Gene list
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COG category: Lipid transport and metabolism
Organism: Desulfotalea psychrophila LSv54, LSv54
Number of genes found: 74
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| Desulfotalea psychrophila LSv54, LSv54 | |||||||||
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| Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
| NA | DP1333 | related to long-chain-fatty-acid--CoA ligase | SubName: Full=Related to long-chain-fatty-acid--CoA ligase; | chromosome | CDS | 1487777 | 1950 | + | 0.469231 |
| NA | DP2514 | related to 2-hydroxyglutaryl-CoA dehydratase, alpha subunit | SubName: Full=Related to 2-hydroxyglutaryl-CoA dehydratase, alpha subunit; | chromosome | CDS | 2862310 | 765 | - | 0.520261 |
| NA | DP0336 | related to 1-acyl-sn-glycerol-3-phosphate acyltransferase | SubName: Full=Related to 1-acyl-sn-glycerol-3-phosphate acyltransferase; | chromosome | CDS | 362518 | 786 | + | 0.465649 |
| NA | DP0741 | probable 3-oxoacyl-[acyl-carrier-protein] synthase III | SubName: Full=Probable 3-oxoacyl-[acyl-carrier-protein] synthase III; | chromosome | CDS | 835680 | 1035 | + | 0.505314 |
| NA | DP0749 | related to phosphatidylglycerophosphatase A | RecName: Full=Phosphatidylglycerophosphatase A; EC=3.1.3.27; AltName: Full=Phosphatidylglycerolphosphate phosphatase A; | chromosome | CDS | 846130 | 465 | + | 0.455914 |
| NA | DP2404 | similar to acyl carrier protein | RecName: Full=Acyl carrier protein; | chromosome | CDS | 2747434 | 252 | + | 0.436508 |
| NA | DP1846 | similar to acyl carrier protein dehydratase | SubName: Full=Similar to acyl carrier protein dehydratase; | chromosome | CDS | 2080718 | 486 | - | 0.493827 |
| NA | DP1160 | probable 1-deoxy-D-xylulose 5-phosphate reductoisomerase | RecName: Full=1-deoxy-D-xylulose 5-phosphate reductoisomerase; Short=DXP reductoisomerase; EC=1.1.1.267; AltName: Full=1-deoxyxylulose-5-phosphate reductoisomerase; AltName: Full=2-C-methyl-D-erythritol 4-phosphate synthase; | chromosome | CDS | 1292854 | 1158 | + | 0.507772 |
| NA | DP1850 | related to acyl-carrier protein | SubName: Full=Related to acyl-carrier protein; | chromosome | CDS | 2084021 | 273 | - | 0.443223 |
| NA | DP1812 | related to biotin carboxylase | SubName: Full=Related to biotin carboxylase; | chromosome | CDS | 2046082 | 1404 | + | 0.452991 |
| NA | DP0017 | probable O-antigen acetylase | SubName: Full=Probable O-antigen acetylase; | chromosome | CDS | 15364 | 2070 | - | 0.441063 |
| NA | DP2195 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2519579 | 603 | + | 0.434494 |
| NA | DP2013 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2294558 | 1446 | + | 0.32296 |
| NA | DP2093 | related to acyl carrier protein | RecName: Full=Acyl carrier protein; | chromosome | CDS | 2384079 | 246 | - | 0.51626 |
| NA | DP2365 | probable acid phosphatase | RecName: Full=Acid phosphatase; EC=3.1.3.2; | chromosome | CDS | 2698763 | 852 | - | 0.573944 |
| NA | DP1849 | related to 3-oxoacyl-acyl carrier protein synthase | SubName: Full=Related to 3-oxoacyl-acyl carrier protein synthase; | chromosome | CDS | 2082753 | 1209 | - | 0.548387 |
| NA | DP2771 | probable phosphatidylserine decarboxylase | RecName: Full=Phosphatidylserine decarboxylase proenzyme; EC=4.1.1.65; Contains: RecName: Full=Phosphatidylserine decarboxylase alpha chain; Contains: RecName: Full=Phosphatidylserine decarboxylase beta chain; | chromosome | CDS | 3137361 | 645 | + | 0.455814 |
