Gene list
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COG category: Lipid transport and metabolism
Organism: Bordetella pertussis, Tohama I
Number of genes found: 176
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Bordetella pertussis, Tohama I | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | BP3246 | putative fatty acid CoA ligase | chromosome | CDS | 3464174 | 1632 | + | 0.727328 |
NA | BP0029 | putative enoyl-CoA hydratase | chromosome | CDS | 32215 | 792 | + | 0.666667 |
NA | BP1446 | enoly-CoA hydratase | chromosome | CDS | 1520417 | 1173 | + | 0.706735 |
NA | BP0653 | probable acyl-CoA dehydrogenase | chromosome | CDS | 661009 | 1191 | - | 0.668346 |
NA | BP0930 | putative CoA ligase | chromosome | CDS | 967344 | 1659 | - | 0.673297 |
NA | BP2770 | probable short-chain dehydrogenase | chromosome | CDS | 2945886 | 759 | + | 0.683794 |
NA | BP0422 | probable thiolase | chromosome | CDS | 423071 | 1194 | + | 0.726131 |
NA | BP1220 | putative phytoene synthase | chromosome | CDS | 1282971 | 831 | - | 0.684717 |
NA | BP1099 | putative long-chain fatty-acid--CoA ligase | chromosome | CDS | 1148447 | 1866 | + | 0.690782 |
NA | BP3092 | putative phospholipase D protein | chromosome | CDS | 3292425 | 1575 | + | 0.713651 |
NA | BP1936 | conserved hypothetical protein | chromosome | CDS | 2039026 | 477 | - | 0.689727 |
NA | BP2854 | probable short chain dehydrogenase | chromosome | CDS | 3030795 | 750 | - | 0.698667 |
NA | BP0417 | probable enoyl-CoA hydratase | chromosome | CDS | 417841 | 786 | + | 0.706107 |
NA | BP0144 | putative lipase | chromosome | CDS | 144874 | 933 | - | 0.732047 |
NA | BP3201 | putative hydratase | chromosome | CDS | 3412334 | 864 | + | 0.737269 |
NA | BP3191 | putative acyl-CoA dehyrdogenase | chromosome | CDS | 3403221 | 1164 | - | 0.703608 |
NA | BP0217 | 3-hydroxybutyryl-CoA dehydrogenase | chromosome | CDS | 226857 | 933 | + | 0.673098 |
NA | BP0332 | conserved hypothetical protein | chromosome | CDS | 334989 | 1197 | - | 0.705096 |
NA | BP1917 | putative 3-hydroxyacyl-CoA dehydrogenase | chromosome | CDS | 2019771 | 942 | + | 0.70913 |
NA | BP1005 | conserved hypothetical protein | chromosome | CDS | 1050928 | 2349 | - | 0.704981 |
NA | BP2550 | putative enoyl-CoA hydratase | chromosome | CDS | 2703821 | 795 | - | 0.665409 |
NA | BP3844 | putative enoyl-CoA hydratase/isomerase | chromosome | CDS | 4054669 | 825 | + | 0.647273 |
NA | BP0026 | putative thiolase | chromosome | CDS | 29142 | 1227 | - | 0.630807 |
NA | BP2340 | putative acyl-CoA dehydrogenase | chromosome | CDS | 2479188 | 1659 | - | 0.732369 |
NA | BP0778 | putative acetyl-CoA synthetase | chromosome | CDS | 799705 | 1533 | - | 0.711024 |
NA | BP2093 | enoyl-CoA hydratase/isomerase-like protein | chromosome | CDS | 2215301 | 813 | + | 0.698647 |
NA | BP1784 | putative thiolase | chromosome | CDS | 1874597 | 1158 | + | 0.707254 |
NA | BP3542 | putative short chain dehydrogenase | chromosome | CDS | 3754262 | 726 | - | 0.69146 |
