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2024-05-19 06:40:52

Gene list

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COG category: Lipid transport and metabolism
Organism: Yersinia pestis KIM, KIM

Number of genes found: 89

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Yersinia pestis KIM, KIM
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA endonuclease homologSubName: Full=Endonuclease homolog; pCD1 CDS58681 249 + 0.493976
aas 2-acyl-glycerophospho-ethanolamineacyltransferas eRecName: Full=Bifunctional protein Aas; Includes: RecName: Full=2-acylglycerophosphoethanolamine acyltransferase; EC=2.3.1.40; AltName: Full=2-acyl-GPE acyltransferase; AltName: Full=Acyl-[acyl-carrier-protein]--phospholipid O-acyltransferase; Includes: RecName: Full=Acyl-[acyl-carrier-protein] synthetase; EC=6.2.1.20; AltName: Full=Acyl-ACP synthetase; AltName: Full=Long-chain-fatty-acid--[acyl-carrier-protein] ligase; chromosome CDS3499188 2178 - 0.508264
accA acetyl CoA carboxylase, carboxytransferase component, alpha subunitRecName: Full=Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Short=ACCase subunit alpha; Short=Acetyl-CoA carboxylase carboxyltransferase subunit alpha; EC=6.4.1.2; chromosome CDS3429475 960 - 0.48125
accB acetyl CoA carboxylase, BCCP subunitSubName: Full=Acetyl CoA carboxylase, BCCP subunit; chromosome CDS222396 510 + 0.488235
accC acetyl CoA carboxylase, biotin carboxylase subunitSubName: Full=Acetyl CoA carboxylase, biotin carboxylase subunit; SubName: Full=Biotin carboxylase; EC=6.3.4.14; chromosome CDS222917 1350 + 0.493333
accD acetyl CoA carboxylase, carboxytransferase component, beta subunitRecName: Full=Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; Short=ACCase subunit beta; Short=Acetyl-CoA carboxylase carboxyltransferase subunit beta; EC=6.4.1.2; chromosome CDS1769766 1071 + 0.493931
acpD acyl carrier protein phosphodiesteraseRecName: Full=FMN-dependent NADH-azoreductase; EC=1.7.-.-; AltName: Full=Azo-dye reductase; AltName: Full=FMN-dependent NADH-azo compound oxidoreductase; chromosome CDS2213387 606 - 0.491749
acpP acyl carrier proteinRecName: Full=Acyl carrier protein; Short=ACP; chromosome CDS1941388 237 + 0.434599
acpS CoA:apo-[acyl-carrier-protein]pantetheinephospho transferaseRecName: Full=Holo-[acyl-carrier-protein] synthase; Short=Holo-ACP synthase; EC=2.7.8.7; AltName: Full=4-phosphopantetheinyl transferase AcpS; chromosome CDS1444714 381 + 0.511811
acs acetyl CoA synthetaseRecName: Full=Acetyl-coenzyme A synthetase; Short=AcCoA synthetase; Short=Acs; EC=6.2.1.1; AltName: Full=Acetate--CoA ligase; AltName: Full=Acyl-activating enzyme; chromosome CDS577565 1965 - 0.477354
aidB putative acyl coenzyme A dehydrogenaseSubName: Full=Putative acyl coenzyme A dehydrogenase; chromosome CDS724078 1674 + 0.529869
cdh CDP-diacylglycerol phosphotidylhydrolaseRecName: Full=CDP-diacylglycerol pyrophosphatase; EC=3.6.1.26; AltName: Full=CDP-diacylglycerol phosphatidylhydrolase; AltName: Full=CDP-diglyceride hydrolase; chromosome CDS4277788 798 - 0.497494
cdsA CDP-diglyceride synthetaseRecName: Full=Phosphatidate cytidylyltransferase; EC=2.7.7.41; chromosome CDS3442842 849 - 0.479388
cls cardiolipin synthaseRecName: Full=Cardiolipin synthase A; Short=CL synthase; EC=2.7.8.-; chromosome CDS2240946 1482 - 0.465587
