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2024-05-19 11:24:34

Gene list

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COG category: Lipid transport and metabolism
Organism: Thiomicrospira denitrificans ATCC 33889, ATCC 33889

Number of genes found: 42

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Thiomicrospira denitrificans ATCC 33889, ATCC 33889
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA Tmden_1610 Acyl carrier protein (ACP)RecName: Full=Acyl carrier protein; Short=ACP; chromosome CDS1689834 273 - 0.336996
NA Tmden_1156 Phospholipase D/TransphosphatidylaseSubName: Full=Phospholipase D/Transphosphatidylase; chromosome CDS1211967 1326 + 0.3454
NA Tmden_1903 Short-chain dehydrogenase/reductase SDRSubName: Full=Short-chain dehydrogenase/reductase SDR; chromosome CDS1986104 729 - 0.352538
NA Tmden_1772 Fatty acid synthesis plsX proteinRecName: Full=Phosphate acyltransferase; EC=2.3.1.n2; AltName: Full=Acyl-ACP phosphotransacylase; AltName: Full=Acyl-[acyl-carrier-protein]--phosphate acyltransferase; AltName: Full=Phosphate-acyl-ACP acyltransferase; chromosome CDS1856376 999 - 0.377377
NA Tmden_0839 Phosphopantethiene-protein transferaseRecName: Full=Holo-[acyl-carrier-protein] synthase; Short=Holo-ACP synthase; EC=2.7.8.7; AltName: Full=4-phosphopantetheinyl transferase AcpS; chromosome CDS870102 366 - 0.368852
NA Tmden_1586 Short-chain dehydrogenase/reductase SDRSubName: Full=Short-chain dehydrogenase/reductase SDR; chromosome CDS1662020 816 - 0.372549
NA Tmden_1393 Malonyl CoA-acyl carrier protein transacylaseRecName: Full=Malonyl CoA-acyl carrier protein transacylase; EC=2.3.1.39; chromosome CDS1462393 939 - 0.364217
NA Tmden_1227 Short-chain dehydrogenase/reductase SDRSubName: Full=Short-chain dehydrogenase/reductase SDR; chromosome CDS1295261 783 + 0.401022
NA Tmden_1233 CDP-diacylglycerol--glycerol-3-phosphate3-phosph atidyltransferaseSubName: Full=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; EC=2.7.8.5; chromosome CDS1299950 555 + 0.365766
NA Tmden_1490 Phosphatidylglycerophosphatase ARecName: Full=Phosphatidylglycerophosphatase A; EC=3.1.3.27; AltName: Full=Phosphatidylglycerolphosphate phosphatase A; chromosome CDS1566019 507 + 0.398422
NA Tmden_0622 Biotin carboxylase-likeSubName: Full=Pyruvate carboxylase biotin carboxylase subunit; chromosome CDS634552 1458 + 0.372428
NA Tmden_1613 3-oxoacyl-(acyl-carrier-protein) reductaseSubName: Full=3-oxoacyl-[acyl-carrier-protein] reductase; EC=1.1.1.100; chromosome CDS1692563 747 - 0.39759
NA Tmden_0997 Di-trans-poly-cis-decaprenylcistransferaseRecName: Full=Isoprenyl transferase; EC=2.5.1.-; chromosome CDS1048581 678 - 0.365782
NA Tmden_1219 Short-chain dehydrogenase/reductase SDRSubName: Full=Short-chain dehydrogenase/reductase SDR; chromosome CDS1285859 732 + 0.362022
NA Tmden_1669 putative phosphatidylserine decarboxylaseSubName: Full=Putative phosphatidylserine decarboxylase; chromosome CDS1752745 654 - 0.327217
NA Tmden_0128 Type II site-specific deoxyribonucleaseSubName: Full=Type II site-specific deoxyribonuclease; EC=3.1.21.4; chromosome CDS132509 1101 + 0.311535
NA Tmden_1751 enoyl-(acyl-carrier-protein) reductaseRecName: Full=Enoyl-[acyl-carrier-protein] reductase [NADH]; EC=1.3.1.9; chromosome CDS1834951 822 - 0.385645
NA Tmden_0603 Short-chain dehydrogenase/reductase SDRSubName: Full=Short-chain dehydrogenase/reductase SDR; chromosome CDS610863 771 + 0.298314
NA Tmden_0475 Deoxyxylulose-5-phosphate synthaseRecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; EC=2.2.1.7; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS; chromosome CDS478383 1821 + 0.375618
NA Tmden_0872 4-hydroxy-3-methylbut-2-enyl diphosphate reductaseRecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase; EC=1.17.1.2; chromosome CDS900236 828 + 0.321256
NA Tmden_1451 Acetate--CoA ligaseRecName: Full=Acetyl-coenzyme A synthetase; Short=AcCoA synthetase; Short=Acs; EC=6.2.1.1; AltName: Full=Acetate--CoA ligase; AltName: Full=Acyl-activating enzyme; chromosome CDS1521169 1956 - 0.389059
