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2024-04-29 05:15:12

Gene list

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COG category: Lipid transport and metabolism
Organism: Colwellia psychrerythraea 34H, 34H; BAA-681

Number of genes found: 138

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Colwellia psychrerythraea 34H, 34H; BAA-681
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA CPS_4754 enoyl-CoA hydratase/isomerase family proteinchromosome CDS5030517 729 - 0.37037
NA CPS_1608 putative 3-oxoacyl-(acyl-carrier protein) reductasechromosome CDS1654971 771 + 0.402075
NA CPS_4830 acyltransferase family proteinchromosome CDS5121430 912 - 0.344298
NA CPS_2158 glucose 1-dehydrogenasechromosome CDS2264802 753 - 0.436919
NA CPS_3828 aromatic rich family proteinchromosome CDS3995158 441 - 0.353741
NA CPS_0917 acid-CoA ligase family proteinchromosome CDS920056 1896 - 0.416667
NA CPS_0571 enoyl-CoA hydratase/isomerase family proteinchromosome CDS570057 822 + 0.384428
NA CPS_5002 acyltransferase family proteinchromosome CDS5317601 1089 + 0.337006
NA CPS_3319 enoyl-CoA hydratase/isomerase family proteinchromosome CDS3442399 813 - 0.394834
NA CPS_1788 MaoC domain proteinchromosome CDS1831869 687 + 0.36099
NA CPS_3346 enoyl-CoA hydratase/isomerase family proteinchromosome CDS3473943 879 - 0.376564
NA CPS_4259 AMP-binding proteinchromosome CDS4488598 1626 + 0.405904
NA CPS_1441 PAP2 family proteinchromosome CDS1482555 528 + 0.431818
NA CPS_2772 conserved hypothetical proteinchromosome CDS2893040 231 + 0.333333
NA CPS_0657 enoyl-CoA hydratase/isomerase family proteinchromosome CDS656054 777 - 0.396396
NA CPS_0656 enoyl-CoA hydratase/isomerase family proteinchromosome CDS654948 1107 - 0.400181
NA CPS_1382 oxidoreductase, short-chain dehydrogenase/reductase familychromosome CDS1422641 756 + 0.398148
NA CPS_2263 acyl-CoA dehydrogenase family proteinchromosome CDS2357301 1821 + 0.37397
NA CPS_1430 enoyl-CoA hydratase/isomerase family proteinchromosome CDS1467493 768 + 0.473958
NA CPS_1947 enoyl-CoA hydratase/isomerase family proteinchromosome CDS2010414 813 + 0.397294
NA CPS_1680 oxidoreductase, short chain dehydrogenase/reductase familychromosome CDS1725262 756 - 0.373016
NA CPS_4740 putative 1-acyl-sn-glycerol-3-phosphate acyltransferasechromosome CDS5019323 657 + 0.38204
NA CPS_3618 conserved hypothetical proteinchromosome CDS3754970 825 - 0.333333
NA CPS_4789 beta-ketoacyl-ACP synthase family proteinchromosome CDS5070496 1896 + 0.412447
NA CPS_0669 thiolasechromosome CDS670653 1170 + 0.457265
NA CPS_1821 acyltransferase family proteinchromosome CDS1871114 1239 + 0.344633
NA CPS_2520 conserved hypothetical proteinchromosome CDS2624065 600 - 0.391667
NA CPS_2407 lipase family proteinchromosome CDS2519228 1074 + 0.358473
NA CPS_0698 long-chain fatty acid transport proteinchromosome CDS704221 1260 - 0.416667
NA CPS_2719 acyl-CoA dehydrogenasechromosome CDS2837509 1158 + 0.433506
NA CPS_2626 acetyl-CoA acetyltransferasechromosome CDS2729887 1209 + 0.488007
NA CPS_0661 AMP-binding enzyme family proteinchromosome CDS660899 1563 - 0.426104
NA CPS_3345 acid-CoA ligase family proteinchromosome CDS3472300 1644 - 0.377737