| NA | DP0234 | related to phosphatidylserine decarboxylase, proenzyme | SubName: Full=Related to phosphatidylserine decarboxylase, proenzyme; | chromosome | CDS | 248241 | 1239 | - | 0.410008 |
| NA | DP2772 | probable CDP-diacylglycerol--serine O-phosphatidyltransferase | SubName: Full=Probable CDP-diacylglycerol--serine O-phosphatidyltransferase; | chromosome | CDS | 3138019 | 774 | + | 0.46124 |
| NA | DP1813 | related to acetyl-coenzyme A carboxylase (fusion of alpha and beta subunit) | SubName: Full=Related to acetyl-coenzyme A carboxylase (Fusion of alpha and beta subunit); | chromosome | CDS | 2047578 | 2262 | + | 0.483643 |
| NA | DP2790 | probable 3-oxoacyl-[acyl-carrier protein] reductase | SubName: Full=Probable 3-oxoacyl-[acyl-carrier protein] reductase; | chromosome | CDS | 3152211 | 765 | - | 0.457516 |
| NA | DP0250 | related to O-succinylbenzoic acid-CoA ligase (MenE) | SubName: Full=Related to O-succinylbenzoic acid-CoA ligase (MenE); | chromosome | CDS | 270078 | 1071 | - | 0.529412 |
| NA | DP0923 | related to enoyl-[acyl-carrier-protein] reductase [NADH] | RecName: Full=Enoyl-[acyl-carrier-protein] reductase [NADH]; EC=1.3.1.9; | chromosome | CDS | 1034602 | 801 | + | 0.453184 |
| NA | DP1858 | related to acyl carrier protein | RecName: Full=Acyl carrier protein; Short=ACP; | chromosome | CDS | 2091651 | 261 | - | 0.43295 |
| NA | DP0066 | related to long-chain fatty acid transport protein (FadL precursor) | SubName: Full=Related to long-chain fatty acid transport protein (FadL); | chromosome | CDS | 72941 | 1191 | - | 0.481948 |
| NA | DP2631 | probable peptide synthase | SubName: Full=Probable peptide synthase; | chromosome | CDS | 2992150 | 1626 | - | 0.51968 |
| NA | DP3018 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3416169 | 432 | + | 0.476852 |
| NA | DP0555 | probable long chain fatty acid-CoA ligase | SubName: Full=Probable long chain fatty acid-CoA ligase; | chromosome | CDS | 605075 | 1719 | - | 0.462478 |
| NA | DP2147 | probable oxidoreductase | SubName: Full=Probable oxidoreductase; | chromosome | CDS | 2464794 | 717 | + | 0.475593 |
| NA | DPPB27 | unknown protein | SubName: Full=Uncharacterized protein; | LSv54, large plasmid | CDS | 28199 | 279 | - | 0.458781 |
| NA | DP0257 | related to IspD/IspF bifunctional enzyme (Rhodobacter capsulatus) | RecName: Full=Bifunctional enzyme IspD/IspF; Includes: RecName: Full=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; EC=2.7.7.60; AltName: Full=4-diphosphocytidyl-2C-methyl-D-erythritol synthase; AltName: Full=MEP cytidylyltransferase; Short=MCT; Includes: RecName: Full=2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Short=MECDP-synthase; Short=MECPP-synthase; Short=MECPS; EC=4.6.1.12; | chromosome | CDS | 277029 | 1302 | + | 0.526114 |
| NA | DP1163 | probable peptidoglycan acetylation protein (GcpE) | RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; EC=1.17.7.1; AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; | chromosome | CDS | 1295888 | 1095 | + | 0.519635 |
| NA | DP1027 | probable enoyl-[acyl-carrier-protein] reductase [NADH] | RecName: Full=Enoyl-[acyl-carrier-protein] reductase [NADH]; EC=1.3.1.9; | chromosome | CDS | 1165593 | 795 | + | 0.485535 |
| NA | DP2794 | probable fatty acid/phospholipid synthesis protein (PlsX) | RecName: Full=Phosphate acyltransferase; EC=2.3.1.n2; AltName: Full=Acyl-ACP phosphotransacylase; AltName: Full=Acyl-[acyl-carrier-protein]--phosphate acyltransferase; AltName: Full=Phosphate-acyl-ACP acyltransferase; | chromosome | CDS | 3155125 | 879 | - | 0.440273 |
