Gene list
Applied filters:
COG category: Lipid transport and metabolism
Organism: Shigella flexneri 2a str. 301, 301
Number of genes found: 94
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Shigella flexneri 2a str. 301, 301 | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | SF4282 | orf, conserved hypothetical protein | chromosome | CDS | 4460650 | 792 | + | 0.540404 |
NA | SF2875 | putative enzyme | chromosome | CDS | 2966981 | 549 | + | 0.513661 |
NA | SF1644 | similar to 2-deoxy-D-gluconate 3-dehydrogenase | chromosome | CDS | 1674136 | 621 | - | 0.454106 |
NA | SF1810 | probable enzyme | chromosome | CDS | 1847099 | 606 | - | 0.458746 |
NA | SF1603 | orf, conserved hypothetical protein | chromosome | CDS | 1630805 | 369 | - | 0.536585 |
NA | SF2419 | putative enzyme | chromosome | CDS | 2465978 | 2145 | - | 0.52028 |
NA | SF3023 | orf, conserved hypothetical protein | chromosome | CDS | 3121348 | 249 | + | 0.405622 |
NA | SF3021 | orf, conserved hypothetical protein | chromosome | CDS | 3118716 | 1689 | + | 0.529307 |
NA | SF2149 | orf, conserved hypothetical protein | chromosome | CDS | 2174876 | 900 | + | 0.494444 |
NA | SF4340 | putative carnitine operon oxidoreductase | chromosome | CDS | 4517759 | 1383 | + | 0.543022 |
NA | SF2678 | orf, conserved hypothetical protein | chromosome | CDS | 2752828 | 438 | - | 0.488584 |
NA | SF2420 | putative acyltransferase | chromosome | CDS | 2468122 | 1311 | - | 0.554539 |
NA | SF1467 | putative cytochrome oxidase | chromosome | CDS | 1502685 | 621 | + | 0.536232 |
NA | SF0315 | orf, conserved hypothetical protein | chromosome | CDS | 328428 | 1173 | + | 0.339301 |
NA | SF1807 | orf, partial conserved hypothetical protein | chromosome | CDS | 1843770 | 711 | - | 0.479606 |
NA | SF2261 | orf, conserved hypothetical protein | chromosome | CDS | 2292057 | 714 | + | 0.438375 |
aas | SF2846 | 2-acyl-glycerophospho-ethanolamine acyltransferase; acyl-acyl-carrier protein synthetase | chromosome | CDS | 2934215 | 2160 | - | 0.525 |
accA | SF0175 | acetyl CoA carboxylase, carboxytransferase component, alpha subunit | chromosome | CDS | 199565 | 960 | + | 0.527083 |
accB | SF3293 | acetyl CoA carboxylase, carrier of biotin, BCCP subunit | chromosome | CDS | 3393008 | 471 | + | 0.518047 |
accC | SF3294 | acetyl CoA carboxylase, biotin carboxylase subunit | chromosome | CDS | 3393489 | 1350 | + | 0.532593 |
accD | SF2392 | acetyl CoA carboxylase, carboxytransferase component, beta subunit | chromosome | CDS | 2441124 | 915 | - | 0.551913 |
acp | CP0124 | Acp, putative acyl carrier protein | pCP301 | CDS | 106938 | 237 | - | 0.291139 |
acpD | SF1803 | acyl carrier protein phosphodiesterase | chromosome | CDS | 1841205 | 606 | + | 0.516502 |
acpP | SF1098 | acyl carrier protein | chromosome | CDS | 1139332 | 237 | + | 0.481013 |
acpS | SF2625 | CoA:apo-[acyl-carrier-protein]pantetheinephospho transferase | chromosome | CDS | 2697833 | 381 | - | 0.503937 |
caiA | SF0036 | probable carnitine operon oxidoreductase | chromosome | CDS | 38674 | 1143 | - | 0.538933 |
caiC | SF0034 | probable crotonobetaine/carnitine-CoA ligase | chromosome | CDS | 35701 | 1569 | - | 0.50733 |
caiD | SF0033 | carnitine racemase | chromosome | CDS | 34807 | 894 | - | 0.524608 |
cdh | SF3996 | CDP-diacylglycerol phosphotidylhydrolase | chromosome | CDS | 4124913 | 756 | + | 0.486772 |
cdsA | SF0165 | CDP-diglyceride synthetase | chromosome | CDS | 186729 | 750 | + | 0.501333 |
