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2024-05-18 09:09:22

Gene list

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COG category: Lipid transport and metabolism
Organism: Shigella flexneri 2a str. 2457T, 2457T

Number of genes found: 89

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Shigella flexneri 2a str. 2457T, 2457T
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA S3222 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3107379 1689 + 0.529307
NA S2555 putative acyltransferaseRecName: Full=3-ketoacyl-CoA thiolase; EC=2.3.1.16; AltName: Full=ACSs; AltName: Full=Acetyl-CoA acyltransferase; AltName: Full=Acyl-CoA ligase; AltName: Full=Beta-ketothiolase; AltName: Full=Fatty acid oxidation complex subunit beta; chromosome CDS2447579 1311 - 0.555301
NA S2390 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2271510 714 + 0.438375
NA S4547 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS4452843 792 + 0.540404
NA S1732 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1670434 369 - 0.536585
NA S1582 putative cytochrome oxidaseSubName: Full=Putative cytochrome oxidase; chromosome CDS1541059 621 + 0.536232
NA S2274 hypothetical proteinRecName: Full=Probable lipid kinase YegS; EC=2.7.1.-; chromosome CDS2157738 900 + 0.494444
NA S1464 probable enzymeSubName: Full=Probable enzyme; chromosome CDS1428444 606 + 0.458746
NA S2856 hypothetical proteinRecName: Full=Ribosome association toxin RatA; chromosome CDS2747461 438 - 0.488584
NA S4804 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS327572 1173 + 0.339301
NA S2554 putative enzymeRecName: Full=Fatty acid oxidation complex subunit alpha; Includes: RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA epimerase; EC=4.2.1.17; EC=5.1.2.3; Includes: RecName: Full=3-hydroxyacyl-CoA dehydrogenase; EC=1.1.1.35; chromosome CDS2445435 2145 - 0.52028
NA S3224 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3110011 249 + 0.405622
NA S3074 putative enzymeRecName: Full=Isopentenyl-diphosphate Delta-isomerase; Short=IPP isomerase; EC=5.3.3.2; AltName: Full=IPP:DMAPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase; chromosome CDS2959070 549 + 0.513661
aas S3044 2-acyl-glycerophospho-ethanolamine acyltransferase; acyl-acyl-carrier protein synthetaseRecName: Full=Bifunctional protein Aas; Includes: RecName: Full=2-acylglycerophosphoethanolamine acyltransferase; EC=2.3.1.40; AltName: Full=2-acyl-GPE acyltransferase; AltName: Full=Acyl-[acyl-carrier-protein]--phospholipid O-acyltransferase; Includes: RecName: Full=Acyl-[acyl-carrier-protein] synthetase; EC=6.2.1.20; AltName: Full=Acyl-ACP synthetase; AltName: Full=Long-chain-fatty-acid--[acyl-carrier-protein] ligase; chromosome CDS2928896 2160 - 0.525
accA S0178 acetyl CoA carboxylase, carboxytransferase component, alpha subunitRecName: Full=Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Short=ACCase subunit alpha; Short=Acetyl-CoA carboxylase carboxyltransferase subunit alpha; EC=6.4.1.2; chromosome CDS199052 960 + 0.527083
accB S3510 acetyl CoA carboxylase, carrier of biotin, BCCP subunitRecName: Full=Biotin carboxyl carrier protein of acetyl-CoA carboxylase; Short=BCCP; chromosome CDS3383090 471 + 0.518047
accC S3511 acetyl CoA carboxylase, biotin carboxylase subunitSubName: Full=Acetyl CoA carboxylase, biotin carboxylase subunit; chromosome CDS3383571 1350 + 0.534074
