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2024-05-19 08:38:20

Gene list

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COG category: Lipid transport and metabolism
Organism: Vibrio fischeri ES114, ES114

Number of genes found: 88

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Vibrio fischeri ES114, ES114
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA VF2387 biotin carboxylaseSubName: Full=Acetyl-CoA carboxylase, biotin carboxylase subunit; EC=6.4.1.2; chromosome I CDS2683392 1344 + 0.435268
NA VF1951 (3R)-hydroxymyristoyl-[acyl carrier protein] dehydrataseRecName: Full=3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ; EC=4.2.1.59; AltName: Full=(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; Short=(3R)-hydroxymyristoyl-ACP dehydrase; AltName: Full=Beta-hydroxyacyl-ACP dehydratase; chromosome I CDS2186152 453 - 0.377483
NA VF1695 acetyl-coenzyme A carboxylase carboxyl transferase subunit betaRecName: Full=Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; Short=ACCase subunit beta; Short=Acetyl-CoA carboxylase carboxyltransferase subunit beta; EC=6.4.1.2; chromosome I CDS1910499 885 - 0.40565
NA VFA0841 3-hydroxy-3-methylglutaryl-coenzyme A reductaseSubName: Full=3-hydroxy-3-methylglutaryl-coenzyme A reductase; EC=1.1.1.34; chromosome II CDS950929 1260 + 0.451587
NA VF2256 long-chain-fatty-acid--CoA ligaseSubName: Full=Long-chain-fatty-acid--CoA ligase; EC=6.2.1.3; chromosome I CDS2538498 1545 + 0.389644
NA VFA0844 outer membrane protein P1 precursorSubName: Full=Outer membrane protein P1; chromosome II CDS953035 1152 + 0.407118
NA VF2554 1-acyl-sn-glycerol-3-phosphate acyltransferaseSubName: Full=Predicted endonuclease; EC=2.3.1.51; chromosome I CDS2883372 876 - 0.355023
NA VF0847 acyl carrier proteinRecName: Full=Acyl carrier protein; Short=ACP; chromosome I CDS933795 258 + 0.368217
NA VF0846 acyl carrier proteinSubName: Full=Acyl carrier protein; chromosome I CDS933487 297 + 0.37037
NA VF2073 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferaseRecName: Full=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; EC=2.7.7.60; AltName: Full=4-diphosphocytidyl-2C-methyl-D-erythritol synthase; AltName: Full=MEP cytidylyltransferase; Short=MCT; chromosome I CDS2313922 717 - 0.408647
NA VF0859 3-oxoacyl-[acyl-carrier protein] reductaseSubName: Full=3-oxoacyl-(Acyl-carrier-protein) reductase, putative; EC=1.1.1.100; chromosome I CDS945361 726 + 0.429752
NA VF1811 3-ketoacyl-CoA thiolaseRecName: Full=3-ketoacyl-CoA thiolase; EC=2.3.1.16; AltName: Full=ACSs; AltName: Full=Acetyl-CoA acyltransferase; AltName: Full=Acyl-CoA ligase; AltName: Full=Beta-ketothiolase; AltName: Full=Fatty acid oxidation complex subunit beta; chromosome I CDS2049123 1329 - 0.399549
NA VF1812 long-chain fatty acid transport protein precursorSubName: Full=Long-chain fatty acid transport protein; chromosome I CDS2051332 1227 + 0.397718
NA VF0495 sterol binding proteinSubName: Full=Predicted lipid carrier protein; chromosome I CDS534213 537 + 0.353817
NA VF1206 phosphoesterase, PAP2 familySubName: Full=Phosphoesterase, PAP2 family; chromosome I CDS1346898 549 + 0.424408
