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2024-05-02 18:29:45

Gene list

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COG category: Lipid transport and metabolism
Organism: Shigella sonnei Ss046, Ss046

Number of genes found: 93

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Shigella sonnei Ss046, Ss046
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SSO_2397 putative enzymechromosome CDS2528857 2145 - 0.519814
NA SSO_3042 putative enzymechromosome CDS3202872 549 + 0.504554
NA SSO_2884 putative dehydrogenasechromosome CDS3025073 909 + 0.532453
NA SSO_2136 conserved hypothetical proteinchromosome CDS2240890 900 + 0.496667
NA SSO_3026 putative synthaseschromosome CDS3182128 1626 - 0.522755
NA SSO_2398 putative acyltransferasechromosome CDS2531001 1311 - 0.559115
NA SSO_2744 conserved hypothetical proteinchromosome CDS2902601 477 + 0.467505
NA SSO_2230 conserved hypothetical proteinchromosome CDS2341615 750 + 0.434667
aas SSO_2996 2-acyl-glycerophospho-ethanolamine acyltransferase; acyl-acyl-carrier protein synthetasechromosome CDS3146177 2160 - 0.526389
accA SSO_0197 acetylCoA carboxylase, carboxytransferase component, alpha subunitchromosome CDS223542 960 + 0.526042
accB SSO_3396 acetylCoA carboxylase, BCCP subunitchromosome CDS3578223 471 + 0.518047
accC SSO_3397 acetyl CoA carboxylase, biotin carboxylase subunitchromosome CDS3578704 1350 + 0.534074
accD SSO_2374 acetylCoA carboxylase, carboxytransferase component, beta subunitchromosome CDS2504780 915 - 0.551913
acp SSO_P086 AcppSS_046 CDS80158 237 - 0.295359
acpD SSO_1734 acyl carrier protein phosphodiesterasechromosome CDS1837533 606 + 0.519802
acpP SSO_1114 acyl carrier proteinchromosome CDS1192906 237 + 0.481013
acpS SSO_2687 CoA:apo-[acyl-carrier-protein]pantetheinephospho transferasechromosome CDS2845683 381 - 0.503937
acs SSO_4250 acetyl-CoA synthetasechromosome CDS4511407 1959 - 0.568147
aidB SSO_4369 putative acyl coenzyme A dehydrogenasechromosome CDS4639509 1641 + 0.542352
atoA SSO_2281 acetyl-CoA:acetoacetyl-CoA transferase beta subunitchromosome CDS2399082 651 + 0.534562
atoB SSO_2283 acetyl-CoA acetyltransferasechromosome CDS2401082 1185 + 0.529114
atoD SSO_2280 acetyl-CoA:acetoacetyl-CoA transferase alpha subunitchromosome CDS2398420 663 + 0.538462
atoE SSO_2282 short chain fatty acid transporterchromosome CDS2399729 1323 + 0.528345
caiA SSO_0047 probable carnitine operon oxidoreductasechromosome CDS48576 1143 - 0.538933
caiC SSO_0043 probable crotonobetaine/carnitine-CoA ligasechromosome CDS44336 1569 - 0.511791
caiD SSO_0042 carnitine racemasechromosome CDS43442 894 - 0.526846
cdh SSO_4087 CDP-diacylglycerol phosphotidylhydrolasechromosome CDS4323971 756 + 0.484127
cdsA SSO_0187 CDP-diglyceride synthetasechromosome CDS210706 750 + 0.502667
cls SSO_1931 cardiolipin synthase, a major membrane phospholipid; novobiocin sensitivitychromosome CDS2027644 1461 + 0.516085
csgE SSO_1048 curli production assembly/transport component, 2nd curli operonchromosome CDS1129783 390 - 0.430769
dxs SSO_0397 1-deoxyxylulose-5-phosphate synthase; flavoproteinchromosome CDS423284 1863 - 0.543747
entA SSO_0547 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase, enterochelin biosynthesischromosome CDS588082 747 + 0.575636
fabA SSO_0958 beta-hydroxydecanoyl thioester dehydrase, trans-2-decenoyl-ACP isomerasechromosome CDS1034045 519 - 0.522158
fabB SSO_2381 3-oxoacyl-[acyl-carrier-protein] synthase Ichromosome CDS2512163 1221 - 0.562654
fabD SSO_1112 malonyl-CoA-[acyl-carrier-protein] transacylasechromosome CDS1191019 930 + 0.550538
fabF SSO_1115 3-oxoacyl-[acyl-carrier-protein] synthase IIchromosome CDS1193230 1242 + 0.533011
fabG SSO_1113 3-oxoacyl-[acyl-carrier-protein] reductasechromosome CDS1191961 735 + 0.517007
fabH SSO_1111 3-oxoacyl-[acyl-carrier-protein] synthase IIIchromosome CDS1190050 954 + 0.548218
fabI SSO_1852 enoyl-[acyl-carrier-protein] reductase (NADH)chromosome CDS1948494 789 + 0.532319
fabZ SSO_0192 (3R)-hydroxymyristol acyl carrier protein dehydratasechromosome CDS217022 456 + 0.504386
fadA SSO_4018 thiolase Ichromosome CDS4244863 1164 - 0.584192
fadB SSO_4019 3-hydroxyacyl-CoAdehydrogenase/3-hydroxybutyryl- CoAepimerase/delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase/enoyl-CoA hydratasechromosome CDS4246036 2190 - 0.552968
