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2024-05-17 15:47:55

Gene list

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COG category: Lipid transport and metabolism
Organism: Salmonella typhimurium LT2, LT2; SGSC 1412; ATCC 700720

Number of genes found: 98

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Salmonella typhimurium LT2, LT2; SGSC 1412; ATCC 700720
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
STM0857 putative acyl-CoA dehydrogenaseSubName: Full=Putative acyl-CoA dehydrogenase; chromosome CDS928720 1164 + 0.431271
STM1623 putative carboxylesteraseSubName: Full=Putative carboxylesterase; chromosome CDS1711702 1509 - 0.571902
STM1675 putative short-chain alcohol dehydrogenaseSubName: Full=Putative short-chain alcohol dehydrogenase; chromosome CDS1768000 714 + 0.57423
STM2011 putative cytoplasmic proteinSubName: Full=Putative cytoplasmic protein; chromosome CDS2092957 327 - 0.409786
STM3119 putative monoamine oxidaseSubName: Full=Putative monoamine oxidase; chromosome CDS3278175 528 - 0.5
STM3595 putative phosphataseSubName: Full=Putative phosphatase; chromosome CDS3766164 1272 - 0.551887
STM4032 putative acetyl esteraseSubName: Full=Putative acetyl esterase; chromosome CDS4240489 930 - 0.558065
aas 2-acylglycerophospho-ethanolamine acyl transferaseRecName: Full=Bifunctional protein Aas; Includes: RecName: Full=2-acylglycerophosphoethanolamine acyltransferase; EC=2.3.1.40; AltName: Full=2-acyl-GPE acyltransferase; AltName: Full=Acyl-[acyl-carrier-protein]--phospholipid O-acyltransferase; Includes: RecName: Full=Acyl-[acyl-carrier-protein] synthetase; EC=6.2.1.20; AltName: Full=Acyl-ACP synthetase; AltName: Full=Long-chain-fatty-acid--[acyl-carrier-protein] ligase; chromosome CDS3167872 2160 - 0.550463
accA acetylCoA carboxylase, carboxytransferase component, alpha subunitRecName: Full=Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Short=ACCase subunit alpha; Short=Acetyl-CoA carboxylase carboxyltransferase subunit alpha; EC=6.4.1.2; chromosome CDS273043 960 + 0.547917
accB acetylCoA carboxylase, BCCP subunitSubName: Full=AcetylCoA carboxylase, BCCP subunit; EC=6.4.1.2; chromosome CDS3550095 471 + 0.526539
accC acetyl CoA carboxylaseSubName: Full=Acetyl CoA carboxylase; EC=6.3.4.14; chromosome CDS3550576 1350 + 0.548148
accD acetylCoA carboxylase, beta subunitRecName: Full=Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; Short=ACCase subunit beta; Short=Acetyl-CoA carboxylase carboxyltransferase subunit beta; EC=6.4.1.2; chromosome CDS2478690 915 - 0.571585
acpD acyl carrier protein phosphodiesteraseRecName: Full=FMN-dependent NADH-azoreductase; EC=1.7.-.-; AltName: Full=Azo-dye reductase; AltName: Full=FMN-dependent NADH-azo compound oxidoreductase; chromosome CDS1735437 606 + 0.536304
acpP acyl carrier proteinRecName: Full=Acyl carrier protein; Short=ACP; AltName: Full=Cytosolic-activating factor; Short=CAF; AltName: Full=Fatty acid synthase acyl carrier protein; chromosome CDS1280113 237 + 0.476793
