Gene list
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COG category: Lipid transport and metabolism
Organism: Porphyromonas gingivalis W83, W83
Number of genes found: 46
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Porphyromonas gingivalis W83, W83 | |||||||||
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Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | PG1521 | O-succinylbenzoic acid--CoA ligase | SubName: Full=O-succinylbenzoic acid--CoA ligase; | chromosome | CDS | 1598144 | 1050 | - | 0.522857 |
NA | PG1075 | coenzyme A transferase, beta subunit | SubName: Full=Coenzyme A transferase, beta subunit; | chromosome | CDS | 1142918 | 663 | + | 0.467572 |
NA | PG1080 | 3-hydroxyacyl-CoA dehydrogenase family protein | SubName: Full=3-hydroxyacyl-CoA dehydrogenase family protein; | chromosome | CDS | 1147506 | 846 | + | 0.492908 |
NA | PG2069 | oxidoreductase, short chain dehydrogenase/reductase family | SubName: Full=Oxidoreductase, short chain dehydrogenase/reductase family; | chromosome | CDS | 2164938 | 732 | + | 0.535519 |
NA | PG1145 | long-chain-fatty-acid--CoA ligase, putative | SubName: Full=Long-chain-fatty-acid--CoA ligase, putative; | chromosome | CDS | 1228572 | 1824 | - | 0.50932 |
NA | PG2070 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2165681 | 927 | + | 0.498382 |
NA | PG1587 | PAP2 superfamily protein | SubName: Full=PAP2 superfamily protein; | chromosome | CDS | 1665123 | 717 | + | 0.461646 |
NA | PG1738 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1824187 | 1035 | - | 0.501449 |
NA | PG1773 | PAP2 superfamily protein | SubName: Full=PAP2 superfamily protein; | chromosome | CDS | 1859955 | 1338 | + | 0.503737 |
NA | PG1829 | long-chain-fatty-acid--CoA ligase, putative | SubName: Full=Long-chain-fatty-acid--CoA ligase, putative; | chromosome | CDS | 1921397 | 1674 | - | 0.498805 |
NA | PG0071 | UDP-3-O-acyl-GlcNAc deacetylase/beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ | RecName: Full=Bifunctional enzyme LpxC/FabZ; Includes: RecName: Full=UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; EC=3.5.1.-; AltName: Full=UDP-3-O-acyl-GlcNAc deacetylase; Includes: RecName: Full=3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ; EC=4.2.1.59; AltName: Full=(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; Short=(3R)-hydroxymyristoyl-ACP dehydrase; AltName: Full=Beta-hydroxyacyl-ACP dehydratase; | chromosome | CDS | 84821 | 1389 | - | 0.49604 |
NA | PG1291 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1369541 | 1728 | - | 0.456019 |
NA | PG1079 | enoyl-CoA hydratase/isomerase family protein | SubName: Full=Enoyl-CoA hydratase/isomerase family protein; | chromosome | CDS | 1146689 | 771 | + | 0.511025 |
NA | PG1782 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1870834 | 1188 | + | 0.48064 |
NA | PG0775 | acyl-CoA dehydrogenase family protein | SubName: Full=Acyl-CoA dehydrogenase family protein; | chromosome | CDS | 827522 | 1722 | - | 0.513937 |
NA | PG1067 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1134359 | 390 | + | 0.476923 |
NA | PG0965 | phosphatidylserine decarboxylase-related protein | RecName: Full=Phosphatidylserine decarboxylase proenzyme; EC=4.1.1.65; Contains: RecName: Full=Phosphatidylserine decarboxylase alpha chain; Contains: RecName: Full=Phosphatidylserine decarboxylase beta chain; | chromosome | CDS | 1025201 | 666 | - | 0.46997 |
NA | PG0448 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 488229 | 1305 | + | 0.4659 |
NA | PG1600 | membrane protein, putative | SubName: Full=Membrane protein, putative; | chromosome | CDS | 1680049 | 1026 | - | 0.461988 |
NA | PG1503 | LytB-related protein | SubName: Full=LytB-related protein; | chromosome | CDS | 1580365 | 951 | + | 0.363828 |
NA | PG1355 | acyltransferase, putative | SubName: Full=Acyltransferase, putative; | chromosome | CDS | 1434852 | 531 | - | 0.502825 |
NA | PG0872 | mobilizable transposon, xis protein | SubName: Full=Mobilizable transposon, xis protein; | chromosome | CDS | 934936 | 360 | - | 0.441667 |
NA | PG1249 | 1-acyl-sn-glycerol-3-phosphate acetyltransferase, putative | SubName: Full=1-acyl-sn-glycerol-3-phosphate acetyltransferase, putative; | chromosome | CDS | 1326637 | 615 | - | 0.515447 |
NA | PG1348 | conserved hypothetical protein TIGR00147 | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1428748 | 882 | + | 0.502268 |
acdA | PG1076 | acyl-CoA dehydrogenase, short-chain specific | SubName: Full=Acyl-CoA dehydrogenase, short-chain specific; | chromosome | CDS | 1143625 | 1140 | + | 0.477193 |
