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2024-05-04 11:31:59

Gene list

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COG category: Lipid transport and metabolism
Organism: Pseudomonas putida KT2440, KT2440

Number of genes found: 193

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Pseudomonas putida KT2440, KT2440
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA PP4780 acyl-CoA dehydrogenase, putativechromosome CDS5440929 1653 - 0.656382
NA PP1412 enoyl-CoA hydratase/isomerase family proteinchromosome CDS1610967 1107 - 0.646793
NA PP5219 conserved hypothetical proteinchromosome CDS5953698 1296 - 0.63966
NA PP2783 3-oxoacyl-(acyl-carrier-protein) reductasechromosome CDS3170992 738 + 0.617886
NA PP4636 beta-ketothiolasechromosome CDS5259457 1179 + 0.650551
NA PP2711 oxidoreductase, short-chain dehydrogenase/reductase familychromosome CDS3101364 807 + 0.630731
NA PP3354 acyl-CoA dehydrogenase, ferrulic acid biotransformation protein, putativechromosome CDS3791560 1755 - 0.676923
NA PP3972 oxidoreductase, short chain dehydrogenase/reductase familychromosome CDS4480131 1326 + 0.579186
NA PP3355 beta-ketothiolasechromosome CDS3793329 1191 - 0.680101
NA PP1951 oxidoreductase, short chain dehydrogenase/reductase familychromosome CDS2207786 828 + 0.549517
NA PP1466 long-chain acyl-CoA thioester hydrolase family proteinchromosome CDS1670668 408 + 0.625
NA PP2755 conserved hypothetical proteinchromosome CDS3139444 1245 + 0.661044
NA PP5161 conserved hypothetical proteinchromosome CDS5886005 1002 - 0.649701
NA PP0581 3-oxoacyl-(acyl-carrier-protein) reductasechromosome CDS677642 1374 - 0.66885
NA PP3926 oxidoreductase, short-chain dehydrogenase/reductase familychromosome CDS4431333 768 + 0.614583
NA PP0738 conserved domain proteinchromosome CDS856684 699 - 0.589413
NA PP1689 long-chain fatty acid transporter, putativechromosome CDS1881294 1266 - 0.598736
NA PP3303 3-oxoacyl-(acyl-carrier-protein) synthase II, putativechromosome CDS3738245 1314 + 0.627093
NA PP0925 conserved hypothetical proteinchromosome CDS1066758 888 + 0.682432
NA PP2308 acyl-CoA thioesterase II, putativechromosome CDS2637892 798 + 0.64411
NA PP5356 long-chain acyl-CoA thioester hydrolase family proteinchromosome CDS6106788 486 + 0.590535
NA PP3787 hypothetical proteinchromosome CDS4315002 918 + 0.602396
NA PP2784 oxidoreductase, short-chain dehydrogenase/reductase familychromosome CDS3171726 765 + 0.610458
NA PP2795 AMP-binding domain proteinchromosome CDS3184361 1647 + 0.660595
NA PP1845 enoyl-CoA hydratase/isomerase family proteinchromosome CDS2068173 690 - 0.64058
NA PP2778 3-oxoacyl-(acyl-carrier-protein) synthase IIchromosome CDS3163208 1278 + 0.617371
NA PP2798 oxidoreductase, putativechromosome CDS3188302 909 - 0.624862
NA PP4948 acyl-CoA dehydrogenase family proteinchromosome CDS5635628 1803 + 0.643372
NA PP2507 oxidoreductase, short-chain dehydrogenase/reductase familychromosome CDS2854231 717 + 0.616457
NA PP2781 beta-ketoacyl synthasechromosome CDS3166735 1338 + 0.649477
NA PP2881 oxidoreductase, short chain dehydrogenase/reductase familychromosome CDS3280716 732 + 0.625683
NA PP2747 hypothetical proteinchromosome CDS3130181 972 + 0.656379
NA PP3123 CoA-transferase, subunit B, putativechromosome CDS3534054 657 + 0.61035
NA PP4551 hydrolase, alpha/beta fold familychromosome CDS5175196 945 + 0.647619