acpS holo-[acyl-carrier-protein] synthase, subunitRecName: Full=Holo-[acyl-carrier-protein] synthase; Short=Holo-ACP synthase; EC=2.7.8.7; AltName: Full=4-phosphopantetheinyl transferase AcpS; chromosome CDS2722062 381 - 0.566929
acs acetyl-CoA synthetaseRecName: Full=Acetyl-coenzyme A synthetase; Short=AcCoA synthetase; Short=Acs; EC=6.2.1.1; AltName: Full=Acetate--CoA ligase; AltName: Full=Acyl-activating enzyme; chromosome CDS4513714 1959 - 0.567126
aes acetyl esteraseRecName: Full=Acetyl esterase; EC=3.1.1.-; chromosome CDS547873 972 - 0.562757
aidB putative acyl-CoA dehydrogenaseSubName: Full=Putative acyl-CoA dehydrogenase; chromosome CDS4619614 1623 + 0.566851
apeE outer membrane N-acetyl phenylalanine beta-naphthyl ester-cleaving esteraseSubName: Full=Outer membrane N-acetyl phenylalanine beta-naphthyl ester-cleaving esterase; chromosome CDS627193 1971 + 0.557078
caiA putative acyl-CoA dehydrogenase, carnitine metabolismRecName: Full=Crotonobetainyl-CoA dehydrogenase; EC=1.3.99.-; AltName: Full=Crotonobetainyl-CoA reductase; chromosome CDS85509 1143 - 0.525809
caiC crotonobetaine/carnitine-CoA ligaseRecName: Full=Probable crotonobetaine/carnitine-CoA ligase; EC=6.2.1.-; chromosome CDS82564 1554 - 0.507722
caiD carnitine racemaseRecName: Full=Carnitinyl-CoA dehydratase; EC=4.2.1.149; AltName: Full=Crotonobetainyl-CoA hydratase; chromosome CDS81725 786 - 0.568702
cdsA CDP-diglyceride synthaseRecName: Full=Phosphatidate cytidylyltransferase; EC=2.7.7.41; chromosome CDS260126 858 + 0.527972
citX putative cytoplasmic proteinSubName: Full=Putative cytoplasmic protein; chromosome CDS683274 552 - 0.619565
citX2 putative cytoplasmic proteinSubName: Full=Putative cytoplasmic protein; chromosome CDS72400 552 + 0.559783
cls cardiolipin synthaseRecName: Full=Cardiolipin synthase A; Short=CL synthase; EC=2.7.8.-; chromosome CDS1832868 1461 + 0.536619
csgE curli production assembly/transport component, 2nd curli operonRecName: Full=Curli production assembly/transport component CsgE; Flags: Precursor; chromosome CDS1229328 396 - 0.444444
dxr 1-deoxy-D-xylulose 5-phosphate reductoisomeraseRecName: Full=1-deoxy-D-xylulose 5-phosphate reductoisomerase; Short=DXP reductoisomerase; EC=1.1.1.267; AltName: Full=1-deoxyxylulose-5-phosphate reductoisomerase; AltName: Full=2-C-methyl-D-erythritol 4-phosphate synthase; chromosome CDS257846 1197 + 0.558897
dxs 1-deoxyxylulose-5-phosphate synthase; flavoproteinRecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; EC=2.2.1.7; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS; chromosome CDS474630 1863 - 0.555556
entA 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenaseSubName: Full=2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; EC=1.3.1.28; chromosome CDS659921 756 + 0.585979
fabA beta-hydroxydecanoyl thioester dehydraseRecName: Full=3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase; EC=4.2.1.59; AltName: Full=3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA; AltName: Full=Beta-hydroxydecanoyl thioester dehydrase; AltName: Full=Trans-2-decenoyl-[acyl-carrier-protein] isomerase; EC=5.3.3.14; chromosome CDS1157908 519 - 0.535645