fadD SSO_1356 acyl-CoA synthetasechromosome CDS1430364 1686 + 0.511862
fadL SSO_2400 transport of long-chain fatty acids; sensitivity to phage T2chromosome CDS2533141 1347 + 0.500371
gcpE SSO_2597 conserved hypothetical proteinchromosome CDS2744228 1119 - 0.534406
hcaB SSO_2623 2,3-dihydroxy-2,3-dihydrophenylpropionatedehydro genasechromosome CDS2774417 813 + 0.562116
hdhA SSO_1541 NAD-dependent 7alpha-hydroxysteroid dehydrogenase, dehydroxylation of bile acidschromosome CDS1616635 768 + 0.484375
idnO SSO_4451 5-keto-D-gluconate 5-reductasechromosome CDS4723050 765 - 0.494118
kduD SSO_3002 2-deoxy-D-gluconate 3-dehydrogenasechromosome CDS3154779 762 - 0.515748
lytB SSO_0034 control of stringent responsechromosome CDS33443 951 + 0.550999
menE SSO_2321 o-succinylbenzoate-CoA ligasechromosome CDS2449417 1422 - 0.554852
pgpA SSO_0395 phosphatidylglycerophosphatasechromosome CDS421683 519 + 0.529865
pgpB SSO_1862 non-essential phosphatidylglycerophosphate phosphatase, membrane boundchromosome CDS1959442 765 - 0.501961
pgsA SSO_1206 phosphatidylglycerophosphate synthetase CDP-1,2-diacyl-sn-glycero-3-phosphate phosphatidyl transferasechromosome CDS1284532 549 + 0.522769
phoN2/apy SSO_P004 PhoN2 (Apy)pSS_046 CDS2371 741 + 0.425101
pldB SSO_3999 lysophospholipase L(2)chromosome CDS4223260 1023 + 0.535679
plsB SSO_4221 glycerol-3-phosphate acyltransferasechromosome CDS4478466 2484 - 0.549517
plsC SSO_3160 1-acyl-sn-glycerol-3-phosphate acyltransferasechromosome CDS3319071 738 - 0.495935
plsX SSO_1110 glycerolphosphate auxotrophy in plsB backgroundchromosome CDS1188942 1041 + 0.519693
psd SSO_4345 phosphatidylserine decarboxylase; phospholipid synthesischromosome CDS4616119 969 - 0.532508
pssA SSO_2711 phosphatidylserine synthase; phospholipid synthesischromosome CDS2869057 1359 + 0.488595
sbm SSO_3068 methylmalonyl-CoA mutase (MCM)chromosome CDS3231045 2145 + 0.547319
sbmA SSO_0352 sensitivity to microcin B17, possibly envelop proteinchromosome CDS379444 1221 + 0.511876
sorD SSO_4198 putative sorbitol-6-phosphate 2-dehydrogenasechromosome CDS4449884 807 - 0.51425
tesB SSO_0440 acyl-CoA thioesterase IIchromosome CDS466498 861 - 0.526132
ucpA SSO_2515 putative oxidoreductasechromosome CDS2652770 858 - 0.539627
wecF SSO_3966 TDP-Fuc4NAc:lipidII transferasechromosome CDS4189291 1353 + 0.526977
yaeM SSO_0185 putative ATP-binding component of a transport systemchromosome CDS208442 1197 + 0.52381
yaeS SSO_0186 conserved hypothetical proteinchromosome CDS209824 762 + 0.497375
yafH SSO_0263 putative acyl-CoA dehydrogenasechromosome CDS291006 2481 - 0.565901
ybaC SSO_0463 putative lipasechromosome CDS491098 960 - 0.515625
ybbO SSO_0482 putative oxidoreductasechromosome CDS511590 810 - 0.538272
ybdU SSO_0566 conserved hypothetical proteinchromosome CDS606487 552 - 0.586957
ybhO SSO_0768 putative synthetasechromosome CDS811368 1242 - 0.549114
ybjG SSO_0826 conserved hypothetical proteinchromosome CDS879597 597 - 0.517588
ychB SSO_1970 conserved hypothetical proteinchromosome CDS2071879 852 + 0.53169
yciA SSO_1913 conserved hypothetical proteinchromosome CDS2007467 399 + 0.486216
yciK SSO_1872 putative oxidoreductasechromosome CDS1971200 759 + 0.527009
ydgB SSO_1554 putative oxidoreductasechromosome CDS1632975 723 - 0.517289
ygbB SSO_2894 conserved hypothetical proteinchromosome CDS3034945 480 - 0.5375
ygbP SSO_2895 conserved hypothetical proteinchromosome CDS3035424 711 - 0.552743
ygfF SSO_3055 putative oxidoreductasechromosome CDS3214964 744 - 0.544355
ygfG SSO_3070 putative enzymechromosome CDS3234146 828 + 0.479469
yghA SSO_3147 putative oxidoreductasechromosome CDS3306100 885 + 0.546893
yhaE SSO_3280 putative dehydrogenasechromosome CDS3456331 900 - 0.527778
yhbT SSO_3303 conserved hypothetical proteinchromosome CDS3477565 525 - 0.51619
yihG SSO_4035 putative endonucleasechromosome CDS4262609 933 - 0.453376
yihU SSO_4048 putative dehydrogenasechromosome CDS4281898 879 + 0.517634
yjgI SSO_4429 putative oxidoreductasechromosome CDS4699793 714 - 0.540616
ymdC SSO_1059 putative synthasechromosome CDS1137608 1482 + 0.505398
ynbD SSO_1735 putative enzymechromosome CDS1838189 1293 - 0.499613
yohF SSO_2194 putative oxidoreductasechromosome CDS2299442 762 - 0.553806
yqeF SSO_3004 putative acyltransferasechromosome CDS3156728 1185 - 0.537553