NA PP0730 conserved hypothetical proteinchromosome CDS847257 1311 - 0.574371
NA PP3725 acyl-CoA dehydrogenase, putativechromosome CDS4250041 1161 - 0.644272
NA PP1893 acyl-CoA dehydrogenase, putativechromosome CDS2134300 2448 - 0.652778
NA PP3924 conserved hypothetical proteinchromosome CDS4429728 318 + 0.581761
NA PP0639 hypothetical proteinchromosome CDS748964 717 - 0.404463
NA PP1817 oxidoreductase, short-chain dehydrogenase/reductase familychromosome CDS2042730 762 + 0.664042
NA PP3726 enoyl-CoA hydratase/isomerase family proteinchromosome CDS4251235 795 - 0.696855
NA PP5276 phospholipase D family proteinchromosome CDS6025120 1554 + 0.646075
NA PP4538 acyl carrier protein phosphodiesterase, putativechromosome CDS5154466 600 - 0.628333
NA PP1143 3-hydroxyisobutyrate dehydrogenase family proteinchromosome CDS1308479 888 + 0.652027
NA PP4632 oxidoreductase, short-chain dehydrogenase/reductase familychromosome CDS5255469 738 + 0.631436
NA PP2048 acyl-CoA dehydrogenase, putativechromosome CDS2329570 1851 + 0.65262
NA PP4063 long-chain-fatty-acid-CoA ligase, putativechromosome CDS4586129 1683 - 0.639929
NA PP4067 acetyl-CoA carboxylase, biotin carboxylase, putativechromosome CDS4591739 1953 + 0.651818
NA PP5331 long-chain acyl-CoA thioester hydrolase family proteinchromosome CDS6079578 399 + 0.626566
NA PP1763 oxidoreductase, short chain dehydrogenase/reductase familychromosome CDS1967246 741 - 0.65722
NA PP3547 oxidoreductase, short chain dehydrogenase/reductase familychromosome CDS4021361 747 - 0.659973
NA PP3458 long-chain-fatty-acid-CoA ligase, putativechromosome CDS3920074 1689 - 0.643576
NA PP2737 oxidoreductase, short-chain dehydrogenase/reductase familychromosome CDS3120688 753 - 0.678619
NA PP3553 AMP-binding domain proteinchromosome CDS4028620 1623 + 0.64695
NA PP2039 acyl-CoA dehydrogenase, putativechromosome CDS2317756 1167 + 0.627249
NA PP1852 oxidoreductase, short-chain dehydrogenase/reductase familychromosome CDS2076406 750 - 0.636
NA PP1274 oxidoreductase, short-chain dehydrogenase/reductase familychromosome CDS1456168 813 - 0.671587
NA PP0892 phospholipase family proteinchromosome CDS1033962 1158 + 0.653713
NA PP4066 enoyl-CoA hydratase, putativechromosome CDS4590927 816 + 0.661765
NA PP0731 phosphatidylserine synthase, putativechromosome CDS848580 618 - 0.556634
NA PP4379 3-oxoacyl-(acyl-carrier-protein) synthase IIIchromosome CDS4970635 930 - 0.608602
NA PP2772 monooxygenase, putativechromosome CDS3156268 1188 - 0.649832
NA PP2727 C-factor, putativechromosome CDS3112373 771 - 0.636835
NA PP2437 acyl-CoA dehydrogenase, putativechromosome CDS2783545 1245 + 0.634538
NA PP4813 PAP2 family protein/DedA family proteinchromosome CDS5475768 1317 + 0.666667
NA PP2377 acetyltransferase Act, putativechromosome CDS2717661 1152 + 0.615451
NA PP5198 conserved hypothetical proteinchromosome CDS5930382 483 - 0.621118
NA PP3812 lipase, putativechromosome CDS4337359 1020 + 0.627451
NA PP2002 oxidoreductase, short chain dehydrogenase/reductase familychromosome CDS2270403 774 + 0.651163
NA PP4065 3-methylcrotonyl-CoA carboxylase, beta subunit, putativechromosome CDS4589316 1608 + 0.66107
NA PP2777 acyl carrier protein, putativechromosome CDS3162630 570 + 0.603509
NA PP2038 long-chain-fatty-acid--CoA ligase, putativechromosome CDS2316044 1698 + 0.630153
NA PP3638 acyl-CoA dehydrogenase, putativechromosome CDS4133961 1065 - 0.647887
NA PP2709 long-chain-fatty-acid--CoA ligase, putativechromosome CDS3099219 1470 + 0.642177