accD S2527 acetyl CoA carboxylase, carboxytransferase component, beta subunitRecName: Full=Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; Short=ACCase subunit beta; Short=Acetyl-CoA carboxylase carboxyltransferase subunit beta; EC=6.4.1.2; chromosome CDS2420581 915 - 0.551913
acpD S1471 acyl carrier protein phosphodiesteraseRecName: Full=FMN-dependent NADH-azoreductase; EC=1.7.-.-; AltName: Full=Azo-dye reductase; AltName: Full=FMN-dependent NADH-azo compound oxidoreductase; chromosome CDS1434338 606 - 0.516502
acpP S1178 acyl carrier proteinRecName: Full=Acyl carrier protein; Short=ACP; AltName: Full=Cytosolic-activating factor; Short=CAF; AltName: Full=Fatty acid synthase acyl carrier protein; chromosome CDS1142224 237 + 0.481013
acpS S2798 CoA:apo-[acyl-carrier-protein]pantetheinephospho transferaseRecName: Full=Holo-[acyl-carrier-protein] synthase; Short=Holo-ACP synthase; EC=2.7.8.7; AltName: Full=4-phosphopantetheinyl transferase AcpS; chromosome CDS2691277 381 - 0.503937
caiA S0038 probable carnitine operon oxidoreductaseRecName: Full=Crotonobetainyl-CoA dehydrogenase; EC=1.3.99.-; AltName: Full=Crotonobetainyl-CoA reductase; chromosome CDS38160 1143 - 0.538933
caiC S0036 probable crotonobetaine/carnitine-CoA ligaseRecName: Full=Probable crotonobetaine/carnitine-CoA ligase; EC=6.2.1.-; chromosome CDS35187 1569 - 0.50733
caiD S0035 carnitine racemaseRecName: Full=Carnitinyl-CoA dehydratase; EC=4.2.1.149; AltName: Full=Crotonobetainyl-CoA hydratase; chromosome CDS34293 894 - 0.52349
cdh S3751 CDP-diacylglycerol phosphotidylhydrolaseRecName: Full=CDP-diacylglycerol pyrophosphatase; EC=3.6.1.26; AltName: Full=CDP-diacylglycerol phosphatidylhydrolase; AltName: Full=CDP-diglyceride hydrolase; chromosome CDS3647551 756 - 0.486772
cdsA S0168 CDP-diglyceride synthetaseRecName: Full=Phosphatidate cytidylyltransferase; EC=2.7.7.41; AltName: Full=CDP-DAG synthase; AltName: Full=CDP-DG synthase; AltName: Full=CDP-diacylglycerol synthase; Short=CDS; AltName: Full=CDP-diglyceride pyrophosphorylase; AltName: Full=CDP-diglyceride synthase; AltName: Full=CTP:phosphatidate cytidylyltransferase; chromosome CDS186216 750 + 0.501333
cls S1336 cardiolipin synthaseRecName: Full=Cardiolipin synthase A; Short=CL synthase; EC=2.7.8.-; chromosome CDS1302133 1461 - 0.516085
csgE S1106 Curli production assembly/transport component CsgE precursorSubName: Full=Curli production assembly/transport component CsgE; chromosome CDS1081204 390 - 0.428205
dxs S0365 1-deoxyxylulose-5-phosphate synthase; flavoproteinRecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; EC=2.2.1.7; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS; chromosome CDS366822 1863 - 0.538916
entA S0516 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenaseSubName: Full=2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; chromosome CDS527806 747 + 0.575636
fabA S1020 beta-hydroxydecanoyl thioester dehydrase, trans-2-decenoyl-ACP isomeraseRecName: Full=3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase; EC=4.2.1.59; AltName: Full=3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA; AltName: Full=Beta-hydroxydecanoyl thioester dehydrase; AltName: Full=Trans-2-decenoyl-[acyl-carrier-protein] isomerase; EC=5.3.3.14; chromosome CDS1006984 519 - 0.522158
fabB S2534 3-oxoacyl-[acyl-carrier-protein] synthase ISubName: Full=3-oxoacyl-[acyl-carrier-protein] synthase I; chromosome CDS2427944 1242 - 0.561192
fabD S1176 malonyl-CoA-[acyl-carrier-protein] transacylaseRecName: Full=Malonyl CoA-acyl carrier protein transacylase; EC=2.3.1.39; chromosome CDS1140337 930 + 0.550538
