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2024-05-07 09:03:54

Gene list

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COG category: Lipid transport and metabolism
Organism: Erwinia carotovora subsp. atroseptica SCRI1043, SCRI1043

Number of genes found: 116

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Erwinia carotovora subsp. atroseptica SCRI1043, SCRI1043
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA ECA2925 probable short chain dehydrogenasechromosome CDS3268214 759 + 0.561265
NA ECA1209 probable short chain dehydrogenasechromosome CDS1376426 888 + 0.552928
NA ECA4494 putative beta-ketoacyl synthasechromosome CDS5035063 1158 - 0.541451
NA ECA4503 putative acyl carrier proteinchromosome CDS5044136 252 - 0.428571
NA ECA1917 putative allophanate hydrolasechromosome CDS2171266 3603 + 0.576742
NA ECA4327 putative oxidoreductasechromosome CDS4844257 915 + 0.575956
NA ECA0430 putative exported proteinchromosome CDS490305 831 + 0.493381
NA ECA2695 putative malonyl CoA-acyl carrier protein transacylasechromosome CDS3031133 918 - 0.543573
NA ECA2027 putative acyltransferasechromosome CDS2304023 1275 - 0.524706
NA ECA4504 putative acyl carrier proteinchromosome CDS5044405 267 - 0.426966
NA ECA3558 short chain dehydrogenasechromosome CDS3989266 747 + 0.54083
NA ECA3830 putative AMP-binding proteinchromosome CDS4279945 1806 - 0.527685
NA ECA4491 putative beta-ketoacyl-ACP synthasechromosome CDS5032592 1227 - 0.552567
NA ECA1090 putative lipoproteinchromosome CDS1218826 1194 - 0.524288
NA ECA3214 probable short chain dehydrogenasechromosome CDS3596586 756 + 0.511905
NA ECA3667 putative lipoproteinchromosome CDS4117795 330 + 0.430303
NA ECA0114 putative membrane proteinchromosome CDS133860 1116 + 0.539427
NA ECA2734 putative membrane-bound phosphatasechromosome CDS3074117 702 + 0.472934
NA ECA0113 putative membrane proteinchromosome CDS133202 654 + 0.550459
NA ECA3079 putative 3-ketoacyl-CoA thiolasechromosome CDS3438547 1314 - 0.581431
NA ECA0915 putative exported proteinchromosome CDS1020917 966 - 0.482402
NA ECA3078 putative fatty acid oxidation complex alpha subunitchromosome CDS3436355 2196 - 0.533698
NA ECA0747 putative short chain dehydrogenasechromosome CDS818265 741 + 0.578947
NA ECA0109 conserved hypothetical proteinchromosome CDS129082 1017 + 0.54179
NA ECA3194 putative diacylglycerol kinasechromosome CDS3575248 900 + 0.57
NA ECA2062 putative phosphatasechromosome CDS2348945 1308 - 0.550459
NA ECA0116 putative fatty acid desaturasechromosome CDS136117 1092 + 0.516484
NA ECA2789 putative isopentenyl-diphosphate delta-isomerasechromosome CDS3129173 540 - 0.494444
NA ECA0723 putative sterol transferasechromosome CDS792815 525 + 0.52
NA ECA4492 3-oxoacyl-[acyl-carrier protein] reductasechromosome CDS5033818 732 - 0.516393
NA ECA2058 probable short-chain dehydrogenasechromosome CDS2343795 735 + 0.557823
NA ECA2704 putative phenazine antibiotic biosynthesis proteinchromosome CDS3039428 780 - 0.480769
NA ECA1221 probable short chain dehydrogenasechromosome CDS1390635 771 - 0.577173
NA ECA0837 conserved hypothetical proteinchromosome CDS927996 447 + 0.498881
NA ECA2142 urea amidolyasechromosome CDS2442388 3615 + 0.592808
NA ECA4493 putative beta-hydroxydecanoyl-ACP dehydrasechromosome CDS5034588 483 - 0.536232
NA ECA1592 putative acetyl-hydrolasechromosome CDS1848239 903 - 0.585825
NA ECA2018 probable short-chain dehydrogenasechromosome CDS2290679 723 - 0.536653
NA ECA0413 hypothetical proteinchromosome CDS469396 3489 - 0.327028