NA PP2047 3-hydroxyacyl-CoA dehydrogenase family proteinchromosome CDS2328410 1239 + 0.650525
NA PP2780 3-oxoacyl-(acyl-carrier-protein) synthase IIchromosome CDS3165566 1299 + 0.647421
NA PP1745 oxidoreductase, short chain dehydrogenase/reductase familychromosome CDS1945117 810 + 0.649383
NA PP2540 oxidoreductase, short-chain dehydrogenase/reductase familychromosome CDS2884533 777 + 0.644788
NA PP1580 conserved hypothetical proteinchromosome CDS1772258 456 + 0.578947
NA PP3015 medium-chain acyl-CoA ligase domain proteinchromosome CDS3404307 204 + 0.602941
NA PP2125 conserved hypothetical protein TIGR00147chromosome CDS2424270 1047 + 0.638013
NA PP3754 beta-ketothiolasechromosome CDS4283396 1185 + 0.659916
NA PP3524 hypothetical proteinchromosome CDS3996364 333 - 0.594595
NA PP1700 acyltransferasechromosome CDS1894764 1986 + 0.62286
NA PP0763 medium-chain-fatty-acid CoA ligasechromosome CDS878470 1683 + 0.629234
NA PP3259 acyl-CoA dehydrogenase-related proteinchromosome CDS3692579 1044 - 0.645594
NA PP4975 long-chain acyl-CoA thioester hydrolase family proteinchromosome CDS5667288 402 - 0.579602
NA PP2793 acyl-CoA dehydrogenase family proteinchromosome CDS3182338 1173 + 0.657289
NA PP2762 conserved hypothetical proteinchromosome CDS3146627 1239 - 0.651332
NA PP0580 MaoC domain proteinchromosome CDS676788 852 - 0.642019
NA PP3124 transporter, short-chain fatty acid transporter familychromosome CDS3534865 1419 + 0.637068
NA PP4817 MaoC domain proteinchromosome CDS5479015 456 + 0.58114
NA PP2175 3-oxoacyl-(acyl-carrier-protein) reductase, putativechromosome CDS2480639 705 - 0.619858
NA PP0756 conserved hypothetical proteinchromosome CDS871888 1272 - 0.610063
NA PP3264 phospholipase family proteinchromosome CDS3698467 1203 - 0.613466
NA PP2503 3-oxoacyl-(acyl-carrier-protein) reductase, putativechromosome CDS2850206 732 + 0.648907
NA PP3732 enoyl-CoA hydratase/isomerase family proteinchromosome CDS4258451 747 + 0.646586
NA PP3071 acetoacetyl-CoA synthetase, putativechromosome CDS3453935 1953 - 0.646185
NA PP1953 oxidoreductase, short chain dehydrogenase/reductase familychromosome CDS2209753 810 + 0.579012
NA PP0923 acyltransferasechromosome CDS1065054 789 - 0.651458
NA PP4732 conserved hypothetical proteinchromosome CDS5381298 549 - 0.582878
NA PP0582 thiolase family proteinchromosome CDS679112 1278 + 0.64241
NA PP3122 CoA-transferase, subunit A, putativechromosome CDS3533320 699 + 0.609442
NA PP3226 acyl-CoA dehydrogenase-related proteinchromosome CDS3661688 1143 - 0.685039
NA PP4030 enoyl-CoA hydratase/isomerase family proteinchromosome CDS4540318 843 - 0.603796
NA PP2216 acyl-CoA dehydrogenase family proteinchromosome CDS2526956 1128 + 0.630319
NA PP3000 MaoC domain proteinchromosome CDS3395836 456 + 0.64693
NA PP3554 acyl-CoA dehydrogenase family proteinchromosome CDS4030335 1770 + 0.645198
NA PP2351 acetyl-CoA synthetase, putativechromosome CDS2681432 1890 + 0.643386
NA PP3284 enoyl-CoA hydratase/isomerasechromosome CDS3718624 774 - 0.656331
NA PP2866 acyl carrier protein phosphodiesterase, putativechromosome CDS3267527 612 + 0.630719
NA PP1618 YgbB/YacN family proteinchromosome CDS1814609 474 + 0.635021
NA PP2766 long-chain-fatty-acid--CoA ligase-related proteinchromosome CDS3149894 1131 + 0.707339
NA PP0592 oxidoreductase, short chain dehydrogenase/reductase familychromosome CDS690720 687 - 0.609898
