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2024-05-21 04:29:11

Gene list

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COG category: Lipid transport and metabolism
Organism: Shigella dysenteriae Sd197, Sd197

Number of genes found: 79

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Shigella dysenteriae Sd197, Sd197
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA SDY_0676 putative glutamate mutase SRecName: Full=Glutamate mutase sigma subunit; EC=5.4.99.1; AltName: Full=Glutamate mutase S chain; AltName: Full=Glutamate mutase small subunit; AltName: Full=Methylaspartate mutase; chromosome CDS640061 513 - 0.477583
NA SDY_0905 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS854744 750 - 0.434667
NA SDY_3090 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2865287 1623 - 0.529883
NA SDY_3193 putative enzymeRecName: Full=Isopentenyl-diphosphate Delta-isomerase; Short=IPP isomerase; EC=5.3.3.2; AltName: Full=IPP:DMAPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase; chromosome CDS2960429 549 - 0.504554
NA SDY_2543 putative acyltransferaseRecName: Full=3-ketoacyl-CoA thiolase; EC=2.3.1.16; AltName: Full=ACSs; AltName: Full=Acetyl-CoA acyltransferase; AltName: Full=Acyl-CoA ligase; AltName: Full=Beta-ketothiolase; AltName: Full=Fatty acid oxidation complex subunit beta; chromosome CDS2340130 1311 - 0.558352
NA SDY_2792 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2585800 477 - 0.471698
NA SDY_2542 putative enzymeRecName: Full=Fatty acid oxidation complex subunit alpha; Includes: RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA epimerase; EC=4.2.1.17; EC=5.1.2.3; Includes: RecName: Full=3-hydroxyacyl-CoA dehydrogenase; EC=1.1.1.35; chromosome CDS2337986 2145 - 0.51655
NA SDY_1783 putative oxidoreductaseSubName: Full=Putative oxidoreductase; chromosome CDS1622339 1206 + 0.516584
NA SDY_3629 putative beta-ketoacyl-ACP synthaseSubName: Full=Putative beta-ketoacyl-ACP synthase; chromosome CDS3363131 1230 + 0.55122
NA SDY_2261 conserved hypothetical proteinRecName: Full=Probable lipid kinase YegS; EC=2.7.1.-; chromosome CDS2057377 900 + 0.495556
NA SDY_1517 putative cytochrome oxidaseSubName: Full=Putative cytochrome oxidase; chromosome CDS1389710 468 + 0.540598
NA SDY_1472 probable enzymeSubName: Full=Probable enzyme; chromosome CDS1352732 615 + 0.443902
aas SDY_3053 2-acyl-glycerophospho-ethanolamineacyltransferas eSubName: Full=2-acyl-glycerophospho-ethanolamine acyltransferase; chromosome CDS2830485 2160 - 0.524074
accA SDY_0201 acetylCoA carboxylase, carboxytransferase component, alpha subunitRecName: Full=Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Short=ACCase subunit alpha; Short=Acetyl-CoA carboxylase carboxyltransferase subunit alpha; EC=6.4.1.2; chromosome CDS208883 960 + 0.529167
accB SDY_3432 acetylCoA carboxylase, BCCP subunitSubName: Full=AcetylCoA carboxylase, BCCP subunit; chromosome CDS3189930 471 + 0.52017
accC SDY_3433 acetyl CoA carboxylase, biotin carboxylase subunitSubName: Full=Acetyl CoA carboxylase, biotin carboxylase subunit; chromosome CDS3190411 1350 + 0.533333
accD SDY_2515 acetylCoA carboxylase, carboxytransferase component, beta subunitRecName: Full=Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; Short=ACCase subunit beta; Short=Acetyl-CoA carboxylase carboxyltransferase subunit beta; EC=6.4.1.2; chromosome CDS2313699 915 - 0.55082
acpD SDY_1775 acyl carrier protein phosphodiesteraseRecName: Full=FMN-dependent NADH-azoreductase; EC=1.7.-.-; AltName: Full=Azo-dye reductase; AltName: Full=FMN-dependent NADH-azo compound oxidoreductase; chromosome CDS1615940 606 + 0.516502