NA ECA0489 putative 2-hydroxy-3-oxopropionate reductasechromosome CDS565471 894 + 0.535794
NA ECA4482 conserved hypothetical proteinchromosome CDS5024880 408 - 0.477941
NA ECA2928 3-oxoacyl-[acyl-carrier-protein] synthase IIchromosome CDS3270545 1290 - 0.56124
NA ECA4501 putative AMP-binding enzymechromosome CDS5042193 1356 - 0.536873
NA ECA1208 probable short chain dehydrogenasechromosome CDS1375437 882 + 0.555556
NA ECA4500 conserved hypothetical proteinchromosome CDS5041817 390 - 0.510256
NA ECA4505 putative acyltransferasechromosome CDS5044691 789 - 0.506971
NA ECA0115 putative fatty acid desaturasechromosome CDS134972 1146 + 0.516579
NA ECA1979 probable short-chain dehydrogenasechromosome CDS2246565 834 + 0.533573
NA ECA0925 putative phospholipasechromosome CDS1033383 1335 - 0.548315
NA ECA4053 putative short chain dehydrogenasechromosome CDS4518864 780 + 0.544872
NA ECA2314 putative acyl-CoA thioester hydrolasechromosome CDS2620019 423 + 0.539007
NA ECA1678 hypothetical proteinchromosome CDS1925154 333 - 0.378378
NA ECA1586 probable short chain dehydrogenasechromosome CDS1840176 759 + 0.562582
NA ECA3127 acyl carrier proteinchromosome CDS3493259 222 - 0.504505
NA ECA2215 putative short-chain dehydrogenasechromosome CDS2515094 708 - 0.556497
NA ECA0522 conserved hypothetical proteinchromosome CDS596187 615 + 0.458537
NA ECA3767 probable short-chain dehydrogenasechromosome CDS4207998 690 + 0.597101
NA ECA2289 putative short chain dehydrogenasechromosome CDS2595189 762 + 0.534121
NA ECA2839 putative diacylglycerol kinasechromosome CDS3181565 924 - 0.547619
aas ECA3641 Aas bifunctional protein [includes: 2-acylglycerophosphoethanolamine acyltransferase; acyl-acyl carrier protein synthetase]chromosome CDS4088109 2217 - 0.556157
accA ECA1047 acetyl-coenzyme A carboxylase carboxyl transferase subunit alphachromosome CDS1173165 960 + 0.534375
accB ECA0261 biotin carboxyl carrier protein of acetyl-CoA carboxylasechromosome CDS306645 468 - 0.534188
accC ECA0260 biotin carboxylasechromosome CDS305290 1344 - 0.530506
accD ECA3056 acetyl-coenzyme A carboxylase carboxyl transferase beta subunitchromosome CDS3412631 918 - 0.527233
acpD ECA2005 acyl carrier protein phosphodiesterasechromosome CDS2274685 606 - 0.534653
acpP ECA1798 acyl carrier proteinchromosome CDS2044934 237 + 0.434599
acpS ECA3274 holo-[acyl-carrier protein] synthasechromosome CDS3679845 381 - 0.519685
atoA ECA1283 acetate CoA-transferase beta subunitchromosome CDS1458447 648 - 0.554012
atoB ECA1282 acetyl-CoA acetyltransferasechromosome CDS1457257 1179 - 0.577608
atoD ECA1284 acetate CoA-transferase alpha subunitchromosome CDS1459094 657 - 0.474886
budC ECA0310 acetoin reductasechromosome CDS354581 774 - 0.520672
cdh ECA1560 CDP-diacylglycerol pyrophosphatasechromosome CDS1817266 759 - 0.520422
cdsA ECA1037 phosphatidate cytidylyltransferasechromosome CDS1160091 858 + 0.516317
cfa1 ECA0608 Cfa-acyl carrier proteinchromosome CDS679742 276 - 0.365942
cfa2 ECA0607 coronafacic acid dehydratasechromosome CDS679248 498 - 0.423695
cfa3 ECA0606 Cfa-beta-ketoacylsynthasechromosome CDS678109 1146 - 0.487784
cfa5 ECA0604 coronafacic acid synthetase, ligase componentchromosome CDS676143 1440 - 0.516667
cfl ECA0609 coronafacate ligasechromosome CDS680119 1563 - 0.357646
citX ECA2570 apo-citrate lyase phosphoribosyl-dephospho-CoA transferasechromosome CDS2900693 528 - 0.570076
cls ECA2318 cardiolipin synthetasechromosome CDS2624113 1461 + 0.532512
