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2024-05-04 05:26:38

Gene list

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COG category: Lipid transport and metabolism
Organism: Shigella flexneri 2a str. 2457T, 2457T

Number of genes found: 89

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Shigella flexneri 2a str. 2457T, 2457T
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA S1464 probable enzymechromosome CDS1428444 606 + 0.458746
NA S2274 hypothetical proteinchromosome CDS2157738 900 + 0.494444
NA S4547 hypothetical proteinchromosome CDS4452843 792 + 0.540404
NA S2554 putative enzymechromosome CDS2445435 2145 - 0.52028
NA S1732 hypothetical proteinchromosome CDS1670434 369 - 0.536585
NA S1582 putative cytochrome oxidasechromosome CDS1541059 621 + 0.536232
NA S2856 hypothetical proteinchromosome CDS2747461 438 - 0.488584
NA S2390 hypothetical proteinchromosome CDS2271510 714 + 0.438375
NA S3074 putative enzymechromosome CDS2959070 549 + 0.513661
NA S3224 hypothetical proteinchromosome CDS3110011 249 + 0.405622
NA S4804 hypothetical proteinchromosome CDS327572 1173 + 0.339301
NA S2555 putative acyltransferasechromosome CDS2447579 1311 - 0.555301
NA S3222 hypothetical proteinchromosome CDS3107379 1689 + 0.529307
aas S3044 2-acyl-glycerophospho-ethanolamine acyltransferase; acyl-acyl-carrier protein synthetasechromosome CDS2928896 2160 - 0.525
accA S0178 acetyl CoA carboxylase, carboxytransferase component, alpha subunitchromosome CDS199052 960 + 0.527083
accB S3510 acetyl CoA carboxylase, carrier of biotin, BCCP subunitchromosome CDS3383090 471 + 0.518047
accC S3511 acetyl CoA carboxylase, biotin carboxylase subunitchromosome CDS3383571 1350 + 0.534074
accD S2527 acetyl CoA carboxylase, carboxytransferase component, beta subunitchromosome CDS2420581 915 - 0.551913
acpD S1471 acyl carrier protein phosphodiesterasechromosome CDS1434338 606 - 0.516502
acpP S1178 acyl carrier proteinchromosome CDS1142224 237 + 0.481013
acpS S2798 CoA:apo-[acyl-carrier-protein]pantetheinephospho transferasechromosome CDS2691277 381 - 0.503937
caiA S0038 probable carnitine operon oxidoreductasechromosome CDS38160 1143 - 0.538933
caiC S0036 probable crotonobetaine/carnitine-CoA ligasechromosome CDS35187 1569 - 0.50733
caiD S0035 carnitine racemasechromosome CDS34293 894 - 0.52349
cdh S3751 CDP-diacylglycerol phosphotidylhydrolasechromosome CDS3647551 756 - 0.486772
cdsA S0168 CDP-diglyceride synthetasechromosome CDS186216 750 + 0.501333
cls S1336 cardiolipin synthasechromosome CDS1302133 1461 - 0.516085
csgE S1106 Curli production assembly/transport component CsgE precursorchromosome CDS1081204 390 - 0.428205
dxs S0365 1-deoxyxylulose-5-phosphate synthase; flavoproteinchromosome CDS366822 1863 - 0.538916
entA S0516 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenasechromosome CDS527806 747 + 0.575636
fabA S1020 beta-hydroxydecanoyl thioester dehydrase, trans-2-decenoyl-ACP isomerasechromosome CDS1006984 519 - 0.522158
fabB S2534 3-oxoacyl-[acyl-carrier-protein] synthase Ichromosome CDS2427944 1242 - 0.561192
fabD S1176 malonyl-CoA-[acyl-carrier-protein] transacylasechromosome CDS1140337 930 + 0.550538
fabF S1179 3-oxoacyl-[acyl-carrier-protein] synthase IIchromosome CDS1142547 1242 + 0.533011
fabG S1177 3-oxoacyl-[acyl-carrier-protein] reductasechromosome CDS1141279 735 + 0.514286
fabH S1175 3-oxoacyl-[acyl-carrier-protein] synthase III; acetyl CoA ACP transacylasechromosome CDS1139368 954 + 0.544025
fabI S1375 enoyl-[acyl-carrier-protein] reductase (NADH)chromosome CDS1344389 789 - 0.532319
fabZ S0173 (3R)-hydroxymyristol acyl carrier protein dehydratasechromosome CDS192532 456 + 0.504386
fadA S3831 thiolase I, 3-ketoacyl-CoA thiolase, acetyl-CoA transferasechromosome CDS3731589 1164 + 0.582474