NA VF2083 holo-[acyl-carrier protein] synthaseRecName: Full=Holo-[acyl-carrier-protein] synthase; Short=Holo-ACP synthase; EC=2.7.8.7; AltName: Full=4-phosphopantetheinyl transferase AcpS; chromosome I CDS2327128 381 - 0.375328
NA VF2384 acetyl-coenzyme A synthetase chromosome I CDS2681390 597 + 0.423786
NA VF0784 short chain dehydrogenaseSubName: Full=Predicted oxidoreductase with NAD(P)-binding Rossmann-fold domain; chromosome I CDS858089 828 - 0.375604
NA VF0403 isopentenyl-diphosphate delta-isomeraseRecName: Full=Isopentenyl-diphosphate Delta-isomerase; Short=IPP isomerase; EC=5.3.3.2; AltName: Full=IPP:DMAPP isomerase; AltName: Full=Isopentenyl pyrophosphate isomerase; chromosome I CDS433030 546 + 0.369963
NA VF1666 O-succinylbenzoic acid--CoA ligaseSubName: Full=O-succinylbenzoate-CoA ligase; EC=6.2.1.26; chromosome I CDS1878617 1401 - 0.428266
NA VF1742 3-oxoacyl-[acyl-carrier-protein] synthase IIIRecName: Full=3-oxoacyl-[acyl-carrier-protein] synthase 3; EC=2.3.1.180; AltName: Full=3-oxoacyl-[acyl-carrier-protein] synthase III; AltName: Full=Beta-ketoacyl-ACP synthase III; Short=KAS III; chromosome I CDS1968185 954 - 0.400419
NA VFA0173 3-hydroxyisobutyrate dehydrogenase and related proteinsSubName: Full=3-hydroxyisobutyrate dehydrogenase; EC=1.1.1.31; chromosome II CDS196628 882 - 0.420635
NA VF1958 undecaprenyl pyrophosphate synthetaseRecName: Full=Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific); EC=2.5.1.31; AltName: Full=Ditrans,polycis-undecaprenylcistransferase; AltName: Full=Undecaprenyl diphosphate synthase; Short=UDS; AltName: Full=Undecaprenyl pyrophosphate synthase; Short=UPP synthase; chromosome I CDS2194322 774 - 0.387597
NA VF1169 acyl-CoA hydrolaseSubName: Full=Acyl-CoA hydrolase; EC=3.1.2.20; chromosome I CDS1302317 486 + 0.446502
NA VF1946 acetyl-coenzyme A carboxylase carboxyl transferase subunit alphaRecName: Full=Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Short=ACCase subunit alpha; Short=Acetyl-CoA carboxylase carboxyltransferase subunit alpha; EC=6.4.1.2; chromosome I CDS2179023 960 - 0.414583
NA VFA0763 short chain dehydrogenaseSubName: Full=Short chain dehydrogenase; chromosome II CDS860281 741 - 0.37247
NA VF1957 phosphatidate cytidylyltransferaseRecName: Full=Phosphatidate cytidylyltransferase; EC=2.7.7.41; chromosome I CDS2193479 780 - 0.387179
NA VF2481 lysophospholipase L2SubName: Full=Lysophospholipase L(2); EC=3.1.1.5; chromosome I CDS2788010 969 + 0.407637
NA VF0857 3-oxoacyl-[acyl-carrier-protein] synthaseSubName: Full=3-oxoacyl-(Acyl carrier protein) synthase; EC=2.3.1.41; chromosome I CDS943693 1188 + 0.416667
NA VFA0023 enoyl-CoA hydrataseSubName: Full=Enoyl-CoA hydratase; EC=4.2.1.17; chromosome II CDS25486 813 - 0.387454
NA VF1606 cardiolipin synthetaseRecName: Full=Cardiolipin synthase A; Short=CL synthase; EC=2.7.8.-; chromosome I CDS1804911 1455 + 0.406186
NA VF2386 biotin carboxyl carrier protein of acetyl-CoA carboxylaseSubName: Full=Acetyl CoA carboxylase, BCCP subunit; EC=6.4.1.2; chromosome I CDS2682922 459 + 0.45098
NA VFA0274 acyl-CoA desaturaseSubName: Full=Acyl-CoA desaturase; EC=1.14.19.1; chromosome II CDS304853 1128 - 0.355496