NA CPS_4421 hypothetical proteinchromosome CDS4662106 1161 + 0.384152
NA CPS_0758 hypothetical proteinchromosome CDS767326 1074 - 0.402235
NA CPS_0824 oxidoreductase, short-chain dehydrogenase/reductase familychromosome CDS838732 768 + 0.394531
NA CPS_0664 MaoC domain proteinchromosome CDS664446 414 + 0.427536
NA CPS_3727 oxidoreductase, short chain dehydrogenase/reductase familychromosome CDS3887551 840 + 0.436905
NA CPS_4155 oxidoreductase, short chain dehydrogenase/reductase familychromosome CDS4367341 816 + 0.392157
NA CPS_2129 SCP-2 sterol transfer family proteinchromosome CDS2222696 477 - 0.36478
NA CPS_2751 conserved hypothetical proteinchromosome CDS2865373 723 - 0.35823
NA CPS_3416 putative branched-chain amino acid ABC transporter, periplasmic branched-chain amino acid-bindingchromosome CDS3546129 1971 - 0.386606
NA CPS_4153 oxidoreductase, short chain dehydrogenase/reductase familychromosome CDS4365474 822 + 0.381995
NA CPS_0516 oxidoreductase, short-chain dehydrogenase/reductase familychromosome CDS515464 735 - 0.370068
NA CPS_5005 acyltransferase family proteinchromosome CDS5321311 1011 + 0.346192
NA CPS_3255 acyltransferase family proteinchromosome CDS3387307 1095 + 0.294064
NA CPS_0665 putative 3-oxoacyl-(acyl-carrier-protein) reductasechromosome CDS664915 828 + 0.421498
NA CPS_0941 putative lipasechromosome CDS950072 984 + 0.398374
NA CPS_1601 enoyl-CoA hydratase/isomerase family proteinchromosome CDS1647281 789 - 0.409379
NA CPS_0658 acyl-CoA dehydrogenasechromosome CDS656886 1167 - 0.425021
NA CPS_5009 putative lipopolysaccharide modification acyltransferasechromosome CDS5324373 1971 - 0.351598
NA CPS_0673 enoyl-CoA hydratase/isomerase family proteinchromosome CDS674360 726 + 0.380165
NA CPS_1605 acetyl-CoA acetyltransferasechromosome CDS1652165 1185 + 0.421941
NA CPS_3024 oxidoreductase, short-chain dehydrogenase/reductase family, truncatedchromosome CDS3163411 363 + 0.371901
NA CPS_2155 AMP-binding proteinchromosome CDS2261258 1797 + 0.41291
NA CPS_1607 enoyl-CoA hydratase/isomerase family proteinchromosome CDS1653619 1173 + 0.388747
NA CPS_1696 thioesterase family proteinchromosome CDS1740960 378 + 0.391534
NA CPS_2503 hypothetical proteinchromosome CDS2614602 390 + 0.287179
NA CPS_2677 oxidoreductase, short chain dehydrogenase/reductase familychromosome CDS2787907 777 - 0.392535
NA CPS_3371 MaoC domain proteinchromosome CDS3499285 426 - 0.394366
NA CPS_3039 phopholipase D domain proteinchromosome CDS3175947 1533 + 0.439008
NA CPS_4308 oxidoreductase, short chain dehydrogenase/reductase familychromosome CDS4536677 693 + 0.40404
NA CPS_0114 hypothetical proteinchromosome CDS121025 1362 + 0.394273
NA CPS_0997 acyltransferase family proteinchromosome CDS1017002 873 - 0.37457
NA CPS_2007 3-hydroxyisobutyrate dehydrogenase family proteinchromosome CDS2077697 864 + 0.431713
NA CPS_1068 putative 3-oxoacyl-(acyl-carrier-protein) synthase IIIchromosome CDS1090765 1119 + 0.382484
NA CPS_0440 thioesterase family proteinchromosome CDS440948 477 - 0.408805
NA CPS_2153 3-oxoacyl-(acyl carrier protein) synthase III, homologchromosome CDS2259245 1050 + 0.422857