| NA | DP2403 | related to 3-oxoacyl-[acyl-carrier-protein] synthase | SubName: Full=Related to 3-oxoacyl-[acyl-carrier-protein] synthase; | chromosome | CDS | 2746053 | 1272 | + | 0.492925 |
| NA | DP1817 | related to 3-oxoacyl-[acyl-carrier-protein] synthase III | SubName: Full=Related to 3-oxoacyl-[acyl-carrier-protein] synthase III; | chromosome | CDS | 2053719 | 1149 | + | 0.529156 |
| NA | DP2407 | probable 3-oxoacyl-[acyl-carrier protein] reductase | SubName: Full=Probable 3-oxoacyl-[acyl-carrier protein] reductase; | chromosome | CDS | 2750684 | 741 | + | 0.493927 |
| NA | DP2793 | probable 3-oxoacyl-[acyl-carrier-protein] synthase III | RecName: Full=3-oxoacyl-[acyl-carrier-protein] synthase 3; EC=2.3.1.180; AltName: Full=3-oxoacyl-[acyl-carrier-protein] synthase III; AltName: Full=Beta-ketoacyl-ACP synthase III; Short=KAS III; | chromosome | CDS | 3154154 | 975 | - | 0.460513 |
| NA | DP0087 | related to AAS bifunctional protein | SubName: Full=Related to AAS bifunctional protein; | chromosome | CDS | 95999 | 1527 | + | 0.480681 |
| NA | DP2963 | related to SbmA protein | SubName: Full=Related to SbmA protein; | chromosome | CDS | 3353629 | 963 | - | 0.442368 |
| NA | DP1842 | unknown protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2076674 | 411 | - | 0.510949 |
| NA | DP2944 | probable (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase | RecName: Full=3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ; EC=4.2.1.59; AltName: Full=(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; Short=(3R)-hydroxymyristoyl-ACP dehydrase; AltName: Full=Beta-hydroxyacyl-ACP dehydratase; | chromosome | CDS | 3331338 | 453 | - | 0.448124 |
| NA | DP1159 | probable phosphatidate cytidylyltransferase | RecName: Full=Phosphatidate cytidylyltransferase; EC=2.7.7.41; | chromosome | CDS | 1292003 | 792 | + | 0.515152 |
| NA | DP2994 | related to lipase 1 | SubName: Full=Related to lipase 1; | chromosome | CDS | 3386992 | 1899 | - | 0.505529 |
| NA | DPPB41 | Predicted orf | SubName: Full=Predicted orf; | LSv54, large plasmid | CDS | 42550 | 246 | + | 0.52439 |
| NA | DP1202 | probable long-chain fatty-acid-CoA ligase | SubName: Full=Probable long-chain fatty-acid-CoA ligase; | chromosome | CDS | 1340941 | 1707 | + | 0.491506 |
| NA | DP1857 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2090914 | 741 | - | 0.479082 |
| NA | DP2700 | probable 1-deoxy-D-xylulose 5-phosphate synthase | RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; EC=2.2.1.7; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS; | chromosome | CDS | 3060429 | 1938 | + | 0.50516 |
| NA | DP2795 | related to fatty acid/phospholipid synthesis protein (PlsX) | chromosome | CDS | 3155973 | 174 | - | 0.534483 | |
| NA | DP2788 | probable 3-oxoacyl-[acyl-carrier-protein] synthase II | RecName: Full=3-oxoacyl-[acyl-carrier-protein] synthase 2; EC=2.3.1.179; | chromosome | CDS | 3150560 | 1245 | - | 0.461044 |
| NA | DP1847 | probable 3-oxoacyl-[acyl-carrier protein] reductase | SubName: Full=Probable 3-oxoacyl-[acyl-carrier protein] reductase; | chromosome | CDS | 2081184 | 735 | - | 0.508844 |
| NA | DPPB37 | probable acetyl-CoA synthetase | SubName: Full=Probable acetyl-CoA synthetase; | LSv54, large plasmid | CDS | 37566 | 1776 | + | 0.586712 |
| NA | DP1158 | probable undecaprenyl pyrophosphate synthetase | RecName: Full=Isoprenyl transferase; EC=2.5.1.-; | chromosome | CDS | 1291209 | 786 | + | 0.47201 |
| NA | DP2166 | probable LytB protein | RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase; EC=1.17.1.2; | chromosome | CDS | 2486890 | 942 | - | 0.514862 |