fabB 3-oxoacyl-[acyl-carrier-protein] synthase ISubName: Full=3-oxoacyl-[acyl-carrier-protein] synthase I; EC=2.3.1.41; chromosome CDS2488622 1215 - 0.573663
fabD malonyl-CoA-[acyl-carrier-protein] transacylaseRecName: Full=Malonyl CoA-acyl carrier protein transacylase; Short=MCT; EC=2.3.1.39; chromosome CDS1278281 930 + 0.566667
fabF 3-oxoacyl-[acyl-carrier-protein] synthase IIRecName: Full=3-oxoacyl-[acyl-carrier-protein] synthase 2; EC=2.3.1.179; chromosome CDS1280435 1242 + 0.552335
fabG 3-oxoacyl-[acyl-carrier-protein] reductaseRecName: Full=3-oxoacyl-[acyl-carrier-protein] reductase FabG; EC=1.1.1.100; AltName: Full=3-ketoacyl-acyl carrier protein reductase; AltName: Full=Beta-Ketoacyl-acyl carrier protein reductase; AltName: Full=Beta-ketoacyl-ACP reductase; chromosome CDS1279223 735 + 0.503401
fabH 3-oxoacyl-[acyl-carrier-protein] synthase III; acetylCoA ACP transacylaseRecName: Full=3-oxoacyl-[acyl-carrier-protein] synthase 3; EC=2.3.1.180; AltName: Full=3-oxoacyl-[acyl-carrier-protein] synthase III; AltName: Full=Beta-ketoacyl-ACP synthase III; Short=KAS III; chromosome CDS1277312 954 + 0.545073
fabI enoyl-[acyl-carrier-protein] reductase (NADH)RecName: Full=Enoyl-[acyl-carrier-protein] reductase [NADH] FabI; Short=ENR; EC=1.3.1.9; AltName: Full=NADH-dependent enoyl-ACP reductase; chromosome CDS1792136 789 + 0.542459
fabZ (3R)-hydroxymyristol acyl carrier protein dehydrataseRecName: Full=3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ; EC=4.2.1.59; AltName: Full=(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; Short=(3R)-hydroxymyristoyl-ACP dehydrase; AltName: Full=Beta-hydroxyacyl-ACP dehydratase; chromosome CDS266536 456 + 0.524123
fadA 3-ketoacyl-CoA thiolaseRecName: Full=3-ketoacyl-CoA thiolase; EC=2.3.1.16; AltName: Full=Acetyl-CoA acyltransferase; AltName: Full=Beta-ketothiolase; AltName: Full=Fatty acid oxidation complex subunit beta; chromosome CDS4188137 1164 - 0.58677
fadB 3-hydroxyacyl-coA dehydrogenase of 4-enzyme FadB proteinRecName: Full=Fatty acid oxidation complex subunit alpha; Includes: RecName: Full=Enoyl-CoA hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA isomerase/3-hydroxybutyryl-CoA epimerase; EC=4.2.1.17; EC=5.1.2.3; EC=5.3.3.8; Includes: RecName: Full=3-hydroxyacyl-CoA dehydrogenase; EC=1.1.1.35; chromosome CDS4189310 2190 - 0.557078
fadD acyl-CoA synthetaseRecName: Full=Long-chain-fatty-acid--CoA ligase; EC=6.2.1.3; AltName: Full=Long-chain acyl-CoA synthetase; chromosome CDS1915222 1686 - 0.523132
fadL transport of long-chain fatty acidsRecName: Full=Long-chain fatty acid transport protein; AltName: Full=Outer membrane FadL protein; AltName: Full=Outer membrane flp protein; Flags: Precursor; chromosome CDS2502389 1314 + 0.530441
garR tartronate semialdehyde reductase (TSAR)SubName: Full=Tartronate semialdehyde reductase (TSAR); EC=1.1.1.60; chromosome CDS3416453 891 - 0.564534
gcpE putative proteinRecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; EC=1.17.7.1; AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; chromosome CDS2656256 1119 - 0.547811