dxs 1-deoxyxylulose-5-phosphate synthaseRecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; EC=2.2.1.7; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS; chromosome CDS1136081 1860 - 0.489247
fabA beta-hydroxydecanoyl thioester dehydraseRecName: Full=3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase; EC=4.2.1.59; AltName: Full=3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA; AltName: Full=Beta-hydroxydecanoyl thioester dehydrase; AltName: Full=Trans-2-decenoyl-[acyl-carrier-protein] isomerase; EC=5.3.3.14; chromosome CDS3023697 627 + 0.476874
fabB 3-oxoacyl-[acyl-carrier-protein] synthase ISubName: Full=3-oxoacyl-[acyl-carrier-protein] synthase I; EC=2.3.1.41; chromosome CDS1758401 1224 + 0.495098
fabD malonyl-CoA-[acyl-carrier-protein] transacylaseRecName: Full=Malonyl CoA-acyl carrier protein transacylase; EC=2.3.1.39; chromosome CDS1939557 930 + 0.515054
fabF 3-oxoacyl-[acyl-carrier-protein] synthase IIRecName: Full=3-oxoacyl-[acyl-carrier-protein] synthase 2; EC=2.3.1.179; chromosome CDS1941719 1242 + 0.492754
fabF putative beta-ketoacyl-acp synthaseSubName: Full=Putative beta-ketoacyl-[acyl-carrier-protein] synthase; SubName: Full=Putative beta-ketoacyl-acp synthase; chromosome CDS2998231 1284 - 0.433022
fabF 3-oxoacyl-[acyl-carrier-protein] synthase IISubName: Full=3-oxoacyl-[acyl-carrier-protein] synthase II; chromosome CDS3027228 1029 + 0.525753
fabG 3-oxoacyl-[acyl-carrier-protein] reductaseSubName: Full=3-oxoacyl-[acyl-carrier-protein] reductase; SubName: Full=Putative short chain oxidoreductase; chromosome CDS3201746 816 + 0.58701
fabG 3-oxoacyl-[acyl-carrier-protein] reductaseSubName: Full=3-oxoacyl-[acyl-carrier protein] reductase; EC=1.1.1.100; SubName: Full=3-oxoacyl-[acyl-carrier-protein] reductase; chromosome CDS1940500 735 + 0.482993
fabG putative 3-ketoacyl-acyl carrier protein reductaseSubName: Full=Putative 3-ketoacyl-acyl carrier protein reductase; SubName: Full=Putative beta-ketoacyl-[acyl-carrier-protein] reductase; chromosome CDS2997492 792 - 0.433081
fabG 2,5-dichloro-2,5-cyclohexadiene-1,4-dioldehydrog enaseSubName: Full=2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase; SubName: Full=Putative short chain dehydrogenase; chromosome CDS3001241 747 + 0.420348
fabH 3-oxoacyl-[acyl-carrier-protein] synthase IIIRecName: Full=3-oxoacyl-[acyl-carrier-protein] synthase 3; EC=2.3.1.180; AltName: Full=3-oxoacyl-[acyl-carrier-protein] synthase III; AltName: Full=Beta-ketoacyl-ACP synthase III; Short=KAS III; chromosome CDS1938569 951 + 0.507886
fabZ (3R)-hydroxymyristol acyl carrier protein dehydrataseRecName: Full=3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ; EC=4.2.1.59; AltName: Full=(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; Short=(3R)-hydroxymyristoyl-ACP dehydrase; AltName: Full=Beta-hydroxyacyl-ACP dehydratase; chromosome CDS3436665 531 - 0.474576
fabZ putative myristoyl-acyl carrier dehydrataseSubName: Full=Putative myristoyl-acyl carrier dehydratase; chromosome CDS2999504 525 - 0.367619
fadA thiolase IRecName: Full=3-ketoacyl-CoA thiolase; EC=2.3.1.16; AltName: Full=Acetyl-CoA acyltransferase; AltName: Full=Beta-ketothiolase; AltName: Full=Fatty acid oxidation complex subunit beta; chromosome CDS513528 1164 - 0.493986