NA | BP1758 | probable fatty acid desaturase | chromosome | CDS | 1845161 | 1209 | + | 0.639371 |
NA | BP3308 | putative acyl-CoA dehydrogenase | chromosome | CDS | 3527320 | 1149 | + | 0.680592 |
NA | BP0300 | putative esterase | chromosome | CDS | 304724 | 891 | - | 0.691358 |
NA | BP2100 | conserved hypothetical protein | chromosome | CDS | 2221839 | 1488 | - | 0.739919 |
NA | BP1219 | putative phytoene synthase | chromosome | CDS | 1282106 | 864 | - | 0.675926 |
NA | BP1132 | probable short-chain dehydrogenase | chromosome | CDS | 1195664 | 723 | - | 0.709544 |
NA | BP1222 | probable short-chain dehydrogenase | chromosome | CDS | 1285209 | 717 | + | 0.670851 |
NA | BP0669 | probable enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase, bifunctional enzyme | chromosome | CDS | 679875 | 2118 | - | 0.6983 |
NA | BP1443 | conserved hypothetical protein | chromosome | CDS | 1518295 | 435 | + | 0.618391 |
NA | BP3053 | putative oxidoreductase | chromosome | CDS | 3253256 | 834 | + | 0.688249 |
NA | BP0145 | putative enoyl-CoA hydratase/isomerase | chromosome | CDS | 145812 | 813 | - | 0.675277 |
NA | BP0447 | acetyl-CoA acetyltransferase | chromosome | CDS | 450353 | 1170 | + | 0.68547 |
NA | BP0430 | short-chain fatty acids transporter | chromosome | CDS | 431742 | 1464 | - | 0.659153 |
NA | BP0813 | probable short-chain dehydrogenase | chromosome | CDS | 837399 | 825 | - | 0.695758 |
NA | BP0711 | putative phospholipase | chromosome | CDS | 726180 | 1206 | + | 0.68408 |
NA | BP2063 | conserved hypothetical protein | chromosome | CDS | 2182893 | 807 | + | 0.731103 |
NA | BP3140 | hypothetical protein | chromosome | CDS | 3347439 | 573 | - | 0.755672 |
NA | BP2991 | acyl carrier protein | chromosome | CDS | 3183474 | 240 | - | 0.608333 |
NA | BP3304 | putative enoyl-CoA hydratase | chromosome | CDS | 3523872 | 822 | + | 0.672749 |
NA | BP2400 | putative coenzyme A transferase subunit | chromosome | CDS | 2540921 | 654 | - | 0.626911 |
NA | BP1536 | conserved hypothetical protein | chromosome | CDS | 1609058 | 444 | + | 0.686937 |
NA | BP1581 | putative oxidoreductase | chromosome | CDS | 1659774 | 771 | + | 0.687419 |
NA | BP3488 | putative phosphatidylglycerophosphatase | chromosome | CDS | 3697972 | 507 | + | 0.664694 |
NA | BP3848 | putative enoyl-CoA hydratase/isomerase | chromosome | CDS | 4058196 | 780 | + | 0.676923 |
NA | BP0329 | putative coenzyme A ligase | chromosome | CDS | 331861 | 1680 | - | 0.700595 |
NA | BP1339 | probable phospholipase | chromosome | CDS | 1411030 | 1203 | - | 0.709061 |
NA | BP2094 | putative 3-oxoacyl-CoA or-ACP reductase | chromosome | CDS | 2216113 | 723 | + | 0.738589 |
NA | BP2870 | putative acid CoA ligase | chromosome | CDS | 3047535 | 1476 | + | 0.691057 |
NA | BP1923 | probable short chain dehydrogenase | chromosome | CDS | 2025137 | 768 | + | 0.723958 |
NA | BP0532 | putative substrate-CoA ligase | chromosome | CDS | 540858 | 1554 | + | 0.675676 |