glxR tartronic semialdehyde reductaseSubName: Full=Tartronic semialdehyde reductase; EC=1.1.1.60; chromosome CDS580138 879 + 0.508532
iacP putative acyl carrier proteinRecName: Full=Probable acyl carrier protein IacP; Short=ACP; chromosome CDS3024412 249 - 0.37751
idi isopentenyldiphosphate isomeraseRecName: Full=Isopentenyl-diphosphate Delta-isomerase; Short=IPP isomerase; EC=5.3.3.2; AltName: Full=IPP:DMAPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase; chromosome CDS3198598 546 + 0.520147
idnO 5-keto-D-gluconate-5-reductaseSubName: Full=5-keto-D-gluconate-5-reductase; chromosome CDS4727174 765 - 0.535948
ipk isopentenyl monophosphate kinaseRecName: Full=4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Short=CMK; EC=2.7.1.148; AltName: Full=4-(cytidine-5-diphospho)-2-C-methyl-D-erythritol kinase; chromosome CDS1876644 852 + 0.544601
ispD 4-phosphocytidyl-2C-methyl-D-erythritol synthaseRecName: Full=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; EC=2.7.7.60; AltName: Full=4-diphosphocytidyl-2C-methyl-D-erythritol synthase; AltName: Full=MEP cytidylyltransferase; Short=MCT; chromosome CDS3070745 711 - 0.575246
ispF 2C-methyl-d-erythritol-2,4-cyclodiphosphatesynth aseRecName: Full=2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Short=MECDP-synthase; Short=MECPP-synthase; Short=MECPS; EC=4.6.1.12; chromosome CDS3070266 480 - 0.572917
kduD 2-deoxy-D-gluconate 3-dehydrogenaseSubName: Full=2-deoxy-D-gluconate 3-dehydrogenase; EC=1.1.1.125; chromosome CDS3177574 762 - 0.518373
lytB regulates the activity of guanosine 3',5'-bispyrophosphate synthetase I (RelA)RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase; EC=1.17.1.2; chromosome CDS57796 951 + 0.574133
mdoC membrane proteinRecName: Full=Glucans biosynthesis protein C; EC=2.1.-.-; chromosome CDS1234992 1155 - 0.464069
menE o-succinylbenzoate-CoA ligaseRecName: Full=2-succinylbenzoate--CoA ligase; EC=6.2.1.26; AltName: Full=o-succinylbenzoyl-CoA synthetase; Short=OSB-CoA synthetase; chromosome CDS2411673 1368 - 0.599415
oafA acetylation of the O-antigen (LPS)SubName: Full=Acetylation of the O-antigen (LPS); chromosome CDS2332130 1830 + 0.384699
pduG propanediol utilization diol dehydratase reactivation proteinSubName: Full=Propanediol utilization diol dehydratase reactivation protein; chromosome CDS2120853 1833 + 0.596836
pgpA phosphatidylglycerophosphatase ARecName: Full=Phosphatidylglycerophosphatase A; EC=3.1.3.27; AltName: Full=Phosphatidylglycerolphosphate phosphatase A; chromosome CDS472980 516 + 0.540698
pgpB phosphatidylglycerophosphate phosphatase BSubName: Full=Phosphatidylglycerophosphate phosphatase B; EC=3.1.3.27; chromosome CDS1803149 765 - 0.564706
pgsA phosphatidylglycerophosphate synthetaseRecName: Full=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; EC=2.7.8.5; AltName: Full=Phosphatidylglycerophosphate synthase; Short=PGP synthase; chromosome CDS2035813 549 - 0.546448
phoN non-specific acid phosphataseRecName: Full=Non-specific acid phosphatase; Short=NSAP; EC=3.1.3.2; Flags: Precursor; chromosome CDS4563589 753 - 0.452855
