1479 | + | 0.541582 |
NA | SYN_02417 | 2-aminobenzoate-CoA ligase | SubName: Full=2-aminobenzoate-CoA ligase; EC=6.2.1.32; | chromosome | CDS | 2885090 | 1596 | - | 0.531955 |