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2024-05-03 12:37:31

Gene list

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COG category: Lipid transport and metabolism
Organism: Candidatus Pelagibacter ubique HTCC1062, HTCC1062

Number of genes found: 54

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Candidatus Pelagibacter ubique HTCC1062, HTCC1062
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SAR11_0910 Putative undecaprenyl diphosphate synthasechromosome CDS875507 678 + 0.235988
NA SAR11_0304 short chain dehydrogenasechromosome CDS300899 672 + 0.33631
NA SAR11_0846 short chain dehydrogenasechromosome CDS815628 750 + 0.309333
NA SAR11_0863 MmsB-like proteinchromosome CDS832239 927 + 0.334412
NA SAR11_0674 short chain dehydrogenasechromosome CDS658050 762 - 0.312336
NA SAR11_0861 short chain dehydrogenasechromosome CDS829950 777 + 0.33462
NA SAR11_0942 conserved hypothetical proteinchromosome CDS927563 438 + 0.246575
NA SAR11_0082 probable short-chain dehydrogenasechromosome CDS97348 753 + 0.286853
NA SAR11_0869 short chain dehydrogenasechromosome CDS838936 747 + 0.330656
NA SAR11_0856 short chain dehydrogenasechromosome CDS825622 759 - 0.304348
NA SAR11_1289 short chain dehydrogenasechromosome CDS1224047 756 + 0.279101
NA SAR11_0767 short chain dehydrogenasechromosome CDS743871 747 + 0.323963
NA SAR11_0726 biotin carboxylasechromosome CDS708578 1338 - 0.331839
NA SAR11_0773 short chain dehydrogenasechromosome CDS749914 762 + 0.314961
NA SAR11_0531 FabG-like proteinchromosome CDS523831 780 + 0.30641
accA SAR11_0511 acetyl-CoA carboxylasechromosome CDS498707 1107 + 0.312556
accB SAR11_0727 acetyl-CoA carboxylase biotin carboxyl carrier proteinchromosome CDS709915 426 - 0.328638
accD SAR11_0486 Acetyl-coenzyme A carboxylase carboxyl transferase subunit betachromosome CDS475411 930 - 0.335484
acpP SAR11_0708 Acyl carrier protein (ACP)chromosome CDS691701 240 + 0.3375
acpS SAR11_1055 Holo-[acyl-carrier protein] synthase (Holo-ACP synthase)chromosome CDS1024245 387 - 0.235142
acsA SAR11_0314 acetyl-CoA synthasechromosome CDS310070 2046 + 0.3348
azoR SAR11_0782 [acyl-carrier-protein] phosphodiesterasechromosome CDS760165 582 + 0.292096
cdsA SAR11_0911 phosphatidate cytidylyltransferasechromosome CDS876184 663 + 0.241327
crtB SAR11_0121 Phytoene synthasechromosome CDS130930 852 + 0.24061
dxs SAR11_0611 1-D-deoxyxylulose 5-phosphate synthasechromosome CDS596553 1914 + 0.338036
faa1 SAR11_0422 Putative long-chain-fatty-acid--CoA ligase (Long-chain acyl-CoA synthetase)chromosome CDS408798 1518 + 0.270092
fabA SAR11_0397 3-hydroxydecanoyl-(acyl-carrier-protein)dehydrat asechromosome CDS388594 501 - 0.371257
fabB SAR11_0396 3-oxoacyl-[acyl-carrier-protein] synthasechromosome CDS387383 1212 - 0.363861
fabD SAR11_0706 [acyl-carrier-protein] S-malonyltransferasechromosome CDS689990 933 + 0.300107
fabG SAR11_0707 3-oxoacyl-[acyl-carrier-protein] reductasechromosome CDS690915 738 + 0.285908
fabI SAR11_0395 enoyl-[acyl-carrier-protein] reductase (NADH2)chromosome CDS386597 777 - 0.343629
fabZ SAR11_0915 (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratasechromosome CDS880790 441 + 0.337868
fadB SAR11_1333 3-hydroxyacyl-CoA dehydrogenasechromosome CDS1268370 2223 - 0.299145
fadD SAR11_0248 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases IIchromosome CDS250536 1629 - 0.320442
gcpE SAR11_0517 peptidoglycan acetylationchromosome CDS506212 1101 + 0.315168
gnd SAR11_0778 6-phosphogluconate dehydrogenasechromosome CDS755023 870 + 0.326437
ispD SAR11_0945 IspD/ispF bifunctional enzymechromosome CDS928972 1116 - 0.247312
ispE SAR11_0105 4-diphosphocytidyl-2-C-methyl-D-erythritolkinasechromosome CDS116257 846 - 0.255319
lytB SAR11_0124 4-hydroxy-3-methylbut-2-enyl diphosphate reductasechromosome CDS133762 945 + 0.316402
mmgC SAR11_0249 acyl-CoA dehydrogenasechromosome CDS252166 1764 - 0.316893
mmsB SAR11_1196 3-hydroxyisobutyrate dehydrogenasechromosome CDS1147089 867 + 0.347174
pgpA SAR11_0944 phosphatidylglycerophosphatase Achromosome CDS928476 504 - 0.255952
pgsA SAR11_0085 CDP-diacylglycerolchromosome CDS100347 585 + 0.297436
plsC SAR11_0412 probable 1-acyl-sn-glycerol-3-phosphate acyltransferasechromosome CDS401348 702 - 0.262108
plsX SAR11_1036 fatty acid/phospholipid synthesis protein PlsXchromosome CDS1009420 1002 - 0.286427
prpE SAR11_0624 hypothetical proteinchromosome CDS612190 1896 - 0.336498
psd2 SAR11_0645 phosphatidylserine decarboxylasechromosome CDS632494 648 + 0.310185
pssA SAR11_0646 phosphatidylserine synthasechromosome CDS633145 804 + 0.284826
sbmA SAR11_1008 probable ABC-transporter inner membrane protein SbmAchromosome CDS986586 993 + 0.328298
thlA SAR11_0428 Acetyl-CoA acetyltransferasechromosome CDS415586 1188 + 0.329125
tktC SAR11_0536 transketolase familychromosome CDS529658 930 - 0.253763
ucpA SAR11_0775 oxidoreductasechromosome CDS752477 744 + 0.330645
yaeM SAR11_0912 1-deoxy-D-xylulose 5-phosphate reductoisomerasechromosome CDS876848 1167 + 0.210797
ydbS SAR11_1260 enoyl-CoA hydratasechromosome CDS1198497 786 - 0.298982