NA Tmden_1462 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZRecName: Full=3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ; EC=4.2.1.59; AltName: Full=(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; Short=(3R)-hydroxymyristoyl-ACP dehydrase; AltName: Full=Beta-hydroxyacyl-ACP dehydratase; chromosome CDS1533715 450 + 0.362222
NA Tmden_1033 Phosphatidylserine decarboxylaseSubName: Full=Phosphatidylserine decarboxylase; EC=4.1.1.65; chromosome CDS1088650 819 + 0.350427
NA Tmden_1834 Membrane proteinSubName: Full=Membrane protein; chromosome CDS1917019 1242 - 0.388889
NA Tmden_0440 4-diphosphocytidyl-2C-methyl-D-erythritol kinaseRecName: Full=4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Short=CMK; EC=2.7.1.148; AltName: Full=4-(cytidine-5-diphospho)-2-C-methyl-D-erythritol kinase; chromosome CDS441872 801 + 0.348315
NA Tmden_0310 Phospholipid/glycerol acyltransferaseSubName: Full=Phospholipid/glycerol acyltransferase; chromosome CDS315204 687 - 0.292576
NA Tmden_1487 2-C-methyl-D-erythritol 4-phosphate cytidylyl transferase/synthaseRecName: Full=Bifunctional enzyme IspD/IspF; Includes: RecName: Full=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; EC=2.7.7.60; AltName: Full=4-diphosphocytidyl-2C-methyl-D-erythritol synthase; AltName: Full=MEP cytidylyltransferase; Short=MCT; Includes: RecName: Full=2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Short=MECDP-synthase; Short=MECPP-synthase; Short=MECPS; EC=4.6.1.12; chromosome CDS1562799 1161 + 0.368648
NA Tmden_2053 Membrane protein involved in aromatic hydrocarbon degradationSubName: Full=Membrane protein involved in aromatic hydrocarbon degradation; chromosome CDS2138986 1203 - 0.368246
NA Tmden_1609 Beta-ketoacyl synthaseRecName: Full=3-oxoacyl-[acyl-carrier-protein] synthase 2; EC=2.3.1.179; chromosome CDS1688516 1218 - 0.404762
NA Tmden_1771 Beta-ketoacyl-acyl carrier protein synthase III (FabH)RecName: Full=3-oxoacyl-[acyl-carrier-protein] synthase 3; EC=2.3.1.180; AltName: Full=3-oxoacyl-[acyl-carrier-protein] synthase III; AltName: Full=Beta-ketoacyl-ACP synthase III; Short=KAS III; chromosome CDS1855378 999 - 0.377377
NA Tmden_0376 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthaseRecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; EC=1.17.7.1; AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; chromosome CDS376919 1059 - 0.392823
NA Tmden_1232 Phospholipid/glycerol acyltransferaseSubName: Full=Phospholipid/glycerol acyltransferase; chromosome CDS1298641 1209 - 0.334988
NA Tmden_1608 Acetyl-CoA carboxylaseRecName: Full=Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Short=ACCase subunit alpha; Short=Acetyl-CoA carboxylase carboxyltransferase subunit alpha; EC=6.4.1.2; chromosome CDS1687564 936 - 0.369658
NA Tmden_1970 Short-chain dehydrogenase/reductase SDRSubName: Full=Short-chain dehydrogenase/reductase SDR; chromosome CDS2052283 1962 - 0.38736
NA Tmden_1182 Phospholipid/glycerol acyltransferaseSubName: Full=Phospholipid/glycerol acyltransferase; chromosome CDS1240367 1806 - 0.328904
NA Tmden_1764 CDP-alcohol phosphatidyltransferaseSubName: Full=CDP-alcohol phosphatidyltransferase; chromosome CDS1847684 558 + 0.342294
NA Tmden_0487 Phospholipid/glycerol acyltransferaseSubName: Full=Phospholipid/glycerol acyltransferase; chromosome CDS491167 699 - 0.34907
NA Tmden_0125 Phosphatidate cytidylyltransferaseRecName: Full=Phosphatidate cytidylyltransferase; EC=2.7.7.41; chromosome CDS130346 756 + 0.403439
NA Tmden_0272 CoA enzyme activaseSubName: Full=CoA enzyme activase; chromosome CDS288604 807 - 0.371747
NA Tmden_1174 Acetyl-CoA carboxylase carboxyl transferase, beta subunitRecName: Full=Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; Short=ACCase subunit beta; Short=Acetyl-CoA carboxylase carboxyltransferase subunit beta; EC=6.4.1.2; chromosome CDS1228088 846 - 0.377069
NA Tmden_0126 1-deoxy-D-xylulose-5-phosphate reductoisomeraseRecName: Full=1-deoxy-D-xylulose 5-phosphate reductoisomerase; Short=DXP reductoisomerase; EC=1.1.1.267; AltName: Full=1-deoxyxylulose-5-phosphate reductoisomerase; AltName: Full=2-C-methyl-D-erythritol 4-phosphate synthase; chromosome CDS131105 1062 + 0.384181
NA Tmden_1856 Short-chain dehydrogenase/reductase SDRSubName: Full=Short-chain dehydrogenase/reductase SDR; chromosome CDS1940540 708 + 0.399718