NA PP1781 O-acyltransferase, putativechromosome CDS1993657 1089 - 0.596878
NA PP2723 oxidoreductase, short chain dehydrogenase/reductase familychromosome CDS3109320 858 - 0.601399
NA PP1946 oxidoreductase, short chain dehydrogenase/reductase familychromosome CDS2201352 789 + 0.569075
NA PP1708 oxidoreductase, short chain dehydrogenase/reductase familychromosome CDS1907760 759 - 0.657444
NA PP2794 oxidoreductase, short chain dehydrogenase/reductase familychromosome CDS3183510 768 + 0.701823
NA PP4218 lipase/esterase family proteinchromosome CDS4767855 957 - 0.663532
NA PP4545 3-oxoacyl-(acyl-carrier-protein) synthase III, putativechromosome CDS5162676 1173 - 0.629156
NA PP3491 enoly-coenzyme A hydratase/isomerase family proteinchromosome CDS3960710 1074 + 0.66108
PP0058 1-acyl-sn-glycerol-3-phosphate acyltransferase, putativechromosome CDS68487 786 - 0.603053
PP0217 fatty acid desaturase family proteinchromosome CDS268768 1185 - 0.635443
PP0223 monooxygenase, DszC familychromosome CDS275946 1221 - 0.663391
PP0224 monooxygenase, DszC familychromosome CDS277263 1242 - 0.658615
PP0251 conserved hypothetical proteinchromosome CDS305170 795 - 0.611321
PP0302 3-hydroxyacyl-CoA dehydrogenase family proteinchromosome CDS362515 966 - 0.635611
PP0332 acyltransferase, putativechromosome CDS398694 888 - 0.612613
PP0368 acyl-CoA dehydrogenase, putativechromosome CDS445314 1806 + 0.623477
PP0370 acyl-CoA dehydrogenase family proteinchromosome CDS448829 1779 + 0.629567
PP0418 lipase, GDSL familychromosome CDS507119 1890 - 0.640741
accA PP1607 acetyl-CoA carboxylase, carboxyl transferase, alpha subunitchromosome CDS1803644 948 + 0.611814
accB PP0559 acetyl-CoA carboxylase, biotin carboxyl carrier proteinchromosome CDS649693 462 - 0.603896
accC-1 PP0558 acetyl-CoA carboxylase, biotin carboxylasechromosome CDS648320 1356 - 0.612832
accC-2 PP5347 acetyl-CoA carboxylase, biotin carboxylasechromosome CDS6095272 1416 - 0.602401
accD PP1996 acetyl-CoA carboxylase, carboxyl transferase, beta subunitchromosome CDS2264048 894 + 0.630872
acdA PP3492 acyl-CoA dehydrogenasechromosome CDS3961800 1152 + 0.637153
acpP PP1915 acyl carrier proteinchromosome CDS2158592 237 + 0.527426
acsA PP4487 acetyl-coA synthetasechromosome CDS5097299 1962 - 0.620795
acsB PP4702 acetyl-CoA synthetasechromosome CDS5344601 1935 + 0.637209
atoB PP2051 acetyl-CoA acetyltransferasechromosome CDS2333066 1185 + 0.654852
bdhA PP3073 3-hydroxybutyrate dehydrogenasechromosome CDS3456515 771 - 0.635538
benD PP3164 cis-diol dehydrogenasechromosome CDS3584985 762 + 0.671916
cdsA PP1596 phosphatidate cytidylyltransferasechromosome CDS1789279 816 + 0.645833
cls PP5364 cardiolipin synthasechromosome CDS6112861 1446 + 0.596819
dxr PP1597 1-deoxy-D-xylulose 5-phosphate reductoisomerasechromosome CDS1790067 1215 + 0.649383
dxs PP0527 deoxyxylulose-5-phosphate synthasechromosome CDS612284 1968 - 0.648882
ech PP3358 enoyl-CoA hydratase/aldolasechromosome CDS3798066 831 - 0.619735
fabA PP4174 3-hydroxydecanoyl-(acyl-carrier-protein)dehydrat asechromosome CDS4716908 516 + 0.602713
fabB PP4175 3-oxoacyl-(acyl-carrier-protein) synthase Ichromosome CDS4717435 1221 + 0.625717
fabD PP1913 malonyl CoA-acyl carrier protein transacylasechromosome CDS2156694 939 + 0.651757
fabF PP1916 3-oxoacyl-(acyl-carrier-protein) synthase IIchromosome CDS2159016 1245 + 0.644177