NA VF2428 CDP-diacylglycerol--serineO-phosphatidyltransferaseSubName: Full=Phosphatidylserine synthase (CDP-diacylglycerol-serine O-phosphatidyltransferase); EC=2.7.8.8; chromosome I CDS2720780 1353 + 0.342942
NA VF2072 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthaseRecName: Full=2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Short=MECDP-synthase; Short=MECPP-synthase; Short=MECPS; EC=4.6.1.12; chromosome I CDS2313446 477 - 0.427673
NA VFA0472 transporterSubName: Full=Transporter; chromosome II CDS543900 624 + 0.341346
NA VF1741 malonyl-CoA-[acyl-carrier-protein] transacylaseRecName: Full=Malonyl CoA-acyl carrier protein transacylase; EC=2.3.1.39; chromosome I CDS1967194 915 - 0.414208
NA VF0765 4-diphosphocytidyl-2-C-methyl-D-erythritolkinaseRecName: Full=4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Short=CMK; EC=2.7.1.148; AltName: Full=4-(cytidine-5-diphospho)-2-C-methyl-D-erythritol kinase; chromosome I CDS835853 867 - 0.403691
NA VFA0673 SbmA proteinSubName: Full=Predicted transporter SbmA; chromosome II CDS744200 1020 - 0.392157
NA VF0706 phosphatidylglycerophosphatase ARecName: Full=Phosphatidylglycerophosphatase A; EC=3.1.3.27; AltName: Full=Phosphatidylglycerolphosphate phosphatase A; chromosome I CDS773672 504 + 0.376984
NA VF1813 long-chain fatty acid transport protein precursorSubName: Full=Long-chain fatty acid transport protein; chromosome I CDS2053076 1299 + 0.414165
NA VF0470 4-hydroxy-3-methylbut-2-enyl diphosphate reductaseRecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase; EC=1.17.1.2; chromosome I CDS502738 945 + 0.374603
NA VF2331 phosphatidylserine decarboxylaseRecName: Full=Phosphatidylserine decarboxylase proenzyme; EC=4.1.1.65; Contains: RecName: Full=Phosphatidylserine decarboxylase alpha chain; Contains: RecName: Full=Phosphatidylserine decarboxylase beta chain; chromosome I CDS2627458 864 + 0.391204
NA VF0533 long-chain-fatty-acid--CoA ligaseSubName: Full=Long-chain-fatty-acid--CoA ligase; EC=6.2.1.3; chromosome I CDS572612 1677 - 0.381038
NA VF1577 acyl-CoA thioesterase IISubName: Full=Acyl-CoA thioesterase II; EC=3.1.2.-; chromosome I CDS1767951 864 + 0.409722
NA VF2264 long-chain-fatty-acid--CoA ligaseSubName: Full=Long-chain-fatty-acid--CoA ligase; EC=6.2.1.3; chromosome I CDS2547947 1839 - 0.391517
NA VF0629 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthaseRecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; EC=1.17.7.1; AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; chromosome I CDS685477 1119 + 0.403038
NA VF0845 1-acyl-sn-glycerol-3-phosphate acyltransferaseSubName: Full=1-acyl-sn-glycerol-3-phosphate acyltransferase; EC=2.3.1.51; chromosome I CDS932721 798 + 0.373434
NA VF0402 1-acyl-sn-glycerol-3-phosphate acyltransferaseSubName: Full=1-acyl-sn-glycerol-3-phosphate acyltransferase; EC=2.3.1.51; chromosome I CDS432197 762 + 0.402887
NA VF1738 3-oxoacyl-[acyl-carrier-protein] synthaseRecName: Full=3-oxoacyl-[acyl-carrier-protein] synthase 2; EC=2.3.1.179; chromosome I CDS1964701 1245 - 0.436948
NA VF1933 acyl-CoA dehydrogenase chromosome I CDS2168083 510 + 0.405882