acpP | PG1765 | acyl carrier protein | RecName: Full=Acyl carrier protein; Short=ACP; | chromosome | CDS | 1853152 | 237 | - | 0.413502 |
cdsA | PG0046 | phosphatidate cytidylyltransferase | RecName: Full=Phosphatidate cytidylyltransferase; EC=2.7.7.41; | chromosome | CDS | 56436 | 855 | - | 0.511111 |
cls | PG1647 | cardiolipin synthetase | SubName: Full=Cardiolipin synthetase; | chromosome | CDS | 1726413 | 1422 | + | 0.523207 |
ctfA | PG1066 | butyrate-acetoacetate CoA-transferase, subunit A | SubName: Full=Butyrate-acetoacetate CoA-transferase, subunit A; | chromosome | CDS | 1133661 | 645 | + | 0.47907 |
dxr | PG1364 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase | RecName: Full=1-deoxy-D-xylulose 5-phosphate reductoisomerase; Short=DXP reductoisomerase; EC=1.1.1.267; AltName: Full=1-deoxyxylulose-5-phosphate reductoisomerase; AltName: Full=2-C-methyl-D-erythritol 4-phosphate synthase; | chromosome | CDS | 1444478 | 1158 | - | 0.497409 |
dxs | PG2217 | deoxyxylulose-5-phosphate synthase | RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; EC=2.2.1.7; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS; | chromosome | CDS | 2329763 | 1905 | + | 0.539633 |
fabD | PG0138 | malonyl CoA-acyl carrier protein transacylase | RecName: Full=Malonyl CoA-acyl carrier protein transacylase; EC=2.3.1.39; | chromosome | CDS | 160813 | 882 | + | 0.531746 |
fabF | PG1764 | 3-oxoacyl-(acyl-carrier-protein) synthase II | RecName: Full=3-oxoacyl-[acyl-carrier-protein] synthase 2; EC=2.3.1.179; | chromosome | CDS | 1851886 | 1257 | - | 0.501989 |
fabG | PG1239 | 3-oxoacyl-(acyl-carrier-protein) reductase | SubName: Full=3-oxoacyl-(Acyl-carrier-protein) reductase; | chromosome | CDS | 1313713 | 747 | - | 0.512718 |
fabH | PG2141 | 3-oxoacyl-(acyl-carrier-protein) synthase III | RecName: Full=3-oxoacyl-[acyl-carrier-protein] synthase 3; EC=2.3.1.180; AltName: Full=3-oxoacyl-[acyl-carrier-protein] synthase III; AltName: Full=Beta-ketoacyl-ACP synthase III; Short=KAS III; | chromosome | CDS | 2246639 | 1008 | + | 0.492063 |
ispD | PG1434 | 4-diphosphocytidyl-2C-methyl-D-erythritolsynthas e | RecName: Full=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; EC=2.7.7.60; AltName: Full=4-diphosphocytidyl-2C-methyl-D-erythritol synthase; AltName: Full=MEP cytidylyltransferase; Short=MCT; | chromosome | CDS | 1519162 | 669 | + | 0.488789 |
ispE | PG0935 | 4-diphosphocytidyl-2C-methyl-D-erythritol kinase | RecName: Full=4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Short=CMK; EC=2.7.1.148; AltName: Full=4-(cytidine-5-diphospho)-2-C-methyl-D-erythritol kinase; | chromosome | CDS | 994387 | 825 | - | 0.493333 |
ispF | PG0028 | 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | RecName: Full=2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Short=MECDP-synthase; Short=MECPP-synthase; Short=MECPS; EC=4.6.1.12; | chromosome | CDS | 34003 | 489 | + | 0.503067 |
ispG | PG0952 | 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase | RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; EC=1.17.7.1; AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; | chromosome | CDS | 1011062 | 1746 | + | 0.498855 |
ispH | PG0604 | hydroxymethylbutenyl pyrophosphate reductase | RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase; EC=1.17.1.2; | chromosome | CDS | 660402 | 870 | + | 0.521839 |
mmdA | PG1612 | methylmalonyl-CoA decarboxylase, alpha subunit | SubName: Full=Methylmalonyl-CoA decarboxylase, alpha subunit; | chromosome | CDS | 1691602 | 1554 | - | 0.50193 |
mmdC | PG1609 | methylmalonyl-CoA decarboxylase, gamma subunit | SubName: Full=Methylmalonyl-CoA decarboxylase, gamma subunit; | chromosome | CDS | 1689931 | 435 | - | 0.468966 |
mutA | PG1656 | methylmalonyl-CoA mutase, small subunit | RecName: Full=Methylmalonyl-CoA mutase small subunit; EC=5.4.99.2; AltName: Full=MCM-beta; | chromosome | CDS | 1737599 | 1857 | + | 0.523963 |
mutB | PG1657 | methylmalonyl-CoA mutase, large subunit | RecName: Full=Methylmalonyl-CoA mutase large subunit; EC=5.4.99.2; AltName: Full=MCM-alpha; | chromosome | CDS | 1739484 | 2148 | + | 0.543296 |
tagD | PG2068 | glycerol-3-phosphate cytidylyltransferase | SubName: Full=Glycerol-3-phosphate cytidylyltransferase; | chromosome | CDS | 2164474 | 459 | + | 0.481481 |
uppS | PG0190 | undecaprenyl diphosphate synthase | RecName: Full=Isoprenyl transferase; EC=2.5.1.-; | chromosome | CDS | 226216 | 765 | + | 0.503268 |