NA | BP0836 | putative exported protein | chromosome | CDS | 866524 | 435 | - | 0.724138 |
NA | BP1163 | probable short-chain dehydrogenase | chromosome | CDS | 1227984 | 780 | + | 0.738462 |
NA | BP0640 | probable acyl-CoA dehydrogenase | chromosome | CDS | 646789 | 1161 | + | 0.660637 |
NA | BP2409 | acetyl-coenzyme A synthetase | chromosome | CDS | 2549170 | 1980 | - | 0.668182 |
NA | BP0027 | MaoC family protein | chromosome | CDS | 30365 | 498 | - | 0.562249 |
NA | BP1668 | probable short-chain dehydrogenase | chromosome | CDS | 1754908 | 774 | - | 0.69509 |
NA | BP0670 | probable acyl-CoA dehydrogenase | chromosome | CDS | 682250 | 1803 | + | 0.673322 |
NA | BP0652 | probable acyl-CoA dehydrogenase | chromosome | CDS | 659865 | 1131 | - | 0.71618 |
NA | BP0218 | short-chain fatty acids transporter | chromosome | CDS | 227901 | 1350 | + | 0.635556 |
NA | BP3317 | putative enoyl-CoA hydratase/isomerase | chromosome | CDS | 3537575 | 726 | - | 0.702479 |
NA | BP0436 | conserved hypothetical protein | chromosome | CDS | 440544 | 495 | - | 0.666667 |
NA | BP0772 | putative acetoacetyl-CoA reductase | chromosome | CDS | 793122 | 753 | - | 0.717131 |
NA | BP0639 | conserved hypothetical protein | chromosome | CDS | 646386 | 393 | + | 0.689567 |
NA | BP0229 | beta-D-hydroxybutyrate dehydrogenase | chromosome | CDS | 236528 | 798 | - | 0.730576 |
NA | BP2557 | conserved hypothetical protein | chromosome | CDS | 2710132 | 1164 | - | 0.700172 |
NA | BP2841 | putative short-chain dehydrogenase | chromosome | CDS | 3017773 | 753 | + | 0.746348 |
NA | BP0624 | putative substrate-CoA ligase | chromosome | CDS | 631264 | 1494 | - | 0.687416 |
NA | BP0323 | acyltransferase | chromosome | CDS | 326810 | 741 | + | 0.68556 |
NA | BP1169 | putative oxidoreductase | chromosome | CDS | 1235767 | 918 | + | 0.713508 |
NA | BP0662 | probable enoyl-CoA hydratase | chromosome | CDS | 671780 | 780 | - | 0.673077 |
NA | BP3305 | putative enoyl-CoA hydratase/isomerase | chromosome | CDS | 3524773 | 738 | - | 0.737127 |
NA | BP0466 | alcohol dehydrogenase | chromosome | CDS | 476993 | 759 | + | 0.679842 |
NA | BP1937 | hypothetical protein | chromosome | CDS | 2039516 | 336 | - | 0.678571 |
NA | BP1671 | probable short chain dehydrogenase | chromosome | CDS | 1758077 | 690 | + | 0.708696 |
NA | BP0421 | putative acyl-CoA dehydrogenase | chromosome | CDS | 421977 | 1029 | + | 0.75413 |
NA | BP3277 | putative enoyl-CoA hydratase | chromosome | CDS | 3494683 | 828 | + | 0.654589 |
NA | BP0964 | probable acyl-CoA dehydrogenase | chromosome | CDS | 1001323 | 1827 | + | 0.680898 |
NA | BP2807 | putative thioesterase | chromosome | CDS | 2981700 | 411 | - | 0.666667 |
NA | BP2759 | putative thiolase | chromosome | CDS | 2935683 | 1206 | - | 0.695688 |
NA | BP2038 | putative hydroxlacyl-CoA dehydrogenase | chromosome | CDS | 2155475 | 948 | - | 0.714135 |
NA | BP2444 | putative fatty acid synthesis protein | chromosome | CDS | 2585843 | 1059 | - | 0.661001 |
NA | BP0668 | probable thiolase | chromosome | CDS | 678661 | 1185 | - | 0.691983 |