pldB lysophospholipase L(2)SubName: Full=82% identity to E. coli lysophospholipase (PLDB) (SP:P07000); contains similarity to Pfam family PF00561 (Alpha/beta hydrolase fold), score=116.6, E=4.6e-31, N=1; SubName: Full=Lysophospholipase L(2); EC=3.1.1.5; chromosome CDS4165860 1017 + 0.546706
plsB glycerolphosphate acyltransferase activityRecName: Full=Glycerol-3-phosphate acyltransferase; Short=GPAT; EC=2.3.1.15; chromosome CDS4456181 2421 - 0.546881
plsC 1-acyl-sn-glycerol-3-phosphate acyltransferaseRecName: Full=1-acyl-sn-glycerol-3-phosphate acyltransferase; Short=1-AGP acyltransferase; Short=1-AGPAT; EC=2.3.1.51; AltName: Full=Lysophosphatidic acid acyltransferase; Short=LPAAT; chromosome CDS3335953 738 - 0.5
plsX putative fatty acid/phospholipid synthesis proteinRecName: Full=Phosphate acyltransferase; EC=2.3.1.n2; AltName: Full=Acyl-ACP phosphotransacylase; AltName: Full=Acyl-[acyl-carrier-protein]--phosphate acyltransferase; AltName: Full=Phosphate-acyl-ACP acyltransferase; chromosome CDS1276153 1080 + 0.534259
prpE putative acetyl-CoA synthetase, propionate catabolism operonRecName: Full=Propionate--CoA ligase; EC=6.2.1.17; AltName: Full=Propionyl-CoA synthetase; chromosome CDS421688 1887 + 0.588765
psd phosphatidylserine decarboxylaseRecName: Full=Phosphatidylserine decarboxylase proenzyme; EC=4.1.1.65; Contains: RecName: Full=Phosphatidylserine decarboxylase alpha chain; Contains: RecName: Full=Phosphatidylserine decarboxylase beta chain; chromosome CDS4592578 969 - 0.537668
pssA phosphatidylserine synthaseSubName: Full=Phosphatidylserine synthase; EC=2.7.8.8; chromosome CDS2792655 1356 + 0.498525
sbmA putative ABC superfamily transporterSubName: Full=Putative ABC superfamily transporter; chromosome CDS430359 1221 + 0.515971
srlD glucitol (sorbitol)-6-phosphate dehydrogenaseSubName: Full=Glucitol (Sorbitol)-6-phosphate dehydrogenase; EC=1.1.1.140; chromosome CDS2980225 780 + 0.547436
sseJ Salmonella translocated effectorRecName: Full=Secreted effector protein SseJ; EC=3.-.-.-; AltName: Full=Salmonella-translocated effector J; Short=STE J; chromosome CDS1721293 1227 + 0.392013
tesB acyl-CoA thioesterase IISubName: Full=Acyl-CoA thioesterase II; EC=3.1.2.-; chromosome CDS522280 861 - 0.529617
ucpA putative oxidoreductaseRecName: Full=Oxidoreductase UcpA; EC=1.-.-.-; chromosome CDS2556599 792 - 0.539141
uppS undecaprenyl pyrophosphate synthetase (di-trans, poly-cis-decaprenylcistransferase)RecName: Full=Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific); EC=2.5.1.31; AltName: Full=Ditrans,polycis-undecaprenylcistransferase; AltName: Full=Undecaprenyl diphosphate synthase; Short=UDS; AltName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP synthase; chromosome CDS259355 759 + 0.512516
ushB CDP-diacylglycerol phosphotidylhydrolaseRecName: Full=CDP-diacylglycerol pyrophosphatase; EC=3.6.1.26; AltName: Full=CDP-diacylglycerol phosphatidylhydrolase; AltName: Full=CDP-diglyceride hydrolase; chromosome CDS4274586 756 + 0.542328
wecF TDP-Fuc4NAc:lipidII transferaseRecName: Full=Putative ECA polymerase; chromosome CDS4137118 1359 + 0.523179