fadB 4-enzyme protein: 3-hydroxyacyl-CoA dehydrogenase; 3-hydroxybutyryl-CoA epimerase; delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase; enoyl-CoA hydratasRecName: Full=Fatty acid oxidation complex subunit alpha; Includes: RecName: Full=Enoyl-CoA hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA isomerase/3-hydroxybutyryl-CoA epimerase; EC=4.2.1.17; EC=5.1.2.3; EC=5.3.3.8; Includes: RecName: Full=3-hydroxyacyl-CoA dehydrogenase; EC=1.1.1.35; chromosome CDS514703 2190 - 0.476712
fadD acyl-CoA synthetaseRecName: Full=Long-chain-fatty-acid--CoA ligase; EC=6.2.1.3; AltName: Full=Long-chain acyl-CoA synthetase; chromosome CDS2463303 1740 - 0.481609
fadL long-chain fatty acid transport proteinSubName: Full=Long-chain fatty acid transport protein; chromosome CDS1743089 1272 - 0.485849
gcpE hypothetical proteinRecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; EC=1.17.7.1; AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; chromosome CDS1504033 1128 + 0.455674
kduD 2-deoxy-D-gluconate 3-dehydrogenaseSubName: Full=2-deoxy-D-gluconate 3-dehydrogenase; EC=1.1.1.125; chromosome CDS3548806 756 + 0.533069
kduD 2-deoxy-D-gluconate 3-dehydrogenaseSubName: Full=2-deoxy-D-gluconate 3-dehydrogenase; chromosome CDS2085066 807 - 0.486989
lytB penicillin tolerance proteinRecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase; EC=1.17.1.2; chromosome CDS4109083 978 - 0.488753
menE o-succinylbenzoate-CoA ligaseSubName: Full=O-succinylbenzoate-CoA ligase; chromosome CDS1838811 1467 + 0.579414
pgpA phosphatidylglycerophosphataseRecName: Full=Phosphatidylglycerophosphatase A; EC=3.1.3.27; AltName: Full=Phosphatidylglycerolphosphate phosphatase A; chromosome CDS1132759 513 + 0.477583
pgpB membrane bound non-essential phosphatidylglycerophosphate phosphataseSubName: Full=Membrane bound non-essential phosphatidylglycerophosphate phosphatase; SubName: Full=Phosphatidylglycerophosphatase B; EC=3.1.3.27; chromosome CDS2276759 762 + 0.494751
pgsA phosphatidylglycerophosphate synthetaseRecName: Full=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; EC=2.7.8.5; AltName: Full=Phosphatidylglycerophosphate synthase; Short=PGP synthase; chromosome CDS2701942 549 - 0.460838
pksG putative hydroxymethylglutaryl-coenzyme A synthaseSubName: Full=Putative hydroxymethylglutaryl-coenzyme A synthase; chromosome CDS2996238 1239 - 0.443099
pldB lysophospholipase L(2)SubName: Full=Lysophospholipase L(2); SubName: Full=Putative lysophospholipase; EC=3.1.1.5; chromosome CDS446689 1014 + 0.516765
plsB glycerol-3-phosphate acyltransferaseRecName: Full=Glycerol-3-phosphate acyltransferase; Short=GPAT; EC=2.3.1.15; chromosome CDS644547 2607 - 0.495972
plsC 1-acyl-sn-glycerol-3-phosphate acyltransferaseSubName: Full=1-acyl-sn-glycerol-3-phosphate acyltransferase; chromosome CDS3888447 732 - 0.474044
plsX fatty acid/phospholipid synthesis proteinRecName: Full=Phosphate acyltransferase; EC=2.3.1.n2; AltName: Full=Acyl-ACP phosphotransacylase; AltName: Full=Acyl-[acyl-carrier-protein]--phosphate acyltransferase; AltName: Full=Phosphate-acyl-ACP acyltransferase; chromosome CDS1937528 1035 + 0.522705
psd phosphatidylserine decarboxylaseRecName: Full=Phosphatidylserine decarboxylase proenzyme; EC=4.1.1.65; Contains: RecName: Full=Phosphatidylserine decarboxylase alpha chain; Contains: RecName: Full=Phosphatidylserine decarboxylase beta chain; chromosome CDS701311 882 - 0.503401
pssA phosphatidylserine synthaseSubName: Full=CDP-diacylglycerol--serine O-phosphatidyltransferase; SubName: Full=Phosphatidylserine synthase; chromosome CDS1030377 1359 - 0.465784