NA VF1625 CDP-diacylglycerol--glycerol-3-phosphate3-phosph atidyltransferaseSubName: Full=Phosphatidylglycerophosphate synthetase; EC=2.7.8.5; chromosome I CDS1828585 555 - 0.4
NA VF0860 3-oxoacyl-[acyl-carrier-protein] synthaseSubName: Full=3-oxoacyl-(Acyl carrier protein) synthase; EC=2.3.1.41; chromosome I CDS946083 1236 + 0.424757
NA VF1739 acyl carrier proteinRecName: Full=Acyl carrier protein; Short=ACP; chromosome I CDS1966037 234 - 0.405983
NA VF0858 putative beta-hydroxydecanoyl-ACP dehydraseSubName: Full=Predicted 3-hydroxylacyl-(Acyl carrier protein) dehydratase; chromosome I CDS944871 471 + 0.41189
NA VF0849 AMP-(fatty)acid ligasesSubName: Full=AMP-(Fatty)acid ligase; chromosome I CDS934573 1404 + 0.400285
NA VF2383 acetyl-coenzyme A synthetase chromosome I CDS2680037 1266 + 0.442338
NA VF1258 acyl-CoA hydrolaseSubName: Full=Acyl-CoA hydrolase; EC=3.1.2.20; chromosome I CDS1404110 411 + 0.394161
NA VF0711 1-deoxy-D-xylulose 5-phosphate synthaseRecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; EC=2.2.1.7; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS; chromosome I CDS778295 1884 - 0.407113
NA VF1956 1-deoxy-D-xylulose 5-phosphate reductoisomeraseRecName: Full=1-deoxy-D-xylulose 5-phosphate reductoisomerase; Short=DXP reductoisomerase; EC=1.1.1.267; AltName: Full=1-deoxyxylulose-5-phosphate reductoisomerase; AltName: Full=2-C-methyl-D-erythritol 4-phosphate synthase; chromosome I CDS2192170 1203 - 0.41064
NA VF1810 enoyl-CoA hydrataseRecName: Full=Fatty acid oxidation complex subunit alpha; Includes: RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA epimerase; EC=4.2.1.17; EC=5.1.2.3; Includes: RecName: Full=3-hydroxyacyl-CoA dehydrogenase; EC=1.1.1.35; chromosome I CDS2047024 2100 - 0.398571
NA VF0970 cell-cell signaling protein, C-factorSubName: Full=C factor cell-cell signaling protein; chromosome I CDS1064629 711 + 0.365682
NA VF0024 3-ketoacyl-CoA thiolaseRecName: Full=3-ketoacyl-CoA thiolase; EC=2.3.1.16; AltName: Full=Acetyl-CoA acyltransferase; AltName: Full=Beta-ketothiolase; AltName: Full=Fatty acid oxidation complex subunit beta; chromosome I CDS25396 1230 - 0.436585
NA VF0850 AMP-(fatty)acid ligasesSubName: Full=AMP-(Fatty)acid ligase; chromosome I CDS935990 375 + 0.370667
NA VF1024 acyl-CoA hydrolaseSubName: Full=Predicted hydrolase; EC=3.1.2.20; chromosome I CDS1131790 432 - 0.409722
NA VF0865 cardiolipin synthetaseSubName: Full=Predicted hydrolase; EC=2.7.8.-; chromosome I CDS950937 1548 + 0.407623
NA VF0148 posttranslational flagellin modification protein ASubName: Full=Post-translational flagellin modification protein A; EC=1.1.1.250; chromosome I CDS167041 771 + 0.35668
NA VF1541 phosphohydrolase (MutT/nudix family protein)SubName: Full=Phosphohydrolase (MutT/nudix family protein); chromosome I CDS1727232 1473 - 0.355058
NA VF1292 3-hydroxydecanoyl-[acyl-carrier-protein]dehydrat aseRecName: Full=3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase; EC=4.2.1.59; AltName: Full=3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA; AltName: Full=Beta-hydroxydecanoyl thioester dehydrase; AltName: Full=Trans-2-decenoyl-[acyl-carrier-protein] isomerase; EC=5.3.3.14; chromosome I CDS1445552 519 - 0.427746