| NA | DP2735 | related to 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase | RecName: Full=4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Short=CMK; EC=2.7.1.148; AltName: Full=4-(cytidine-5-diphospho)-2-C-methyl-D-erythritol kinase; | chromosome | CDS | 3096682 | 900 | - | 0.477778 |
| NA | DP2355 | probable acid phosphatase | RecName: Full=Acid phosphatase; EC=3.1.3.2; | chromosome | CDS | 2688093 | 843 | - | 0.551601 |
| NA | DP0067 | related to long-chain-fatty-acid--CoA ligase | SubName: Full=Related to long-chain-fatty-acid--CoA ligase; | chromosome | CDS | 74258 | 1731 | - | 0.480069 |
| NA | DP1547 | unknown protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1728131 | 1143 | - | 0.504812 |
| NA | DP2495 | related to 3-oxoacyl-[acyl-carrier protein] reductase | SubName: Full=Related to 3-oxoacyl-[acyl-carrier protein] reductase; | chromosome | CDS | 2844416 | 825 | + | 0.528485 |
| NA | DP0914 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1025789 | 756 | - | 0.458995 |
| NA | DP2789 | probable acyl carrier protein | RecName: Full=Acyl carrier protein; Short=ACP; | chromosome | CDS | 3151911 | 228 | - | 0.359649 |
| NA | DP0152 | probable acyl CoA thioester hydrolase | SubName: Full=Probable acyl CoA thioester hydrolase; | chromosome | CDS | 169406 | 447 | + | 0.489933 |
| NA | DP0426 | probable CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | SubName: Full=Probable CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; | chromosome | CDS | 455629 | 570 | - | 0.503509 |
| NA | DP2304 | unknown protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2637564 | 1170 | + | 0.328205 |
| NA | DP2550 | related to malonyl CoA-acyl carrier protein transacylase | RecName: Full=Malonyl CoA-acyl carrier protein transacylase; EC=2.3.1.39; | chromosome | CDS | 2904893 | 1005 | - | 0.513433 |
| NA | DP2097 | probable acetyl-CoA synthetase | SubName: Full=Probable acetyl-CoA synthetase; | chromosome | CDS | 2387506 | 1776 | - | 0.583896 |
| NA | DP1840 | related to 3-oxoacyl-[acyl-carrier-protein] synthase | SubName: Full=Related to 3-oxoacyl-[acyl-carrier-protein] synthase; | chromosome | CDS | 2075030 | 1101 | - | 0.573115 |
| NA | DP2408 | related to (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase | SubName: Full=Related to (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase; | chromosome | CDS | 2751426 | 447 | + | 0.516779 |
| NA | DP0317 | conserved hypothetical membrane protein | SubName: Full=Conserved hypothetical membrane protein; | chromosome | CDS | 344732 | 618 | - | 0.521036 |
| NA | DP2742 | related to cardiolipin synthetase | RecName: Full=Cardiolipin synthase A; Short=CL synthase; EC=2.7.8.-; | chromosome | CDS | 3105632 | 1533 | + | 0.49576 |
| NA | DP1859 | related to 3-oxoacyl-[acyl-carrier-protein] synthase I | SubName: Full=Related to 3-oxoacyl-[acyl-carrier-protein] synthase I; | chromosome | CDS | 2091908 | 1248 | - | 0.515224 |
| NA | DP1975 | related to acyl carrier protein phosphodiesterase | RecName: Full=FMN-dependent NADH-azoreductase; EC=1.7.-.-; AltName: Full=Azo-dye reductase; AltName: Full=FMN-dependent NADH-azo compound oxidoreductase; | chromosome | CDS | 2242301 | 639 | + | 0.43349 |
| acs | DP0825 | probable acetyl-coenzyme A synthetase | SubName: Full=Probable acetyl-coenzyme A synthetase; | chromosome | CDS | 927600 | 1635 | + | 0.508257 |
| acs | DP0826 | probable acetyl-coenzyme A synthetase | SubName: Full=Probable acetyl-coenzyme A synthetase; | chromosome | CDS | 929401 | 231 | + | 0.47619 |
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