NA CPS_2720 3-hydroxyacyl-CoA dehydrogenasechromosome CDS2838681 768 + 0.4375
NA CPS_2501 conserved domain proteinchromosome CDS2613899 189 + 0.31746
NA CPS_0671 conserved hypothetical proteinchromosome CDS673669 501 + 0.383234
NA CPS_1177 acyl-CoA dehydrogenase family proteinchromosome CDS1200697 1797 + 0.398998
NA CPS_1175 oxidoreductase, short-chain dehydrogenase/reductase familychromosome CDS1198691 726 - 0.389807
NA CPS_0666 acyl-CoA dehydrogenasechromosome CDS665753 1161 + 0.420327
NA CPS_2528 enoyl-CoA hydratase/isomerase family proteinchromosome CDS2633468 846 + 0.41253
NA CPS_1191 oxidoreductase, short-chain dehydrogenase/reductase familychromosome CDS1216995 738 - 0.380759
NA CPS_1764 putative lipoproteinchromosome CDS1811079 318 + 0.358491
NA CPS_4206 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase family proteinchromosome CDS4427022 1044 + 0.354406
NA CPS_4476 acyl-CoA dehydrogenase family proteinchromosome CDS4714377 1809 - 0.392482
NA CPS_0675 AMP-binding proteinchromosome CDS677701 1644 - 0.391728
NA CPS_1781 lipase family proteinchromosome CDS1824186 834 + 0.353717
NA CPS_3722 conserved hypothetical proteinchromosome CDS3878642 3450 - 0.377391
accA CPS_1571 acetyl-CoA carboxylase, carboxyl transferase, alpha subunitchromosome CDS1616950 957 + 0.419018
accB CPS_0947 acetyl-CoA carboxylase, biotin carboxyl carrier proteinchromosome CDS955471 447 - 0.425056
accC CPS_0946 acetyl-CoA carboxylase, biotin carboxylasechromosome CDS954102 1347 - 0.400148
accD CPS_3802 acetyl-CoA carboxylase, carboxyl transferase, beta subunitchromosome CDS3964186 858 - 0.397436
acpD1 CPS_1679 FMN-dependent NADH-azoreductasechromosome CDS1724596 579 - 0.355786
acpD2 CPS_2972 FMN-dependent NADH-azoreductasechromosome CDS3110416 660 + 0.348485
acpP CPS_2298 acyl carrier proteinchromosome CDS2397760 234 + 0.350427
acs CPS_3955 acetyl-CoA synthetasechromosome CDS4139779 1947 - 0.407807
bdhA1 CPS_0943 D-beta-hydroxybutyrate dehydrogenasechromosome CDS952016 813 - 0.416974
bdhA2 CPS_4091 D-beta-hydroxybutyrate dehydrogenasechromosome CDS4305144 777 - 0.370656
cdsA CPS_1558 phosphatidate cytidylyltransferasechromosome CDS1601592 864 + 0.375
dxnG CPS_1598 3-oxoadipate CoA-succinyl transferase, alpha subunitchromosome CDS1643400 720 - 0.416667
dxnH CPS_1597 3-oxoadipate CoA-succinyl transferase, beta subunitchromosome CDS1642744 657 - 0.400304
dxr CPS_1559 1-deoxy-D-xylulose 5-phosphate reductoisomerasechromosome CDS1602504 1236 + 0.403722
dxs CPS_1088 1-deoxy-D-xylulose-5-phosphate synthasechromosome CDS1107564 1893 - 0.393027
fabA CPS_3274 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabAchromosome CDS3403203 516 + 0.389535
fabB CPS_3807 3-oxoacyl-(acyl-carrier-protein) synthase Ichromosome CDS3972671 1212 - 0.405116
fabD CPS_2296 malonyl CoA-acyl carrier protein transacylasechromosome CDS2395797 945 + 0.415873
fabF CPS_2299 3-oxoacyl-[acyl-carrier-protein] synthase IIchromosome CDS2398417 1239 + 0.422922
fabG CPS_2297 3-oxoacyl-(acyl-carrier-protein) reductasechromosome CDS2396853 747 + 0.389558
fabZ CPS_1564 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZchromosome CDS1609744 453 + 0.357616