NA | BP2853 | probable short chain dehydrogenase | chromosome | CDS | 3029999 | 783 | - | 0.736909 |
NA | BP2225 | putative phospholipase | chromosome | CDS | 2351304 | 1458 | + | 0.674897 |
NA | BP1445 | probable acyl-CoA dehydrogenase | chromosome | CDS | 1519266 | 1155 | + | 0.691775 |
NA | BP2377 | putative AMP-binding protein | chromosome | CDS | 2516240 | 1692 | + | 0.682624 |
NA | BP0534 | probable enoyl-CoA hydratase/isomerase | chromosome | CDS | 543183 | 765 | + | 0.673203 |
NA | BP3244 | putative oxidoreductase | chromosome | CDS | 3462382 | 711 | - | 0.721519 |
NA | BP0310 | putative acyl-CoA dehydrogenase | chromosome | CDS | 314705 | 1170 | + | 0.721368 |
NA | BP0285 | putative acetyl esterase | chromosome | CDS | 290348 | 1005 | - | 0.711443 |
NA | BP3518 | putative phospholipase D family protein | chromosome | CDS | 3726844 | 1431 | + | 0.700908 |
NA | BP1702 | probable enoyl-CoA hydratase/isomerase | chromosome | CDS | 1785555 | 795 | - | 0.703145 |
NA | BP2342 | hypothetical protein | chromosome | CDS | 2482467 | 660 | + | 0.677273 |
NA | BP0859 | short-chain dehydrogenase | chromosome | CDS | 891226 | 777 | - | 0.697555 |
NA | BP0625 | probable acyl-CoA dehydrogenase | chromosome | CDS | 632837 | 1176 | - | 0.659864 |
NA | BP1686 | probable short-chain dehydrogenase | chromosome | CDS | 1771179 | 714 | + | 0.72409 |
NA | BP2555 | conserved hypothetical protein | chromosome | CDS | 2709288 | 444 | - | 0.637387 |
NA | BP0634 | probable acyl-CoA dehydrogenase | chromosome | CDS | 642492 | 1149 | + | 0.6745 |
NA | BP0835 | putative membrane protein | chromosome | CDS | 865737 | 804 | + | 0.707711 |
NA | BP2097 | putative esterase | chromosome | CDS | 2218368 | 876 | - | 0.738584 |
NA | BP3580 | intracellular PHB depolymerase | chromosome | CDS | 3793340 | 1224 | - | 0.666667 |
NA | BP0627 | probable enoyl-CoA hydratase/isomerase | chromosome | CDS | 634843 | 786 | - | 0.69084 |
NA | BP0036 | probable acyltransferase | chromosome | CDS | 40604 | 729 | + | 0.670782 |
NA | BP1645 | probable short-chain dehydrogenase | chromosome | CDS | 1732863 | 759 | + | 0.72332 |
NA | BP2059 | putative thiolase | chromosome | CDS | 2178724 | 1188 | + | 0.708754 |
NA | BP0636 | conserved hypothetical protein | chromosome | CDS | 644440 | 1155 | + | 0.709091 |
NA | BP3706 | putative enoyl-CoA hydratase/isomerase family protein | chromosome | CDS | 3914507 | 774 | - | 0.70801 |
NA | BP2099 | putative thiolase | chromosome | CDS | 2220632 | 1197 | - | 0.70259 |
NA | BP0635 | probable enoyl-CoA hydratase | chromosome | CDS | 643637 | 807 | + | 0.695167 |
NA | BP0883 | biotin carboxyl carrier protein | chromosome | CDS | 921253 | 522 | + | 0.683908 |
NA | BP2944 | conserved hypothetical protein | chromosome | CDS | 3132734 | 468 | - | 0.666667 |
NA | BP2454 | putative oxidoreductase | chromosome | CDS | 2594948 | 783 | - | 0.687101 |
NA | BP1782 | probable enoyl-CoA hydratase/isomerase | chromosome | CDS | 1873375 | 798 | + | 0.691729 |