fadB S3830 4-enzyme protein, 3-hydroxyacyl-CoA dehydrogenase; 3-hydroxybutyryl-CoA epimerase; delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase; enoyl-CoA hydrataschromosome CDS3729390 2190 + 0.551142
fadD S1538 acyl-CoA synthetase, long-chain-fatty-acid--CoA ligasechromosome CDS1497407 1752 + 0.511986
fadL S2557 transport of long-chain fatty acidschromosome CDS2449725 1341 + 0.499627
gcpE S2733 hypothetical proteinchromosome CDS2623719 1128 - 0.531915
hcaB S2760 2,3-dihydroxy-2,3-dihydrophenylpropionatedehydro genasechromosome CDS2649665 813 + 0.560886
kduD S3050 2-deoxy-D-gluconate 3-dehydrogenasechromosome CDS2937539 762 - 0.519685
lytB S0028 LytB proteinchromosome CDS25193 951 + 0.550999
menE S2473 O-succinylbenzoate-CoA ligasechromosome CDS2365835 1356 - 0.561947
pgpA S0363 phosphatidylglycerophosphatasechromosome CDS365221 519 + 0.527938
pgpB S1365 non-essential phosphatidylglycerophosphate phosphatasechromosome CDS1333481 765 + 0.500654
pgsA S2051 phosphatidylglycerophosphate synthetase, CDP-1,2-diacyl-sn-glycero-3-phosphate phosphatidyl transferasechromosome CDS1965207 549 - 0.52459
pldB S3852 lysophospholipase L(2)chromosome CDS3749977 1023 - 0.536657
plsB S3567 glycerol-3-phosphate acyltransferasechromosome CDS3435891 2484 - 0.548309
plsC S3266 1-acyl-sn-glycerol-3-phosphate acyltransferasechromosome CDS3146848 738 - 0.49458
plsX S1174 PlsX proteinchromosome CDS1138260 1041 + 0.519693
psd S4582 phosphatidylserine decarboxylasechromosome CDS4486138 969 - 0.530444
pssA S2820 phosphatidylserine synthasechromosome CDS2713212 1356 + 0.490413
sbm S3102 methylmalonyl-CoA mutase (MCM)chromosome CDS2987200 2145 + 0.547319
sbmA S0258 possible envelope proteinchromosome CDS261827 1221 - 0.510238
sorD S3637 putative sorbitol-6-phosphate 2-dehydrogenasechromosome CDS3519483 807 + 0.509294
srlD S2919 glucitol (sorbitol)-6-phosphate dehydrogenasechromosome CDS2796045 780 + 0.530769
tesB S0403 acyl-CoA thioesterase IIchromosome CDS409195 861 - 0.524971
ucpA S2627 putative oxidoreductasechromosome CDS2519269 792 - 0.54798
wecF S3892 TDP-Fuc4NAc:lipidII transferasechromosome CDS3784776 1353 - 0.518847
yaeM S0166 putative ATP-binding component of a transport systemchromosome CDS183952 1197 + 0.524645
yaeS S0167 hypothetical proteinchromosome CDS185334 762 + 0.493438
yafH S0292 putative acyl-CoA dehydrogenasechromosome CDS291574 2481 - 0.559049
ybaC S0428 putative lipasechromosome CDS435377 819 - 0.507937
ybbO S0445 putative oxidoreductasechromosome CDS454461 810 - 0.537037
ybcQ S0726 putative Q proteinchromosome CDS717738 381 + 0.485564
ybdU S0538 hypothetical proteinchromosome CDS549283 489 - 0.595092
ybhO S0780 putative synthetasechromosome CDS761482 1242 - 0.544283
ybjG S0837 hypothetical proteinchromosome CDS824371 597 - 0.519263
ychB S1295 hypothetical proteinchromosome CDS1258622 852 - 0.532864
yciA S1342 hypothetical proteinchromosome CDS1308036 399 - 0.483709
yciK S1358 putative oxidoreductasechromosome CDS1322505 759 - 0.524374
ydgB S1759 putative oxidoreductasechromosome CDS1695251 723 + 0.50899
ydiD S1647 putative ligase/synthetasechromosome CDS1600707 1701 - 0.496767
ygbB S2962 hypothetical proteinchromosome CDS2838142 480 - 0.535417
ygbP S2963 hypothetical proteinchromosome CDS2838621 711 - 0.551336
ygfF S3087 putative oxidoreductasechromosome CDS2971161 744 - 0.549731
ygfG S3104 putative enzymechromosome CDS2990301 828 + 0.481884
yghA S3251 putative oxidoreductasechromosome CDS3133766 885 + 0.545763
yhaE S3377 putative dehydrogenasechromosome CDS3254479 900 - 0.526667
yhbT S3415 hypothetical proteinchromosome CDS3284075 525 - 0.51619
yihG S3814 putative endonucleasechromosome CDS3713930 933 + 0.454448
yihU S3792 putative dehydrogenasechromosome CDS3687003 897 + 0.552954
yjgI S4503 putative oxidoreductasechromosome CDS4405258 714 + 0.539216
ymdC S1116 putative synthasechromosome CDS1086491 1482 + 0.505398
yqeF S3052 putative acyltransferasechromosome CDS2939453 1182 - 0.536379