acpP SDY_2056 acyl carrier proteinRecName: Full=Acyl carrier protein; Short=ACP; chromosome CDS1868138 237 - 0.481013
acpS SDY_2804 CoA:apo-[acyl-carrier-protein]pantetheinephospho transferaseRecName: Full=Holo-[acyl-carrier-protein] synthase; Short=Holo-ACP synthase; EC=2.7.8.7; AltName: Full=4-phosphopantetheinyl transferase AcpS; chromosome CDS2595458 381 - 0.51706
aidB SDY_4404 putative acyl coenzyme A dehydrogenaseSubName: Full=Putative acyl coenzyme A dehydrogenase; chromosome CDS4120512 1629 + 0.537753
caiA SDY_0061 probable carnitine operon oxidoreductaseRecName: Full=Crotonobetainyl-CoA dehydrogenase; EC=1.3.99.-; AltName: Full=Crotonobetainyl-CoA reductase; chromosome CDS57997 1143 - 0.538933
caiC SDY_0059 probable crotonobetaine/carnitine-CoA ligaseRecName: Full=Probable crotonobetaine/carnitine-CoA ligase; EC=6.2.1.-; chromosome CDS55024 1569 - 0.506055
caiD SDY_0058 carnitine racemaseRecName: Full=Carnitinyl-CoA dehydratase; EC=4.2.1.149; AltName: Full=Crotonobetainyl-CoA hydratase; chromosome CDS54130 894 - 0.526846
cdsA SDY_0191 CDP-diglyceride synthetaseRecName: Full=Phosphatidate cytidylyltransferase; EC=2.7.7.41; chromosome CDS196047 750 + 0.502667
cls SDY_1307 cardiolipin synthaseRecName: Full=Cardiolipin synthase A; Short=CL synthase; EC=2.7.8.-; chromosome CDS1211563 1461 - 0.514031
csgE SDY_0997 curli production assembly/transport componentSubName: Full=Curli production assembly/transport component; chromosome CDS946490 390 + 0.433333
dxs SDY_0310 1-deoxyxylulose-5-phosphate synthaseRecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; EC=2.2.1.7; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS; chromosome CDS301557 1863 + 0.536769
entA SDY_0527 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenaseSubName: Full=2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; chromosome CDS513759 747 + 0.575636
fabA SDY_0927 beta-hydroxydecanoyl thioester dehydraseRecName: Full=3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase; EC=4.2.1.59; AltName: Full=3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA; AltName: Full=Beta-hydroxydecanoyl thioester dehydrase; AltName: Full=Trans-2-decenoyl-[acyl-carrier-protein] isomerase; EC=5.3.3.14; chromosome CDS877293 519 - 0.524085
fabB SDY_2522 3-oxoacyl-[acyl-carrier-protein] synthase ISubName: Full=3-oxoacyl-[acyl-carrier-protein] synthase I; chromosome CDS2320477 1221 - 0.562654
fabD SDY_2058 malonyl-CoA-[acyl-carrier-protein] transacylaseRecName: Full=Malonyl CoA-acyl carrier protein transacylase; EC=2.3.1.39; chromosome CDS1869332 930 - 0.547312
fabF SDY_2055 3-oxoacyl-[acyl-carrier-protein] synthase IIRecName: Full=3-oxoacyl-[acyl-carrier-protein] synthase 2; EC=2.3.1.179; chromosome CDS1866811 1242 - 0.532206
fabG SDY_2057 3-oxoacyl-[acyl-carrier-protein] reductaseSubName: Full=3-oxoacyl-[acyl-carrier-protein] reductase; chromosome CDS1868585 735 - 0.512925
fabH SDY_2059 3-oxoacyl-[acyl-carrier-protein] synthase IIIRecName: Full=3-oxoacyl-[acyl-carrier-protein] synthase 3; EC=2.3.1.180; AltName: Full=3-oxoacyl-[acyl-carrier-protein] synthase III; AltName: Full=Beta-ketoacyl-ACP synthase III; Short=KAS III; chromosome CDS1870277 954 - 0.546122
fabI SDY_1368 enoyl-[acyl-carrier-protein] reductase (NADH)RecName: Full=Enoyl-[acyl-carrier-protein] reductase [NADH]; EC=1.3.1.9; chromosome CDS1264141 789 - 0.532319
fabZ SDY_0196 (3R)-hydroxymyristol acyl carrier protein dehydrataseRecName: Full=3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ; EC=4.2.1.59; AltName: Full=(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; Short=(3R)-hydroxymyristoyl-ACP dehydrase; AltName: Full=Beta-hydroxyacyl-ACP dehydratase; chromosome CDS202363 456 + 0.502193