NA | BP0309 | putative enoyl-CoA hydratase/isomerase | chromosome | CDS | 313839 | 864 | + | 0.694444 |
NA | BP1781 | conserved hypothetical protein | chromosome | CDS | 1872954 | 402 | + | 0.68408 |
NA | BP0219 | probable short-chain dehydrogenase | chromosome | CDS | 229282 | 726 | + | 0.701102 |
NA | BP0420 | probable acyl-CoA dehydrogenase | chromosome | CDS | 420790 | 1161 | + | 0.704565 |
NA | BP2726 | putative oxidoreductase | chromosome | CDS | 2892790 | 705 | - | 0.693617 |
NA | BP3198 | enoyl-CoA hydratase/isomerase | chromosome | CDS | 3410019 | 783 | + | 0.734355 |
NA | BP1103 | probable short chain dehydrogenase | chromosome | CDS | 1152892 | 756 | - | 0.727513 |
NA | BP0311 | probable acid-coenzyme A ligase | chromosome | CDS | 315915 | 1650 | + | 0.698788 |
NA | BP3010 | putative oxidoreductase | chromosome | CDS | 3200634 | 813 | - | 0.685117 |
accA | BP1910 | acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha | chromosome | CDS | 2012677 | 966 | + | 0.687371 |
accA | BP0449 | biotin carboxylase subunit of acetyl-CoA carboxylase | chromosome | CDS | 453277 | 2022 | + | 0.707221 |
accB | BP0448 | carboxyltransferase subunit of acetyl-CoA carboxylase | chromosome | CDS | 451617 | 1614 | + | 0.677199 |
accC | BP0889 | biotin carboxylase | chromosome | CDS | 926407 | 1371 | + | 0.663749 |
accD | BP3591 | acetyl-coenzyme A carboxylase carboxyl transferase subunit beta | chromosome | CDS | 3804849 | 879 | + | 0.656428 |
acpP | BP2440 | acyl carrier protein | chromosome | CDS | 2582664 | 240 | - | 0.533333 |
acpS | BP2079 | putative holo-[acyl-carrier protein] synthase | chromosome | CDS | 2200429 | 462 | + | 0.712121 |
atoE | BP0404 | putative short-chain fatty acids transporter | chromosome | CDS | 403681 | 1314 | - | 0.650685 |
catI | BP0221 | 3-oxoadipate CoA-transferase subunit A | chromosome | CDS | 231039 | 687 | + | 0.697234 |
catJ | BP0222 | 3-oxoadipate CoA-transferase subunit B | chromosome | CDS | 231725 | 645 | + | 0.685271 |
cdsA | BP1424 | phosphatidate cytidylyltransferase | chromosome | CDS | 1498362 | 858 | + | 0.726107 |
dxr | BP1425 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase | chromosome | CDS | 1499216 | 1200 | + | 0.715833 |
dxs | BP2798 | 1-deoxy-D-xylulose 5-phosphate synthase | chromosome | CDS | 2971443 | 1863 | - | 0.696726 |
fabD | BP2442 | malonyl CoA-acyl carrier protein transacylase | chromosome | CDS | 2583840 | 936 | - | 0.719017 |
fabE | BP2997 | biotin carboxyl carrier protein of acetyl-CoA carboxylase | chromosome | CDS | 3189042 | 450 | - | 0.646667 |
fabF | BP2439 | 3-oxoacyl-[acyl-carrier-protein] synthase II | chromosome | CDS | 2581245 | 1230 | - | 0.64065 |
fabG | BP1128 | 3-oxoacyl-[acyl-carrier protein] reductase | chromosome | CDS | 1191801 | 759 | - | 0.703557 |
fabG | BP1672 | 3-oxoacyl-[acyl-carrier protein] reductase | chromosome | CDS | 1758831 | 756 | + | 0.698413 |