fabF S1179 3-oxoacyl-[acyl-carrier-protein] synthase IIRecName: Full=3-oxoacyl-[acyl-carrier-protein] synthase 2; EC=2.3.1.179; AltName: Full=3-oxoacyl-[acyl-carrier-protein] synthase II; AltName: Full=Beta-ketoacyl-ACP synthase II; Short=KAS II; chromosome CDS1142547 1242 + 0.533011
fabG S1177 3-oxoacyl-[acyl-carrier-protein] reductaseRecName: Full=3-oxoacyl-[acyl-carrier-protein] reductase FabG; EC=1.1.1.100; AltName: Full=3-ketoacyl-acyl carrier protein reductase; AltName: Full=Beta-Ketoacyl-acyl carrier protein reductase; AltName: Full=Beta-ketoacyl-ACP reductase; chromosome CDS1141279 735 + 0.514286
fabH S1175 3-oxoacyl-[acyl-carrier-protein] synthase III; acetyl CoA ACP transacylaseRecName: Full=3-oxoacyl-[acyl-carrier-protein] synthase 3; EC=2.3.1.180; AltName: Full=3-oxoacyl-[acyl-carrier-protein] synthase III; AltName: Full=Beta-ketoacyl-ACP synthase III; Short=KAS III; chromosome CDS1139368 954 + 0.544025
fabI S1375 enoyl-[acyl-carrier-protein] reductase (NADH)RecName: Full=Enoyl-[acyl-carrier-protein] reductase [NADH] FabI; Short=ENR; EC=1.3.1.9; AltName: Full=NADH-dependent enoyl-ACP reductase; chromosome CDS1344389 789 - 0.532319
fabZ S0173 (3R)-hydroxymyristol acyl carrier protein dehydrataseRecName: Full=3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ; EC=4.2.1.59; AltName: Full=(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; Short=(3R)-hydroxymyristoyl-ACP dehydrase; AltName: Full=Beta-hydroxyacyl-ACP dehydratase; chromosome CDS192532 456 + 0.504386
fadA S3831 thiolase I, 3-ketoacyl-CoA thiolase, acetyl-CoA transferaseRecName: Full=3-ketoacyl-CoA thiolase; EC=2.3.1.16; AltName: Full=Acetyl-CoA acyltransferase; AltName: Full=Beta-ketothiolase; AltName: Full=Fatty acid oxidation complex subunit beta; chromosome CDS3731589 1164 + 0.582474
fadB S3830 4-enzyme protein, 3-hydroxyacyl-CoA dehydrogenase; 3-hydroxybutyryl-CoA epimerase; delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase; enoyl-CoA hydratasRecName: Full=Fatty acid oxidation complex subunit alpha; Includes: RecName: Full=Enoyl-CoA hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA isomerase/3-hydroxybutyryl-CoA epimerase; EC=4.2.1.17; EC=5.1.2.3; EC=5.3.3.8; Includes: RecName: Full=3-hydroxyacyl-CoA dehydrogenase; EC=1.1.1.35; chromosome CDS3729390 2190 + 0.551142
fadD S1538 acyl-CoA synthetase, long-chain-fatty-acid--CoA ligaseSubName: Full=Acyl-CoA synthetase, long-chain-fatty-acid--CoA ligase; chromosome CDS1497407 1752 + 0.511986
fadL S2557 transport of long-chain fatty acidsRecName: Full=Long-chain fatty acid transport protein; AltName: Full=Outer membrane FadL protein; AltName: Full=Outer membrane flp protein; Flags: Precursor; chromosome CDS2449725 1341 + 0.499627
gcpE S2733 hypothetical proteinRecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; EC=1.17.7.1; AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; chromosome CDS2623719 1128 - 0.531915
hcaB S2760 2,3-dihydroxy-2,3-dihydrophenylpropionatedehydro genaseRecName: Full=3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase; EC=1.3.1.87; AltName: Full=2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; AltName: Full=3-(cis-5,6-dihydroxycyclohexa-1,3-dien-1-yl)propanoate dehydrogenase; AltName: Full=CI-dihydrodiol dehydrogenase; AltName: Full=Cis-3-(2-carboxyethenyl)-3,5-cyclohexadiene-1,2-diol dehydrogenase; AltName: Full=Cis-3-(2-carboxyethyl)-3,5-cyclohexadiene-1,2-diol dehydrogenase; AltName: Full=PP-dihydrodiol dehydrogenase; chromosome CDS2649665 813 + 0.560886