fadA SDY_3900 thiolase IRecName: Full=3-ketoacyl-CoA thiolase; EC=2.3.1.16; AltName: Full=Acetyl-CoA acyltransferase; AltName: Full=Beta-ketothiolase; AltName: Full=Fatty acid oxidation complex subunit beta; chromosome CDS3631690 1164 + 0.573024
fadB SDY_3899 3-hydroxyacyl-CoAdehydrogenase/3-hydroxybutyryl- CoAepimerase/delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase/enoyl-CoA hydrataseRecName: Full=Fatty acid oxidation complex subunit alpha; Includes: RecName: Full=Enoyl-CoA hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA isomerase/3-hydroxybutyryl-CoA epimerase; EC=4.2.1.17; EC=5.1.2.3; EC=5.3.3.8; Includes: RecName: Full=3-hydroxyacyl-CoA dehydrogenase; EC=1.1.1.35; chromosome CDS3629491 2190 + 0.552055
fadD SDY_1709 acyl-CoA synthetaseSubName: Full=Acyl-CoA synthetase; chromosome CDS1561171 1686 - 0.513049
fadL SDY_2545 FadLSubName: Full=FadL; chromosome CDS2342270 1347 + 0.501114
gcpE SDY_2711 conserved hypothetical proteinRecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; EC=1.17.7.1; AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; chromosome CDS2503964 1119 - 0.537087
hdhA SDY_1838 NAD-dependent 7alpha-hydroxysteroid dehydrogenaseSubName: Full=NAD-dependent 7alpha-hydroxysteroid dehydrogenase; chromosome CDS1674498 768 - 0.473958
lytB SDY_0051 control of stringent responseRecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase; EC=1.17.1.2; chromosome CDS45029 951 + 0.548896
menE SDY_2456 o-succinylbenzoate-CoA ligaseSubName: Full=O-succinylbenzoate-CoA ligase; chromosome CDS2256592 1356 - 0.561209
pgpA SDY_0316 phosphatidylglycerophosphataseRecName: Full=Phosphatidylglycerophosphatase A; EC=3.1.3.27; AltName: Full=Phosphatidylglycerolphosphate phosphatase A; chromosome CDS306805 516 - 0.523256
pgpB SDY_1354 non-essential phosphatidylglycerophosphate phosphatase, membrane boundSubName: Full=Non-essential phosphatidylglycerophosphate phosphatase, membrane bound; chromosome CDS1251915 765 + 0.501961
pgsA SDY_1106 phosphatidylglycerophosphate synthetase CDP-1,2-diacyl-sn-glycero-3-phosphate phosphatidyl transferaseRecName: Full=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; EC=2.7.8.5; AltName: Full=Phosphatidylglycerophosphate synthase; Short=PGP synthase; chromosome CDS1032286 549 + 0.52459
pldB SDY_3918 lysophospholipase L(2)SubName: Full=Lysophospholipase L(2); chromosome CDS3650080 1023 - 0.535679
plsB SDY_4533 glycerol-3-phosphate acyltransferaseRecName: Full=Glycerol-3-phosphate acyltransferase; Short=GPAT; EC=2.3.1.15; chromosome CDS4239655 2484 + 0.549114
plsC SDY_3219 1-acyl-sn-glycerol-3-phosphate acyltransferaseSubName: Full=1-acyl-sn-glycerol-3-phosphate acyltransferase; chromosome CDS2982549 738 + 0.48916
plsX SDY_2060 glycerolphosphate auxotrophy in plsB backgroundRecName: Full=Phosphate acyltransferase; EC=2.3.1.n2; AltName: Full=Acyl-ACP phosphotransacylase; AltName: Full=Acyl-[acyl-carrier-protein]--phosphate acyltransferase; AltName: Full=Phosphate-acyl-ACP acyltransferase; chromosome CDS1871298 1041 - 0.519693
psd SDY_4432 phosphatidylserine decarboxylaseRecName: Full=Phosphatidylserine decarboxylase proenzyme; EC=4.1.1.65; Contains: RecName: Full=Phosphatidylserine decarboxylase alpha chain; Contains: RecName: Full=Phosphatidylserine decarboxylase beta chain; chromosome CDS4145014 969 + 0.531476
pssA SDY_2828 phosphatidylserine synthaseSubName: Full=Phosphatidylserine synthase; chromosome CDS2618580 1359 + 0.490066