tesB acyl-CoA thioesterase IISubName: Full=Acyl-CoA thioesterase II; chromosome CDS1176759 888 - 0.489865
tox murine toxinSubName: Full=Toxin; pMT1 CDS83997 1599 - 0.380238
ucpA putative oxidoreductaseSubName: Full=Putative oxidoreductase; chromosome CDS2863500 741 - 0.535762
y0219 putative oxidoreductaseSubName: Full=Putative 2-hydroxy-3-oxopropionate reductase; EC=1.1.1.60; SubName: Full=Putative oxidoreductase; chromosome CDS234281 891 - 0.50954
y0707 hypothetical proteinSubName: Full=Putative lipid carrier protein; SubName: Full=Uncharacterized protein; chromosome CDS794191 603 + 0.504146
y0828 hypothetical proteinRecName: Full=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; EC=2.7.7.60; AltName: Full=4-diphosphocytidyl-2C-methyl-D-erythritol synthase; AltName: Full=MEP cytidylyltransferase; Short=MCT; chromosome CDS928395 726 + 0.506887
y0829 hypothetical proteinRecName: Full=2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Short=MECDP-synthase; Short=MECPP-synthase; Short=MECPS; EC=4.6.1.12; chromosome CDS929250 498 + 0.477912
y0839 putative dehydrogenaseSubName: Full=Putative dehydrogenase; chromosome CDS940153 771 + 0.499352
y0946 putative acyl-CoA dehydrogenaseRecName: Full=Acyl-coenzyme A dehydrogenase; Short=ACDH; EC=1.3.99.-; chromosome CDS1066622 2448 - 0.515114
y0971 hypotheticalSubName: Full=Putative methyltransferase; SubName: Full=Uncharacterized protein; chromosome CDS1097033 588 + 0.42517
y0984 putative dehydrogenaseSubName: Full=Probable short-chain dehydrogenase; SubName: Full=Putative dehydrogenase; chromosome CDS1116142 681 + 0.503671
y1098 putative oxidoreductaseSubName: Full=Probable short-chain dehydrogenase; EC=1.-.-.-; SubName: Full=Putative oxidoreductase; chromosome CDS1237517 777 - 0.526384
y1115 probable enzymeSubName: Full=Probable enzyme; SubName: Full=Putative CDP-alcohol phosphatidyltransferase; chromosome CDS1252451 603 + 0.512438
y1117 hypotheticalSubName: Full=Putative acyltransferase; SubName: Full=Uncharacterized protein; chromosome CDS1253985 633 + 0.491311
y1119 putative enzymeSubName: Full=Putative dual specificity phosphatase; SubName: Full=Putative enzyme; chromosome CDS1256370 1320 + 0.527273
y1378 hypothetical proteinRecName: Full=Probable lipid kinase YegS-like; EC=2.7.1.-; chromosome CDS1525881 891 - 0.520763
y1579 putative acyltransferaseRecName: Full=3-ketoacyl-CoA thiolase; EC=2.3.1.16; AltName: Full=ACSs; AltName: Full=Acetyl-CoA acyltransferase; AltName: Full=Acyl-CoA ligase; AltName: Full=Beta-ketothiolase; AltName: Full=Fatty acid oxidation complex subunit beta; chromosome CDS1745351 1311 + 0.531655
y1580 putative enzymeRecName: Full=Fatty acid oxidation complex subunit alpha; Includes: RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA epimerase; EC=4.2.1.17; EC=5.1.2.3; Includes: RecName: Full=3-hydroxyacyl-CoA dehydrogenase; EC=1.1.1.35; chromosome CDS1746658 2328 + 0.502148
y1645 putative oxidoreductaseSubName: Full=Putative oxidoreductase; chromosome CDS1819141 726 + 0.451791
y1996 hypotheticalSubName: Full=Putative exported protein; SubName: Full=Uncharacterized protein; chromosome CDS2197204 936 - 0.415598
y2039 hypothetical proteinSubName: Full=Putative acyl-CoA thioester hydrolase; EC=3.1.2.-; SubName: Full=Uncharacterized protein; chromosome CDS2247807 450 - 0.475556
y2056 putative oxidoreductaseSubName: Full=Putative oxidoreductase; SubName: Full=Putative short chain dehydrogenase; chromosome CDS2264516 849 - 0.508834