yafH putative acyl-CoA dehydrogenaseRecName: Full=Acyl-coenzyme A dehydrogenase; Short=ACDH; EC=1.3.99.-; chromosome CDS352597 2445 - 0.560327
ybbO putative oxidoreductaseSubName: Full=Putative oxidoreductase; EC=1.-.-.-; chromosome CDS564929 771 - 0.549935
ybhO cardiolipin (CL) synthaseRecName: Full=Cardiolipin synthase B; Short=CL synthase; EC=2.7.8.-; chromosome CDS877112 1242 - 0.543478
ybjG putative permeaseSubName: Full=Putative permease; chromosome CDS937574 609 - 0.551724
yciA putative Acyl-CoA hydrolaseRecName: Full=Acyl-CoA thioester hydrolase YciA; EC=3.1.2.-; chromosome CDS1830799 402 + 0.542289
yciK putative oxoacyl-(acyl carrier protein) reductaseSubName: Full=Putative oxoacyl-(Acyl carrier protein) reductase; chromosome CDS1814369 762 + 0.568241
ydiD plant pathogenicity factor-like proteinSubName: Full=Plant pathogenicity factor-like protein; chromosome CDS1430189 1641 - 0.533211
ydiF putative acetyl-CoA:acetoacetyl-CoA transferase beta subunitRecName: Full=Acetate CoA-transferase YdiF; EC=2.8.3.8; chromosome CDS1437868 1554 - 0.493565
ydiO putative acyl-CoA dehydrogenaseSubName: Full=Putative acyl-CoA dehydrogenase; chromosome CDS1436703 1152 - 0.499132
yegS putative diacylglycerol kinase catalytic domain containing proteinRecName: Full=Probable lipid kinase YegS; EC=2.7.1.-; chromosome CDS2234013 900 + 0.548889
yeiU putative permeaseSubName: Full=Putative permease; chromosome CDS2312525 720 + 0.508333
yfcX putative dehydrogenaseRecName: Full=Fatty acid oxidation complex subunit alpha; Includes: RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA epimerase; EC=4.2.1.17; EC=5.1.2.3; Includes: RecName: Full=3-hydroxyacyl-CoA dehydrogenase; EC=1.1.1.35; chromosome CDS2498105 2148 - 0.539572
yfcY putative acetyl-CoA acetyltransferaseRecName: Full=3-ketoacyl-CoA thiolase; EC=2.3.1.16; AltName: Full=ACSs; AltName: Full=Acetyl-CoA acyltransferase; AltName: Full=Acyl-CoA ligase; AltName: Full=Beta-ketothiolase; AltName: Full=Fatty acid oxidation complex subunit beta; chromosome CDS2500252 1311 - 0.596491
yfjG putative oligoketide cyclase/lipid transport proteinSubName: Full=Putative oligoketide cyclase/lipid transport protein; chromosome CDS2825858 477 - 0.496855
ygbJ 3-hydroxyisobutyrate dehydrogenaseSubName: Full=3-hydroxyisobutyrate dehydrogenase; chromosome CDS3060704 924 - 0.599567
yghA putative oxidoreductaseSubName: Full=Putative oxidoreductase; chromosome CDS3318580 885 + 0.566102
yhbT putative lipid carrier proteinSubName: Full=Putative lipid carrier protein; chromosome CDS3439532 525 - 0.514286
yihG putative endonucleaseSubName: Full=Putative endonuclease; chromosome CDS4204835 909 - 0.462046
yihU putative oxidoreductaseRecName: Full=3-sulfolactaldehyde reductase; Short=SLA reductase; EC=1.1.1.-; chromosome CDS4233764 897 - 0.560758
ymdC putative phospholipaseSubName: Full=Putative phospholipase; chromosome CDS1233491 1485 + 0.536027
yohF putative oxidoreductaseSubName: Full=Putative oxidoreductase; EC=1.-.-.-; chromosome CDS2268002 762 - 0.547244
yqeF putative acetyl-CoA acetyltransferaseSubName: Full=Putative acetyl-CoA acetyltransferase; EC=2.3.1.9; chromosome CDS3179658 1179 - 0.584394