cls | SF1250 | cardiolipin synthase | chromosome | CDS | 1302240 | 1461 | - | 0.516085 |
csgE | SF1033 | Curli production assembly/transport component CsgE precursor | chromosome | CDS | 1078313 | 390 | - | 0.428205 |
dxs | SF0357 | 1-deoxyxylulose-5-phosphate synthase; flavoprotein | chromosome | CDS | 367687 | 1863 | - | 0.539452 |
entA | SF0510 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | chromosome | CDS | 531914 | 747 | + | 0.575636 |
fabA | SF0954 | beta-hydroxydecanoyl thioester dehydrase, trans-2-decenoyl-ACP isomerase | chromosome | CDS | 1003019 | 519 | - | 0.531792 |
fabB | SF2399 | 3-oxoacyl-[acyl-carrier-protein] synthase I | chromosome | CDS | 2448487 | 1242 | - | 0.561192 |
fabD | SF1096 | malonyl-CoA-[acyl-carrier-protein] transacylase | chromosome | CDS | 1137445 | 930 | + | 0.550538 |
fabF | SF1099 | 3-oxoacyl-[acyl-carrier-protein] synthase II | chromosome | CDS | 1139654 | 1242 | + | 0.533011 |
fabG | SF1097 | 3-oxoacyl-[acyl-carrier-protein] reductase | chromosome | CDS | 1138387 | 735 | + | 0.514286 |
fabH | SF1095 | 3-oxoacyl-[acyl-carrier-protein] synthase III; acetyl CoA ACP transacylase | chromosome | CDS | 1136476 | 954 | + | 0.544025 |
fabI | SF1293 | enoyl-[acyl-carrier-protein] reductase (NADH) | chromosome | CDS | 1344523 | 789 | - | 0.532319 |
fabZ | SF0170 | (3R)-hydroxymyristol acyl carrier protein dehydratase | chromosome | CDS | 193045 | 456 | + | 0.504386 |
fadA | SF3921 | thiolase I, 3-ketoacyl-CoA thiolase, acetyl-CoA transferase | chromosome | CDS | 4040560 | 1164 | - | 0.582474 |
fadB | SF3922 | 4-enzyme protein, 3-hydroxyacyl-CoA dehydrogenase; 3-hydroxybutyryl-CoA epimerase; delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase; enoyl-CoA hydratas | chromosome | CDS | 4041733 | 2190 | - | 0.551142 |
fadD | SF1423 | acyl-CoA synthetase, long-chain-fatty-acid--CoA ligase | chromosome | CDS | 1460476 | 1752 | + | 0.511986 |
fadL | SF2421 | transport of long-chain fatty acids | chromosome | CDS | 2470268 | 1341 | + | 0.499627 |
gcpE | SF2561 | orf, conserved hypothetical protein | chromosome | CDS | 2630130 | 1128 | - | 0.531915 |
hcaB | SF2588 | 2,3-dihydroxy-2,3-dihydrophenylpropionatedehydro genase | chromosome | CDS | 2656078 | 813 | + | 0.560886 |
kduD | SF2852 | 2-deoxy-D-gluconate 3-dehydrogenase | chromosome | CDS | 2942858 | 762 | - | 0.519685 |
lytB | SF0026 | LytB protein | chromosome | CDS | 25707 | 951 | + | 0.550999 |
menE | SF2339 | O-succinylbenzoate-CoA ligase | chromosome | CDS | 2386378 | 1356 | - | 0.562684 |
pgpA | SF0355 | phosphatidylglycerophosphatase | chromosome | CDS | 366086 | 519 | + | 0.527938 |
pgpB | SF1282 | non-essential phosphatidylglycerophosphate phosphatase | chromosome | CDS | 1333614 | 765 | + | 0.500654 |
pgsA | SF1955 | phosphatidylglycerophosphate synthetase, CDP-1,2-diacyl-sn-glycero-3-phosphate phosphatidyl transferase | chromosome | CDS | 1988552 | 549 | - | 0.52459 |
phoN1 | CP0190 | PhoN1, periplasmic non specific acid ohosphatase | pCP301 | CDS | 159087 | 750 | + | 0.422667 |
phoN2/apy | CP0004 | PhoN2 (Apy), periplasmic phosphatase, apyrase, ATP diphosphohydrolase | pCP301 | CDS | 2371 | 741 | + | 0.422402 |
pldB | SF3903 | lysophospholipase L(2) | chromosome | CDS | 4022312 | 1023 | + | 0.536657 |
plsB | SF4164 | glycerol-3-phosphate acyltransferase | chromosome | CDS | 4333256 | 2484 | + | 0.548309 |