kduD S3050 2-deoxy-D-gluconate 3-dehydrogenaseSubName: Full=2-deoxy-D-gluconate 3-dehydrogenase; chromosome CDS2937539 762 - 0.519685
lytB S0028 LytB proteinRecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase; EC=1.17.1.2; chromosome CDS25193 951 + 0.550999
menE S2473 O-succinylbenzoate-CoA ligaseSubName: Full=O-succinylbenzoate-CoA ligase; chromosome CDS2365835 1356 - 0.561947
pgpA S0363 phosphatidylglycerophosphataseRecName: Full=Phosphatidylglycerophosphatase A; EC=3.1.3.27; AltName: Full=Phosphatidylglycerolphosphate phosphatase A; chromosome CDS365221 519 + 0.527938
pgpB S1365 non-essential phosphatidylglycerophosphate phosphataseRecName: Full=Phosphatidylglycerophosphatase B; EC=3.1.3.27; AltName: Full=Diacylglycerol pyrophosphate phosphatase; Short=DGPP phosphatase; EC=3.1.3.81; AltName: Full=Phosphatidate phosphatase; EC=3.1.3.4; AltName: Full=Undecaprenyl pyrophosphate phosphatase; EC=3.6.1.27; AltName: Full=Undecaprenyl-diphosphatase; chromosome CDS1333481 765 + 0.500654
pgsA S2051 phosphatidylglycerophosphate synthetase, CDP-1,2-diacyl-sn-glycero-3-phosphate phosphatidyl transferaseRecName: Full=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; EC=2.7.8.5; AltName: Full=Phosphatidylglycerophosphate synthase; Short=PGP synthase; chromosome CDS1965207 549 - 0.52459
pldB S3852 lysophospholipase L(2)SubName: Full=Lysophospholipase L(2); chromosome CDS3749977 1023 - 0.536657
plsB S3567 glycerol-3-phosphate acyltransferaseRecName: Full=Glycerol-3-phosphate acyltransferase; Short=GPAT; EC=2.3.1.15; chromosome CDS3435891 2484 - 0.548309
plsC S3266 1-acyl-sn-glycerol-3-phosphate acyltransferaseSubName: Full=1-acyl-sn-glycerol-3-phosphate acyltransferase; chromosome CDS3146848 738 - 0.49458
plsX S1174 PlsX proteinRecName: Full=Phosphate acyltransferase; EC=2.3.1.n2; AltName: Full=Acyl-ACP phosphotransacylase; AltName: Full=Acyl-[acyl-carrier-protein]--phosphate acyltransferase; AltName: Full=Phosphate-acyl-ACP acyltransferase; chromosome CDS1138260 1041 + 0.519693
psd S4582 phosphatidylserine decarboxylaseRecName: Full=Phosphatidylserine decarboxylase proenzyme; EC=4.1.1.65; Contains: RecName: Full=Phosphatidylserine decarboxylase alpha chain; Contains: RecName: Full=Phosphatidylserine decarboxylase beta chain; chromosome CDS4486138 969 - 0.530444
pssA S2820 phosphatidylserine synthaseSubName: Full=Phosphatidylserine synthase; chromosome CDS2713212 1356 + 0.490413
sbm S3102 methylmalonyl-CoA mutase (MCM)SubName: Full=Methylmalonyl-CoA mutase (MCM); chromosome CDS2987200 2145 + 0.547319
sbmA S0258 possible envelope proteinSubName: Full=Possible envelope protein; chromosome CDS261827 1221 - 0.510238
sorD S3637 putative sorbitol-6-phosphate 2-dehydrogenaseSubName: Full=Putative sorbitol-6-phosphate 2-dehydrogenase; chromosome CDS3519483 807 + 0.509294
srlD S2919 glucitol (sorbitol)-6-phosphate dehydrogenaseSubName: Full=Glucitol (Sorbitol)-6-phosphate dehydrogenase; chromosome CDS2796045 780 + 0.530769
tesB S0403 acyl-CoA thioesterase IISubName: Full=Acyl-CoA thioesterase II; chromosome CDS409195 861 - 0.524971
ucpA S2627 putative oxidoreductaseSubName: Full=Putative oxidoreductase; chromosome CDS2519269 792 - 0.54798
wecF S3892 TDP-Fuc4NAc:lipidII transferaseRecName: Full=Putative ECA polymerase; chromosome CDS3784776 1353 - 0.518847
yaeM S0166 putative ATP-binding component of a transport systemRecName: Full=1-deoxy-D-xylulose 5-phosphate reductoisomerase; Short=DXP reductoisomerase; EC=1.1.1.267; AltName: Full=1-deoxyxylulose-5-phosphate reductoisomerase; AltName: Full=2-C-methyl-D-erythritol 4-phosphate synthase; chromosome CDS183952 1197 + 0.524645
