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2024-05-02 22:06:22

Gene list

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COG category: Lipid transport and metabolism
Organism: Photorhabdus luminescens subsp. laumondii TTO1, TTO1

Number of genes found: 123

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Photorhabdus luminescens subsp. laumondii TTO1, TTO1
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA plu2217 chromosome CDS2605416 1266 + 0.42496
NA plu1463 chromosome CDS1755593 915 + 0.409836
NA plu4677 chromosome CDS5453641 816 + 0.406863
NA plu4510 chromosome CDS5269014 1587 + 0.47511
NA plu4306 chromosome CDS5030075 1779 + 0.461495
NA plu1516 chromosome CDS1815904 1119 - 0.34227
NA plu3377 chromosome CDS4004937 435 - 0.432184
NA plu4189 chromosome CDS4903075 249 - 0.333333
NA plu4188 chromosome CDS4901504 1548 - 0.347545
NA plu0762 chromosome CDS881414 1080 - 0.411111
NA plu2507 chromosome CDS2951054 906 + 0.463576
NA plu4776 chromosome CDS5557848 642 - 0.409657
NA plu4387 chromosome CDS5123982 1047 - 0.371538
NA plu0144 chromosome CDS151310 780 + 0.524359
NA plu4675 chromosome CDS5451987 237 + 0.337553
NA plu2165 chromosome CDS2550941 243 + 0.386831
NA plu0998 chromosome CDS1183567 294 + 0.404762
NA plu4777 chromosome CDS5558482 675 - 0.431111
NA plu0116 chromosome CDS120452 1194 + 0.339196
NA plu1518 chromosome CDS1818932 1119 - 0.370867
NA plu1206 chromosome CDS1388693 381 - 0.278215
NA plu1192 chromosome CDS1374488 2436 - 0.490558
NA plu3135 chromosome CDS3694556 1611 - 0.402855
NA plu3819 chromosome CDS4487463 786 + 0.455471
NA plu4191 chromosome CDS4904466 1287 - 0.425019
NA plu1519 chromosome CDS1820645 1125 - 0.349333
NA plu4844 chromosome CDS5617384 1062 + 0.396422
NA plu2336 chromosome CDS2751654 1764 - 0.353741
NA plu3200 chromosome CDS3764441 2232 - 0.447581
NA plu3987 chromosome CDS4673150 534 - 0.389513
NA plu2197 chromosome CDS2583890 1188 + 0.449495
NA plu0977 chromosome CDS1160183 747 - 0.457831
NA plu2219 chromosome CDS2607476 246 + 0.292683
NA plu3004 chromosome CDS3505519 117 + 0.384615
NA plu2075 chromosome CDS2458486 693 + 0.401154
NA plu0143 chromosome CDS150450 864 + 0.52662
NA plu4678 chromosome CDS5454513 744 + 0.435484
NA plu2863 chromosome CDS3398149 705 + 0.394326
NA plu4187 chromosome CDS4900062 1443 - 0.328482
NA plu2164 chromosome CDS2549713 1149 + 0.415144
NA plu4505 chromosome CDS5260730 243 - 0.37037
NA plu2766 chromosome CDS3277801 1239 - 0.369653
NA plu1082 chromosome CDS1253840 924 + 0.545455
NA plu2450 chromosome CDS2877523 765 + 0.469281
NA plu0760 chromosome CDS878406 1578 - 0.345374
NA plu1441 chromosome CDS1732685 2463 + 0.416971
NA plu0753 chromosome CDS868642 939 - 0.383387
NA plu4676 chromosome CDS5452379 1266 + 0.456556
NA plu4194 chromosome CDS4907928 777 - 0.406692
NA plu0830 chromosome CDS961486 1299 + 0.535027
NA plu0757 chromosome CDS873354 948 - 0.397679
NA plu2484 chromosome CDS2925141 432 + 0.453704
NA plu4507 chromosome CDS5262558 2502 + 0.455635
NA plu4190 chromosome CDS4903358 1116 - 0.396953
NA plu1971 chromosome CDS2344968 1722 - 0.380372
NA plu1579 chromosome CDS1888106 609 - 0.440066
NA plu4511 chromosome CDS5270597 624 + 0.410256
NA plu0765 chromosome CDS884051 264 - 0.32197
NA plu1541 chromosome CDS1843750 747 - 0.460509