y2293 hypothetical proteinRecName: Full=4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Short=CMK; EC=2.7.1.148; AltName: Full=4-(cytidine-5-diphospho)-2-C-methyl-D-erythritol kinase; chromosome CDS2529842 900 + 0.492222
y2301 hypotheticalSubName: Full=Putative esterase; SubName: Full=Uncharacterized protein; chromosome CDS2536302 831 - 0.521059
y2317 putative oxidoreductaseSubName: Full=Putative dehydrogenase; SubName: Full=Putative oxidoreductase; chromosome CDS2550900 681 + 0.403818
y2334 hypotheticalSubName: Full=Uncharacterized protein; chromosome CDS2569240 540 - 0.52037
y2335 hypotheticalSubName: Full=102 kbases unstable region: from 1 to 119443; SubName: Full=Uncharacterized protein; chromosome CDS2569739 510 - 0.498039
y2384 putative transcriptional regulatorSubName: Full=Putative transcriptional regulator; chromosome CDS2631333 651 + 0.511521
y2497 putative oxidoreductaseSubName: Full=Putative oxidoreductase; chromosome CDS2758268 2067 - 0.520561
y2707 putative acyl transferaseRecName: Full=Malonyl CoA-acyl carrier protein transacylase; EC=2.3.1.39; chromosome CDS2992221 849 - 0.402827
y2709 putative 3-oxoacyl-acyl carrier protein reductaseSubName: Full=Putative 3-oxoacyl-acyl carrier protein reductase; SubName: Full=Putative short chain dehydrogenase; chromosome CDS2993981 789 - 0.395437
y2710 putative polyketide biosynthesis enoyl-coa hydrataseSubName: Full=Putative polyketide biosynthesis enoyl-coa hydratase; chromosome CDS2994772 777 - 0.395109
y2711 putative enoyl-coa hydratase proteinSubName: Full=Putative enoyl-CoA hydratase; SubName: Full=Putative enoyl-coa hydratase protein; chromosome CDS2995526 771 - 0.400778
y2741 hypotheticalSubName: Full=Uncharacterized protein; chromosome CDS3024987 411 + 0.491484
y2859 hypothetical proteinSubName: Full=Membrane-associated phospholipid phosphatase; SubName: Full=Uncharacterized protein; chromosome CDS3156871 606 + 0.470297
y2907 hypothetical proteinSubName: Full=Putative membrane protein; SubName: Full=Uncharacterized protein; chromosome CDS3211306 702 + 0.458689
y3078 hypothetical proteinSubName: Full=Oligoketide cyclase/lipid transport protein; SubName: Full=Uncharacterized protein; chromosome CDS3387749 537 - 0.424581
y3130 hypothetical proteinRecName: Full=Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific); EC=2.5.1.31; AltName: Full=Ditrans,polycis-undecaprenylcistransferase; AltName: Full=Undecaprenyl diphosphate synthase; Short=UDS; AltName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP synthase; chromosome CDS3443700 759 - 0.449275
y3131 putative ATP-binding component of a transport systemRecName: Full=1-deoxy-D-xylulose 5-phosphate reductoisomerase; Short=DXP reductoisomerase; EC=1.1.1.267; AltName: Full=1-deoxyxylulose-5-phosphate reductoisomerase; AltName: Full=2-C-methyl-D-erythritol 4-phosphate synthase; chromosome CDS3444682 1197 - 0.462824
y3641 putative fatty acid biosynthesis proteinSubName: Full=Putative AMP-binding enzyme-family protein; SubName: Full=Putative fatty acid biosynthesis protein; chromosome CDS4036982 1806 - 0.485604
y4035 hypotheticalSubName: Full=Putative membrane protein; SubName: Full=Uncharacterized protein; chromosome CDS4472503 1464 - 0.477459
y4042 hypotheticalSubName: Full=Biotin carboxylase; SubName: Full=Uncharacterized protein; chromosome CDS4482693 1275 + 0.454118