yaeS S0167 hypothetical proteinRecName: Full=Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific); EC=2.5.1.31; AltName: Full=Ditrans,polycis-undecaprenylcistransferase; AltName: Full=Undecaprenyl diphosphate synthase; Short=UDS; AltName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP synthase; chromosome CDS185334 762 + 0.493438
yafH S0292 putative acyl-CoA dehydrogenaseSubName: Full=Putative acyl-CoA dehydrogenase; chromosome CDS291574 2481 - 0.559049
ybaC S0428 putative lipaseRecName: Full=Acetyl esterase; EC=3.1.1.-; chromosome CDS435377 819 - 0.507937
ybbO S0445 putative oxidoreductaseSubName: Full=Putative oxidoreductase; chromosome CDS454461 810 - 0.537037
ybcQ S0726 putative Q proteinSubName: Full=Putative Q protein; chromosome CDS717738 381 + 0.485564
ybdU S0538 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS549283 489 - 0.595092
ybhO S0780 putative synthetaseRecName: Full=Cardiolipin synthase B; Short=CL synthase; EC=2.7.8.-; chromosome CDS761482 1242 - 0.544283
ybjG S0837 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS824371 597 - 0.519263
ychB S1295 hypothetical proteinRecName: Full=4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Short=CMK; EC=2.7.1.148; AltName: Full=4-(cytidine-5-diphospho)-2-C-methyl-D-erythritol kinase; chromosome CDS1258622 852 - 0.532864
yciA S1342 hypothetical proteinRecName: Full=Acyl-CoA thioester hydrolase YciA; EC=3.1.2.-; chromosome CDS1308036 399 - 0.483709
yciK S1358 putative oxidoreductaseSubName: Full=Putative oxidoreductase; chromosome CDS1322505 759 - 0.524374
ydgB S1759 putative oxidoreductaseRecName: Full=Dihydrofolate reductase FolM; Short=DHFR; EC=1.5.1.3; chromosome CDS1695251 723 + 0.50899
ydiD S1647 putative ligase/synthetaseSubName: Full=Putative ligase/synthetase; chromosome CDS1600707 1701 - 0.496767
ygbB S2962 hypothetical proteinRecName: Full=2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Short=MECDP-synthase; Short=MECPP-synthase; Short=MECPS; EC=4.6.1.12; chromosome CDS2838142 480 - 0.535417
ygbP S2963 hypothetical proteinRecName: Full=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; EC=2.7.7.60; AltName: Full=4-diphosphocytidyl-2C-methyl-D-erythritol synthase; AltName: Full=MEP cytidylyltransferase; Short=MCT; chromosome CDS2838621 711 - 0.551336
ygfF S3087 putative oxidoreductaseSubName: Full=Putative oxidoreductase; chromosome CDS2971161 744 - 0.549731
ygfG S3104 putative enzymeSubName: Full=Putative enzyme; chromosome CDS2990301 828 + 0.481884
yghA S3251 putative oxidoreductaseSubName: Full=Putative oxidoreductase; chromosome CDS3133766 885 + 0.545763
yhaE S3377 putative dehydrogenaseSubName: Full=Putative dehydrogenase; chromosome CDS3254479 900 - 0.526667
yhbT S3415 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3284075 525 - 0.51619
yihG S3814 putative endonucleaseSubName: Full=Putative endonuclease; chromosome CDS3713930 933 + 0.454448
yihU S3792 putative dehydrogenaseRecName: Full=3-sulfolactaldehyde reductase; Short=SLA reductase; EC=1.1.1.-; chromosome CDS3687003 897 + 0.552954
yjgI S4503 putative oxidoreductaseSubName: Full=Putative oxidoreductase; chromosome CDS4405258 714 + 0.539216
ymdC S1116 putative synthaseSubName: Full=Putative synthase; chromosome CDS1086491 1482 + 0.505398
yqeF S3052 putative acyltransferaseSubName: Full=Putative acyltransferase; chromosome CDS2939453 1182 - 0.536379