fabG | BP2554 | probable 3-oxoacyl-[acyl-carrier protein] reductase | chromosome | CDS | 2708541 | 747 | - | 0.676037 |
fabG | BP2441 | 3-oxoacyl-[acyl-carrier protein] reductase | chromosome | CDS | 2583086 | 753 | - | 0.697211 |
fabG | BP1785 | 3-oxoacyl-[acyl-carrier protein] reductase | chromosome | CDS | 1875776 | 777 | + | 0.673102 |
fabG | BP2996 | biotin carboxylase | chromosome | CDS | 3187686 | 1347 | - | 0.659985 |
fabH | BP2443 | 3-oxoacyl-[acyl-carrier-protein] synthase III | chromosome | CDS | 2584857 | 987 | - | 0.68997 |
fabI | BP1002 | enoyl-[acyl-carrier-protein] reductase [NADH] | chromosome | CDS | 1048007 | 774 | - | 0.702842 |
fabI | BP3215 | enoyl-[acyl-carrier-protein] reductase [NADH] | chromosome | CDS | 3426917 | 786 | + | 0.678117 |
fabZ | BP1430 | (3R)-hydroxymyristol-[acyl carrier protein] dehydratase | chromosome | CDS | 1506039 | 456 | + | 0.631579 |
fadD | BP2811 | long-chain-fatty-acid--CoA ligase | chromosome | CDS | 2985477 | 1692 | + | 0.670804 |
gcdH | BP1537 | glutaryl-CoA dehydrogenase | chromosome | CDS | 1609639 | 1194 | - | 0.655779 |
idnO | BP0464 | gluconate 5-dehydrogenase | chromosome | CDS | 474679 | 780 | + | 0.714103 |
ispD | BP0865 | 4-diphosphocytidyl-2c-methyl-D-erythritolsynthas e | chromosome | CDS | 900394 | 684 | + | 0.745614 |
ispE | BP3126 | 4-diphosphocytidyl-2-C-methyl-D-erythritolkinase | chromosome | CDS | 3330595 | 900 | - | 0.648889 |
ispF | BP0866 | 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | chromosome | CDS | 901074 | 489 | + | 0.693252 |
ispG | BP2199 | 1-hydroxy-2-methyl-2-(E)-butenyl4-diphosphatesyn thase | chromosome | CDS | 2320689 | 1296 | - | 0.679012 |
lytB | BP1237 | putative drug tolerance protein | chromosome | CDS | 1299292 | 978 | + | 0.699386 |
mmsB | BP1447 | 3-hydroxyisobutyrate dehydrogenase | chromosome | CDS | 1521637 | 894 | + | 0.703579 |
paaG | BP1808 | probable enoyl-CoA hydratase | chromosome | CDS | 1896853 | 810 | - | 0.746914 |
paaG | BP2677 | probable enoyl-CoA hydratase | chromosome | CDS | 2842296 | 789 | - | 0.708492 |
pcaI | BP1788 | 3-oxoadipate CoA-transferase subunit A | chromosome | CDS | 1878765 | 669 | + | 0.636771 |
pcaJ | BP1789 | 3-oxoadipate CoA-transferase subunit B | chromosome | CDS | 1879426 | 642 | + | 0.633956 |
pgsA | BP2082 | putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | chromosome | CDS | 2203818 | 573 | + | 0.645724 |
phbB | BP1150 | acetoacetyl-CoA reductase | chromosome | CDS | 1216623 | 738 | + | 0.636856 |
phbC | BP1149 | poly-beta-hydroxybutyrate polymerase | chromosome | CDS | 1214918 | 1638 | + | 0.661783 |
psd | BP1294 | phosphatidylserine decarboxylase proenzyme | chromosome | CDS | 1365396 | 894 | - | 0.683445 |
pssA | BP0792 | putative CDP-diacylglycerol--serine O-phosphatidyltransferase protein | chromosome | CDS | 814675 | 780 | + | 0.660256 |
uppS | BP1423 | undecaprenyl pyrophosphate synthetase | chromosome | CDS | 1497578 | 765 | + | 0.675817 |
wcbP | BP1655 | putative oxidoreductase | chromosome | CDS | 1741924 | 774 | - | 0.724806 |