plsC | SF3062 | 1-acyl-sn-glycerol-3-phosphate acyltransferase | chromosome | CDS | 3158185 | 738 | - | 0.49458 |
plsX | SF1094 | PlsX protein | chromosome | CDS | 1135368 | 1041 | + | 0.519693 |
psd | SF4318 | phosphatidylserine decarboxylase | chromosome | CDS | 4493979 | 969 | - | 0.530444 |
pssA | SF2647 | phosphatidylserine synthase | chromosome | CDS | 2719768 | 1356 | + | 0.489676 |
sbm | SF2902 | methylmalonyl-CoA mutase (MCM) | chromosome | CDS | 2995111 | 2145 | + | 0.547319 |
sbmA | SF0236 | possible envelope protein | chromosome | CDS | 258498 | 1221 | - | 0.510238 |
sorD | SF4093 | putative sorbitol-6-phosphate 2-dehydrogenase | chromosome | CDS | 4251932 | 807 | - | 0.509294 |
srlD | SF2728 | glucitol (sorbitol)-6-phosphate dehydrogenase | chromosome | CDS | 2801410 | 780 | + | 0.530769 |
tesB | SF0397 | acyl-CoA thioesterase II | chromosome | CDS | 409394 | 861 | - | 0.524971 |
ucpA | SF2480 | putative oxidoreductase | chromosome | CDS | 2541136 | 792 | - | 0.54798 |
wecF | SF3868 | TDP-Fuc4NAc:lipidII transferase | chromosome | CDS | 3987166 | 1353 | + | 0.518847 |
yaeM | SF0163 | putative ATP-binding component of a transport system | chromosome | CDS | 184465 | 1197 | + | 0.524645 |
yaeS | SF0164 | orf, conserved hypothetical protein | chromosome | CDS | 185847 | 762 | + | 0.493438 |
yafH | SF0271 | putative acyl-CoA dehydrogenase | chromosome | CDS | 289022 | 2481 | - | 0.559049 |
ybaC | SF0421 | putative lipase | chromosome | CDS | 435576 | 819 | - | 0.507937 |
ybbO | SF0438 | putative oxidoreductase | chromosome | CDS | 454660 | 810 | - | 0.537037 |
ybcQ | SF0688 | putative Q protein | chromosome | CDS | 720285 | 381 | + | 0.485564 |
ybhO | SF0739 | putative synthetase | chromosome | CDS | 765325 | 1242 | - | 0.543478 |
ybjG | SF0794 | orf, conserved hypothetical protein | chromosome | CDS | 828215 | 597 | - | 0.519263 |
ychB | SF1211 | orf, conserved hypothetical protein | chromosome | CDS | 1258907 | 852 | - | 0.532864 |
yciA | SF1256 | orf, conserved hypothetical protein | chromosome | CDS | 1308170 | 399 | - | 0.483709 |
yciK | SF1273 | putative oxidoreductase | chromosome | CDS | 1322638 | 759 | - | 0.524374 |
ydgB | SF1627 | putative oxidoreductase | chromosome | CDS | 1655613 | 723 | + | 0.50899 |
ydiD | SF1529 | putative ligase/synthetase | chromosome | CDS | 1562330 | 1701 | - | 0.496767 |
ygbB | SF2769 | orf, conserved hypothetical protein | chromosome | CDS | 2843438 | 480 | - | 0.535417 |
ygbP | SF2770 | orf, conserved hypothetical protein | chromosome | CDS | 2843917 | 711 | - | 0.551336 |
ygfF | SF2888 | putative oxidoreductase | chromosome | CDS | 2979072 | 744 | - | 0.549731 |
ygfG | SF2904 | putative enzyme | chromosome | CDS | 2998212 | 828 | + | 0.480676 |
yghA | SF3049 | putative oxidoreductase | chromosome | CDS | 3145103 | 885 | + | 0.545763 |
yhaE | SF3162 | putative dehydrogenase | chromosome | CDS | 3263361 | 900 | - | 0.526667 |
yhbT | SF3198 | orf, conserved hypothetical protein | chromosome | CDS | 3292959 | 525 | - | 0.51619 |
yihG | SF3933 | putative endonuclease | chromosome | CDS | 4058358 | 933 | - | 0.454448 |
yihU | SF3954 | putative dehydrogenase | chromosome | CDS | 4085320 | 897 | - | 0.552954 |
yjgI | SF4241 | putative oxidoreductase | chromosome | CDS | 4413064 | 714 | + | 0.539216 |
ymdC | SF1042 | putative synthase | chromosome | CDS | 1083600 | 1482 | + | 0.505398 |
yqeF | SF2854 | putative acyltransferase | chromosome | CDS | 2944772 | 1182 | - | 0.536379 |