fadA CPS_0392 fatty oxidation complex, beta subunitchromosome CDS395366 1161 - 0.427218
fadB CPS_0393 fatty oxidation complex, alpha subunitchromosome CDS396542 2169 - 0.4071
fadD1 CPS_1189 long-chain-fatty-acid--CoA ligasechromosome CDS1215202 1656 + 0.394324
fadD2 CPS_3427 long-chain-fatty-acid--CoA ligasechromosome CDS3562424 1641 - 0.396709
fadE CPS_2265 acyl-coenzyme A dehydrogenasechromosome CDS2360115 2430 - 0.403292
fadI CPS_3157 fatty oxidation complex, beta subunitchromosome CDS3287920 1308 - 0.431193
fadJ CPS_3156 fatty oxidation complex, alpha subunitchromosome CDS3285557 2364 - 0.392132
gcdH CPS_4667 glutaryl-CoA dehydrogenasechromosome CDS4932604 1185 - 0.403376
ispD CPS_1072 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferasechromosome CDS1092969 732 + 0.392076
ispE CPS_3556 4-diphosphocytidyl-2C-methyl-D-erythritol kinasechromosome CDS3694336 903 + 0.393134
ispF CPS_1073 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthasechromosome CDS1093771 513 + 0.405458
ispG CPS_4252 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthasechromosome CDS4480764 1131 - 0.398762
ispH CPS_1211 4-hydroxy-3-methylbut-2-enyl diphosphate reductasechromosome CDS1244343 930 + 0.403226
ivd CPS_1603 isovaleryl-CoA dehydrogenasechromosome CDS1650205 1170 - 0.400855
mccA CPS_1600 methylcrotonyl-CoA carboxylase, alpha subunitchromosome CDS1645168 2046 - 0.416422
mccB CPS_1602 methylcrotonyl CoA carboxylase, beta subunitchromosome CDS1648264 1608 - 0.42102
mmsB CPS_3424 3-hydroxyisobutyrate dehydrogenasechromosome CDS3557828 891 + 0.411897
pcaF CPS_3594 beta-ketoadipyl CoA thiolasechromosome CDS3731280 1230 + 0.45935
pcaI CPS_3591 3-oxoadipate CoA-transferase, alpha subunitchromosome CDS3728097 831 + 0.4284
pcaJ CPS_3592 3-oxoadipate CoA-transferase, beta subunitchromosome CDS3728924 768 + 0.423177
pgpA CPS_1534 phosphatidylglycerophosphatase Achromosome CDS1575280 474 + 0.383966
pgsA CPS_3269 CDP-diacylglycerol--glycerol-3-phosphate3-phosph atidyltransferasechromosome CDS3398979 582 - 0.395189
phaZ CPS_4090 polyhydroxyalkanoate depolymerase, intracellularchromosome CDS4303836 1218 + 0.353038
phbB1 CPS_2625 acetoacetyl-CoA reductasechromosome CDS2729096 747 + 0.444444
phbB2 CPS_4092 acetoacetyl-CoA reductasechromosome CDS4306609 723 + 0.401107
phbC CPS_4088 poly-beta-hydroxybutyrate polymerasechromosome CDS4301593 1764 - 0.363946
pldB CPS_4384 lysophospholipase L2chromosome CDS4620237 1005 + 0.370149
plsB CPS_0133 glycerol-3-phosphate acyltransferasechromosome CDS138966 2436 - 0.386699
plsC CPS_1016 1-acyl-sn-glycerol-3-phosphate acyltransferasechromosome CDS1037922 729 + 0.377229
plsX CPS_2295 fatty acid/phospholipid synthesis protein PlsXchromosome CDS2394443 1050 + 0.384762
psd CPS_4381 phosphatidylserine decarboxylasechromosome CDS4616599 894 + 0.403803
pssA CPS_0926 CDP-diacylglycerol--serineO-phosphatidyltransferasechromosome CDS931386 1329 + 0.367946
tagD CPS_4205 glycerol-3-phosphate cytidyltransferasechromosome CDS4426608 396 + 0.353535
tesB CPS_4827 acyl-CoA thioesterase IIchromosome CDS5118610 858 + 0.420746
uppS CPS_1557 undecaprenyl diphosphate synthasechromosome CDS1600727 765 + 0.398693