dxr ECA1035 1-deoxy-D-xylulose 5-phosphate reductoisomerasechromosome CDS1157925 1197 + 0.512114
dxs ECA1131 1-deoxy-D-xylulose 5-phosphate synthasechromosome CDS1282733 1866 - 0.530547
entA ECA0481 enterobactin synthetase component A (2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase)chromosome CDS550604 786 + 0.599237
fabA ECA1748 3-hydroxydecanoyl-[acyl-carrier-protein]dehydrat asechromosome CDS1997423 519 - 0.508671
fabB ECA3063 3-oxoacyl-[acyl-carrier-protein] synthase Ichromosome CDS3420405 1218 - 0.529557
fabD ECA1796 malonyl CoA-acyl carrier protein transacylasechromosome CDS2043101 930 + 0.523656
fabF ECA1799 3-oxoacyl-[acyl-carrier-protein] synthase IIchromosome CDS2045253 1242 + 0.529791
fabG ECA1797 3-oxoacyl-[acyl-carrier protein] reductasechromosome CDS2044045 735 + 0.487075
fabH ECA1795 3-oxoacyl-[acyl-carrier-protein] synthase IIIchromosome CDS2042130 954 + 0.508386
fabI ECA1972 enoyl-[acyl-carrier-protein] reductase [NADH]chromosome CDS2239125 789 - 0.537389
fabZ ECA1042 (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratasechromosome CDS1166572 456 + 0.497807
fadA ECA0207 3-ketoacyl-CoA thiolasechromosome CDS232686 1164 - 0.559278
fadB ECA0208 fatty oxidation complex alpha subunit [includes: enoyl-CoA hydratase; delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase; 3-hydroxyacyl-CoA dehydrogenasechromosome CDS233861 2190 - 0.53242
fadD ECA2372 long-chain-fatty-acid--CoA ligasechromosome CDS2681736 1686 - 0.514828
fadE ECA3474 acyl-coenzyme A dehydrogenasechromosome CDS3894156 2448 + 0.569444
fadL ECA3081 long-chain fatty acid transport proteinchromosome CDS3440778 1287 + 0.511267
garR ECA3573 2-hydroxy-3-oxopropionate reductasechromosome CDS4012813 885 - 0.542373
ispD ECA3535 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferasechromosome CDS3963091 714 - 0.532213
ispE ECA2187 4-diphosphocytidyl-2-C-methyl-D-erythritolkinasechromosome CDS2489870 873 - 0.510882
ispF ECA3534 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthasechromosome CDS3962555 498 - 0.536145
ispG ECA3220 1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphate synthasechromosome CDS3603367 1122 - 0.520499
ispH ECA3873 IspH protein (1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase)chromosome CDS4333452 951 - 0.500526
kduD ECA2401 2-keto-3-deoxygluconate oxidoreductasechromosome CDS2712101 762 + 0.507874
menE ECA1215 O-succinylbenzoic acid--CoA ligasechromosome CDS1383651 1431 + 0.575122
paeX ECA2408 pectin acetylesterasechromosome CDS2720363 963 + 0.538941
pgpA ECA1130 phosphatidylglycerophosphatase Achromosome CDS1282175 507 + 0.524655
pgpB ECA1944 phosphatidylglycerophosphatase Bchromosome CDS2203741 777 + 0.53668
pgsA ECA2880 CDP-diacylglycerol--glycerol-3-phosphate3-phosph atidyltransferasechromosome CDS3228035 549 - 0.495446
pldB ECA4169 lysophospholipase L2chromosome CDS4659695 1038 - 0.546243
plsB ECA0628 glycerol-3-phosphate acyltransferasechromosome CDS700978 2478 - 0.523406
plsC ECA0346 1-acyl-sn-glycerol-3-phosphate acyltransferasechromosome CDS394956 738 + 0.48374
plsX ECA1794 fatty acid/phospholipid synthesis proteinchromosome CDS2041077 1047 + 0.509074
psd ECA3966 phosphatidylserine decarboxylase proenzymechromosome CDS4436846 1026 + 0.551657
pssA ECA3520 CDP-diacylglycerol--serineO-phosphatidyltransferasechromosome CDS3942520 1359 + 0.479765
tesB ECA1162 acyl-CoA thioesterasechromosome CDS1318319 864 - 0.53125
uppS ECA1036 undecaprenyl pyrophosphate synthetasechromosome CDS1159320 762 + 0.505249