NA plu4563 chromosome CDS5326772 1311 - 0.357742
NA plu1460 chromosome CDS1753139 903 + 0.415282
NA plu3201 chromosome CDS3766624 1311 - 0.481312
NA plu0890 chromosome CDS1016619 468 + 0.352564
NA plu4512 chromosome CDS5271210 543 + 0.405157
NA plu3365 chromosome CDS3993323 531 - 0.3371
NA plu2798 chromosome CDS3324441 765 + 0.426144
NA plu1207 chromosome CDS1389131 402 - 0.258706
NA plu2266 chromosome CDS2663260 921 + 0.445168
NA plu0159 chromosome CDS164775 1011 + 0.375865
NA plu2614 chromosome CDS3058222 852 - 0.449531
NA plu2344 chromosome CDS2761480 771 - 0.516213
NA plu0146 chromosome CDS153208 1212 + 0.55033
aas plu1246 2-acylglycerophosphoethanolamine acyl transferase/acyl carrier protein synthasechromosome CDS1440383 1920 + 0.41875
accA plu0688 acetyl-CoA carboxylase alpha subunitchromosome CDS791130 960 + 0.446875
accB plu4074 biotin carboxyl carrier protein of acetyl-CoA carboxylase (BCCP)chromosome CDS4759325 471 + 0.471338
accC plu4075 biotin carboxylase (A subunit of acetyl-CoA carboxylase) (ACC)chromosome CDS4759808 1350 + 0.457778
accD plu3171 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta (ACCase beta chain)chromosome CDS3731309 945 - 0.45291
acpD plu2149 acyl carrier protein phosphodiesterase (ACP phosphodiesterase)chromosome CDS2531711 603 - 0.454395
acpP plu2832 acyl carrier protein (cytosolic activating factor) (CAF)chromosome CDS3362880 237 - 0.396624
acpS plu3336 Holo-[acyl-carrier protein] synthase (Holo-ACP synthase)chromosome CDS3964479 381 - 0.496063
acs plu0074 acetyl-coenzyme A synthetase (acetate--COA ligase) (acyl-activating enzyme)chromosome CDS71302 1956 - 0.443252
atoA plu3800 acetate CoA-transferase beta subunit (acetyl-CoA:acetoacetate CoA transferase beta subunit)chromosome CDS4465047 660 + 0.474242
atoD plu3799 acetate CoA-transferase alpha subunit (acetyl-CoA:acetoacetate CoA transferase alpha subunit)chromosome CDS4464385 660 + 0.477273
cdsA plu0678 phosphatidate cytidylyltransferasechromosome CDS778094 849 + 0.441696
cls plu2487 Cardiolipin synthetase (cardiolipin synthase) (CL synthase)chromosome CDS2926962 1470 + 0.442177
cpmB plu0183 CpmB protein involved in carbapenem biosynthesischromosome CDS193944 750 + 0.3
crtB plu4343 phytoene synthasechromosome CDS5071597 927 + 0.488673
dltC plu4381 D-alanine carrier protein DltCchromosome CDS5115942 225 + 0.328889
dxr plu0676 1-deoxy-D-xylulose 5-phosphate reductoisomerasechromosome CDS775909 1197 + 0.427736
dxs plu3887 1-deoxy-D-xylulose 5-phosphate synthase (1-deoxyxylulose-5-phosphate synthase) (DXP synthase) (DXPS)chromosome CDS4563031 1866 + 0.450161
entA plu2727 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase, enterochelin biosynthesischromosome CDS3234194 747 - 0.420348
fabA plu1772 D-3-hydroxydecanoyl-(acyl carrier-protein) dehydratasechromosome CDS2114650 519 - 0.445087
fabB plu3184 3-oxoacyl-[acyl-carrier-protein] synthase I (beta-ketoacyl-ACP synthase I) (KAS I)chromosome CDS3745826 1215 - 0.454321
fabD plu2834 malonyl CoA-acyl carrier protein transacylase (MCT)chromosome CDS3364013 933 - 0.450161
fabF plu2831 3-oxoacyl-[acyl-carrier-protein] synthase IIchromosome CDS3361556 1251 - 0.471623
fabG plu2833 3-oxoacyl-[acyl-carrier-protein] reductasechromosome CDS3363271 735 - 0.461224