NA VF0919 hypothetical proteinSubName: Full=Oxidoreductase, short-chain dehydrogenase/reductase family; chromosome I CDS1015595 672 - 0.360119
NA VF1700 3-oxoacyl-[acyl-carrier-protein] synthaseSubName: Full=3-oxoacyl-(Acyl-carrier-protein)-synthase; EC=2.3.1.41; chromosome I CDS1919027 1212 - 0.443069
NA VF1665 macrolide-efflux proteinSubName: Full=1-acyl-sn-glycerol-3-phosphate acyltransferase; EC=2.3.1.51; chromosome I CDS1876769 1869 + 0.392188
NA VFA0094 CDP-diacylglycerol--glycerol-3-phosphate3-phosph atidyltransferaseSubName: Full=Predicted phosphatidyl transferase, inner membrane protein; EC=2.7.8.5; chromosome II CDS105612 609 - 0.399015
NA VF1743 fatty acid/phospholipid synthesis protein PlsXRecName: Full=Phosphate acyltransferase; EC=2.3.1.n2; AltName: Full=Acyl-ACP phosphotransacylase; AltName: Full=Acyl-[acyl-carrier-protein]--phosphate acyltransferase; AltName: Full=Phosphate-acyl-ACP acyltransferase; chromosome I CDS1969144 1026 - 0.416179
NA VFA0997 2-deoxy-D-gluconate 3-dehydrogenaseSubName: Full=2-deoxy-D-gluconate 3-dehydrogenase; EC=1.1.1.125; chromosome II CDS1123095 756 - 0.421958
NA VFA0699 nodulation protein NSubName: Full=Nodulation protein N, MaoC-like domain; chromosome II CDS775891 684 - 0.407895
NA VF1039 short chain dehydrogenaseSubName: Full=Predicted oxoacyl-(Acyl carrier protein) reductase, EmrKY-TolC system; chromosome I CDS1148332 741 - 0.411606
NA VF1932 acyl-CoA dehydrogenase chromosome I CDS2166144 1980 + 0.413131
NA VF2001 conserved hypothetical proteinSubName: Full=Conserved protein; chromosome I CDS2241819 438 - 0.381279
NA VF1708 long-chain-fatty-acid--CoA ligaseSubName: Full=Acyl-CoA synthetase (Long-chain-fatty-acid--CoA ligase); EC=6.2.1.3; chromosome I CDS1927069 1683 - 0.407011
NA VF0843 hypothetical proteinSubName: Full=Lipoprotein, putative; chromosome I CDS931283 576 - 0.333333
NA VF1543 long-chain fatty acid transport protein precursorSubName: Full=Long-chain fatty acid transport protein; chromosome I CDS1729304 1344 - 0.36756
NA VF1544 phosphatidylglycerophosphatase B homologSubName: Full=Phosphatidylglycerophosphatase B-like protein; chromosome I CDS1731048 675 + 0.373333
NA VF1658 short chain dehydrogenaseSubName: Full=Short chain dehydrogenase; chromosome I CDS1872831 693 + 0.383838
NA VF1740 3-oxoacyl-[acyl-carrier protein] reductaseSubName: Full=3-oxoacyl-(Acyl-carrier-protein) reductase; EC=1.1.1.100; chromosome I CDS1966440 738 - 0.439024
NA VF2443 glycerol-3-phosphate acyltransferaseRecName: Full=Glycerol-3-phosphate acyltransferase; Short=GPAT; EC=2.3.1.15; chromosome I CDS2751203 2424 + 0.388614
NA VFA0089 hypothetical hydrolase/lipaseSubName: Full=Hypothetical hydrolase/lipase; chromosome II CDS97118 972 + 0.378601
NA VF0025 enoyl-CoA hydrataseRecName: Full=Fatty acid oxidation complex subunit alpha; Includes: RecName: Full=Enoyl-CoA hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA isomerase/3-hydroxybutyryl-CoA epimerase; EC=4.2.1.17; EC=5.1.2.3; EC=5.3.3.8; Includes: RecName: Full=3-hydroxyacyl-CoA dehydrogenase; EC=1.1.1.35; chromosome I CDS26573 2178 - 0.416437