sbmA SDY_0369 sensitivity to microcin B17SubName: Full=Sensitivity to microcin B17; chromosome CDS355744 1221 - 0.510238
srlD SDY_2902 glucitol-6-phosphate dehydrogenaseSubName: Full=Glucitol-6-phosphate dehydrogenase; chromosome CDS2682458 780 + 0.528205
tesB SDY_0389 acyl-CoA thioesterase IISubName: Full=Acyl-CoA thioesterase II; chromosome CDS374581 861 - 0.524971
ucpA SDY_2622 putative oxidoreductaseSubName: Full=Putative oxidoreductase; chromosome CDS2416333 858 - 0.532634
yaeM SDY_0189 putative ATP-binding component of a transport systemRecName: Full=1-deoxy-D-xylulose 5-phosphate reductoisomerase; Short=DXP reductoisomerase; EC=1.1.1.267; AltName: Full=1-deoxyxylulose-5-phosphate reductoisomerase; AltName: Full=2-C-methyl-D-erythritol 4-phosphate synthase; chromosome CDS193783 1197 + 0.524645
yaeS SDY_0190 conserved hypothetical proteinRecName: Full=Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific); EC=2.5.1.31; AltName: Full=Ditrans,polycis-undecaprenylcistransferase; AltName: Full=Undecaprenyl diphosphate synthase; AltName: Full=Undecaprenyl pyrophosphate synthase; chromosome CDS195165 762 + 0.497375
ybbO SDY_0406 putative oxidoreductaseSubName: Full=Putative oxidoreductase; chromosome CDS390370 810 + 0.540741
ybhO SDY_0814 putative synthetaseSubName: Full=Putative synthetase; chromosome CDS760713 1233 + 0.541768
ybjG SDY_0843 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS786089 597 - 0.519263
ychB SDY_1257 conserved hypothetical proteinRecName: Full=4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Short=CMK; EC=2.7.1.148; AltName: Full=4-(cytidine-5-diphospho)-2-C-methyl-D-erythritol kinase; chromosome CDS1164117 852 - 0.530516
yciA SDY_1317 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1220950 399 - 0.486216
yciK SDY_1341 putative oxidoreductaseSubName: Full=Putative oxidoreductase; chromosome CDS1238903 759 - 0.520422
ydgB SDY_1547 putative oxidoreductaseRecName: Full=Dihydrofolate reductase FolM; Short=DHFR; EC=1.5.1.3; chromosome CDS1414420 723 - 0.507607
ygbB SDY_2945 conserved hypothetical proteinRecName: Full=2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Short=MECDP-synthase; Short=MECPP-synthase; Short=MECPS; EC=4.6.1.12; chromosome CDS2724416 480 - 0.535417
ygbP SDY_2946 conserved hypothetical proteinRecName: Full=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; EC=2.7.7.60; AltName: Full=4-diphosphocytidyl-2C-methyl-D-erythritol synthase; AltName: Full=MEP cytidylyltransferase; Short=MCT; chromosome CDS2724895 711 - 0.552743
ygcW SDY_2976 putative oxidoreductaseSubName: Full=Putative oxidoreductase; chromosome CDS2749916 786 - 0.452926
yghA SDY_3069 putative oxidoreductaseSubName: Full=Putative oxidoreductase; chromosome CDS2846431 885 - 0.541243
yhaE SDY_3319 putative dehydrogenaseSubName: Full=Putative dehydrogenase; chromosome CDS3078250 900 - 0.521111
yhbT SDY_3336 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3091464 525 - 0.52
yihG SDY_3880 putative endonucleaseSubName: Full=Putative endonuclease; chromosome CDS3612493 933 + 0.453376
yjgI SDY_4267 putative oxidoreductaseSubName: Full=Putative oxidoreductase; chromosome CDS3998900 714 - 0.542017
yjiL SDY_4596 putative enzymeSubName: Full=Putative enzyme; chromosome CDS4305059 774 - 0.564599
ymdC SDY_2304 putative synthaseSubName: Full=Putative synthase; chromosome CDS2093395 1482 - 0.49865
ynbD SDY_1776 YnbDSubName: Full=YnbD; chromosome CDS1616599 1026 - 0.503899
yohF SDY_2151 putative oxidoreductaseSubName: Full=Putative oxidoreductase; chromosome CDS1949351 762 + 0.551181