fabH plu2835 3-oxoacyl-[acyl carrier-protein] synthase III (beta-ketoacyl-ACP synthase III) (KAS III)chromosome CDS3364970 954 - 0.428721
fabI plu2592 Enoyl-[acyl-carrier-protein] reductase [NADH] (NADH-dependent enoyl-ACP reductase)chromosome CDS3034569 789 + 0.47275
fabZ plu0683 (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase ((3R)-hydroxymyristoyl ACP dehydrase) (17 kDa actomyosincomponent)chromosome CDS784557 453 + 0.450331
fadA plu4403 3-ketoacyl-CoA thiolase (fatty oxidation complex beta subunit) (beta-ketothiolase) (acetyl-CoA acyltransferase)chromosome CDS5151577 1167 + 0.482434
fadB plu4402 Fatty oxidation complex alpha subunit [includes: enoyl-CoA hydratase; delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase; 3-hydroxyacyl-CoA dehydrogenasechromosome CDS5149379 2187 + 0.440329
fadD plu2134 long-chain-fatty-acid--CoA ligase (long-chain acyl-CoA synthetase)chromosome CDS2517873 1683 + 0.427213
fadD plu3671 long-chain-fatty-acid--CoA ligase (long-chain acyl-CoA synthetase) (LACS)chromosome CDS4321677 1803 - 0.414309
fadL plu3202 Long-chain fatty acid transport protein precursor (outer membrane FadL protein)chromosome CDS3768513 1344 + 0.446429
gcpE plu1376 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (GcpE protein) (Protein E)chromosome CDS1655198 1122 + 0.459893
hcaB plu2207 2,3-dihydroxy-2,3-dihydrophenylpropionatedehydro genasechromosome CDS2594591 843 + 0.475682
ispD plu0713 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (MEP citydylyltransferase) (MCT)chromosome CDS821805 732 + 0.441257
ispE plu2067 4-diphosphocytidyl-2C-methyl-D-erythritol kinasechromosome CDS2448992 876 - 0.479452
ispF plu0714 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (MECPS)chromosome CDS822550 474 + 0.459916
lip-1 plu3510 lipase 1 precursor (triacylglycerol lipase)chromosome CDS4101200 1950 - 0.433846
lytB plu0594 penicillin tolerance proteinchromosome CDS675735 954 + 0.451782
menE plu3069 O-succinylbenzoic acid--CoA ligase (OSB-CoA synthetase) (O-succinylbenzoate-CoA synthase)chromosome CDS3577479 1401 - 0.452534
pgpA plu3895 phosphatidylglycerophosphatase Achromosome CDS4568269 492 - 0.434959
pgsA plu2026 phosphatidylglycerophosphate synthetase (CDP-1,2-diacyl-sn-glycero-3-phosphate phosphatidyl transferase)chromosome CDS2396418 549 - 0.444444
pldB plu4619 Lysophospholipase L2 (Lecithinase B)chromosome CDS5382246 999 - 0.407407
plsB plu4376 glycerol-3-phosphate acyltransferase (GPAT)chromosome CDS5107431 2457 + 0.48026
plsC plu3948 1-acyl-sn-glycerol-3-phosphate acyltransferase (1-AGP acyltransferase) (1-AGPAT) (Lysophosphatidic acid acyltransferase) (LPAAT)chromosome CDS4633298 729 - 0.436214
plsX plu2836 Fatty acid/phospholipid synthesis protein PlsXchromosome CDS3365930 1038 - 0.460501
prpE plu3539 Propionate--CoA ligase (Propionyl-CoA synthetase)chromosome CDS4168817 1887 - 0.471118
psd plu4597 phosphatidylserine decarboxylase proenzymechromosome CDS5361961 894 + 0.45302
pssA plu1271 CDP-diacylglycerol--serine O-phosphatidyltransferase (phosphatidylserine synthase)chromosome CDS1478486 1359 - 0.399558
tesB plu3855 acyl-CoA thioesterase II (TEII)chromosome CDS4528851 864 + 0.429398
uppS plu0677 undecaprenyl pyrophosphate synthetasechromosome CDS777320 765 + 0.398693