fabG PP1914 3-oxoacyl-(acyl-carrier-protein) reductasechromosome CDS2157648 741 + 0.634278
fabZ PP1602 (3R)-hydroxymyristoyl-(acyl-carrier-protein)dehy dratasechromosome CDS1796808 492 + 0.573171
fadA PP2137 3-oxoacyl-CoA thiolasechromosome CDS2439257 1176 + 0.621599
fadAx PP2215 3-ketoacyl-CoA thiolasechromosome CDS2525754 1194 + 0.659967
fadB PP2136 fatty oxidation complex, alpha subunitchromosome CDS2437078 2148 + 0.619181
fadB1x PP2217 enoyl-CoA hydratase/isomerase FadB1xchromosome CDS2528097 774 + 0.618863
fadB2x PP2214 3-hydroxyacyl-CoA dehydrogenase FadB2xchromosome CDS2524975 768 + 0.644531
fadD PP4549 long-chain-fatty-acid-CoA ligasechromosome CDS5171260 1698 - 0.606007
fadD2 PP4550 long-chain-fatty-acid--CoA ligasechromosome CDS5173289 1689 - 0.626998
fadDx PP2213 acyl-CoA ligasechromosome CDS2523276 1686 + 0.626335
fcs PP3356 feruloyl-CoA-synthetasechromosome CDS3794567 1770 - 0.660452
gcdH glutaryl-CoA dehydrogenasechromosome CDS168402 1182 + 0.593063
glxR PP4299 2-hydroxy-3-oxopropionate reductasechromosome CDS4889706 894 + 0.627517
ispD PP1614 4-diphosphocytidyl-2C-methyl-D-erythritolsynthas echromosome CDS1810682 708 + 0.673729
ispE PP0723 4-diphosphocytidyl-2C-methyl-D-erythritol kinasechromosome CDS839839 861 - 0.58885
ispG PP0853 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthasechromosome CDS987012 1110 + 0.625225
ispH PP0606 hydroxymethylbutenyl pyrophosphate reductasechromosome CDS713985 948 + 0.631857
ivd PP4064 isovaleryl-CoA dehydrogenasechromosome CDS4588022 1275 + 0.626667
mmsB PP4666 3-hydroxyisobutyrate dehydrogenasechromosome CDS5291960 888 - 0.646396
paaC PP3282 3-hydroxyacyl-CoA dehydrogenase PaaCchromosome CDS3716278 1518 - 0.658103
paaH PP3755 3-hydroxybutyryl-CoA dehydrogenasechromosome CDS4284594 849 + 0.63722
pcaF PP1377 beta-ketoadipyl CoA thiolase PcaFchromosome CDS1569186 1203 + 0.652535
pcaI PP3951 3-oxoadipate CoA-transferase, subunit Achromosome CDS4457362 696 + 0.639368
pcaJ PP3952 3-oxoadipate CoA-transferase, subunit Bchromosome CDS4458066 642 + 0.630841
pgpA PP0520 phosphatidylglycerophosphatase Achromosome CDS605651 504 + 0.615079
pgsA PP4097 CDP-diacylglycerol--glycerol-3-phosphate3-phosph atidyltransferasechromosome CDS4632689 561 - 0.643494
phaA PP5003 poly(3-hydroxyalkanoate) polymerase 1chromosome CDS5699514 1680 + 0.625595
phaB PP3283 enoyl-CoA hydratase/isomerase PhaBchromosome CDS3717798 792 - 0.657828
phaC PP5005 poly(3-hydroxyalkanoate) polymerase 2chromosome CDS5702157 1683 + 0.637552
phaD PP3280 beta-ketoadipyl CoA thiolase PhaDchromosome CDS3714632 1221 - 0.667486
phaJ1 PP4552 enoyl-CoA hydratase, R-specificchromosome CDS5176175 471 + 0.615711
phaL PP3270 ring-opening enzymechromosome CDS3703944 2055 - 0.651582
plsB PP1520 glycerol-3-phosphate acyltransferasechromosome CDS1725673 2487 - 0.650181
plsC PP1844 1-acyl-sn-glycerol-3-phosphate acyltransferasechromosome CDS2067339 714 - 0.628852
plsX PP1912 fatty acid/phospholipid synthesis protein PlsXchromosome CDS2155556 1011 + 0.632047
psd PP4908 phosphatidylserine decarboxylasechromosome CDS5578674 864 + 0.643519
pssA-1 PP3664 CDP-diacylglycerol--serineO-phosphatidyltransferasechromosome CDS4162129 1329 - 0.647856
pssA-2 PP4677 CDP-diacylglycerol--serineO-phosphatidyltransferasechromosome CDS5315079 852 - 0.632629
tesB PP4762 acyl-CoA thioesterase IIchromosome CDS5421848 870 - 0.644828
uppS PP1595 undecaprenyl diphosphate synthasechromosome CDS1788524 756 + 0.641534