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2024-05-03 11:25:50

Gene list

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COG category: Lipid transport and metabolism
Organism: Vibrio parahaemolyticus RIMD 2210633, O3:K6

Number of genes found: 130

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Vibrio parahaemolyticus RIMD 2210633, O3:K6
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
VP0029 fatty oxidation complex, beta subunitchromosome 1 CDS26892 1176 - 0.512755
VP0030 fatty oxidation complex, alpha subunitchromosome 1 CDS28083 2172 - 0.483886
VP0085 hypothetical proteinchromosome 1 CDS94138 1638 + 0.507937
VP0207 putative oxidoreductase (flagellin modification)chromosome 1 CDS217516 762 + 0.41601
VP0348 conserved hypothetical proteinchromosome 1 CDS342567 549 + 0.468124
VP0351 putative long-chain-fatty-acid-CoA ligasechromosome 1 CDS346021 1809 + 0.462134
VP0537 LytB proteinchromosome 1 CDS553595 966 + 0.477226
VP0608 GcpE proteinchromosome 1 CDS632160 1119 + 0.457551
VP0626 hypothetical proteinchromosome 1 CDS655018 1137 + 0.432718
VP0645 conserved hypothetical proteinchromosome 1 CDS675440 444 + 0.432432
VP0685 phosphatidylglycerophosphatase Achromosome 1 CDS717477 507 + 0.475345
VP0686 1-deoxyxylulose-5-phosphate synthasechromosome 1 CDS718060 1866 - 0.463558
VP0740 kinase, GHMP familychromosome 1 CDS777619 888 - 0.460586
VP0808 oxidoreductase, short-chain dehydrogenase/reductase familychromosome 1 CDS840902 828 - 0.466184
VP0870 long-chain-fatty-acid-CoA ligasechromosome 1 CDS902659 1692 + 0.471631
VP0881 putative beta-ketoacyl-ACP synthasechromosome 1 CDS914577 1224 - 0.508987
VP0882 putative beta-ketoacyl-ACP reductasechromosome 1 CDS915797 726 - 0.501377
VP0883 putative beta-hydroxydecanoyl-ACP dehydrasechromosome 1 CDS916519 465 - 0.449462
VP0884 putative 3-oxoacyl-ACP synthasechromosome 1 CDS916976 1188 - 0.493266
VP0891 putative (3R)-hydroxymyristoyl-(acyl carrier protein) dehydratasechromosome 1 CDS925408 369 - 0.449865
VP0892 putative surfactin synthetasechromosome 1 CDS925787 1371 - 0.473377
VP0894 putative acyl carrier proteinchromosome 1 CDS927752 258 - 0.406977
VP0895 putative acyl carrier proteinchromosome 1 CDS928025 261 - 0.394636
VP0896 putative phospholipid biosynthesis acyltransferasechromosome 1 CDS928299 780 - 0.39359
VP0933 o-succinylbenzoic acid-CoA ligasechromosome 1 CDS971155 1443 + 0.469161
VP0937 conserved hypothetical proteinchromosome 1 CDS973984 1875 - 0.471467
VP0949 acyl-CoA thioesterase IIchromosome 1 CDS990454 861 - 0.471545
VP1120 oxidoreductase, short-chain dehydrogenase/reductase familychromosome 1 CDS1178614 726 + 0.475207
VP1183 cardiolipin synthasechromosome 1 CDS1241952 1455 - 0.47354
VP1193 conserved hypothetical proteinchromosome 1 CDS1254180 612 - 0.455882
VP1230 oxidoreductase, acyl-CoA dehydrogenase familychromosome 1 CDS1295697 2283 + 0.477004
VP1320 putative CDP-ribitol pyrophosphorylasechromosome 1 CDS1400091 717 + 0.400279
VP1452 acyl carrier protein phosphodiesterasechromosome 1 CDS1561398 585 - 0.442735
VP1492 conserved hypothetical proteinchromosome 1 CDS1602458 828 - 0.461353
VP1591 3-hydroxydecanoyl-(acyl-carrier-protein)dehydrat asechromosome 1 CDS1683550 519 + 0.454721
VP1644 PrpE proteinchromosome 1 CDS1759485 1905 - 0.476115
VP1730 putative long-chain-fatty-acid-CoA ligasechromosome 1 CDS1845567 1560 + 0.477564
VP1732 oxidoreductase, short-chain dehydrogenase/reductase familychromosome 1 CDS1847844 795 + 0.484277
VP1826 hypothetical proteinchromosome 1 CDS1926537 822 - 0.383212
VP1943 CDP-diacylglycerol-glycerol-3-phosphate3-phospha tidyltransferasechromosome 1 CDS2035030 558 - 0.451613
VP1964 putative long-chain-fatty-acid-CoA ligasechromosome 1 CDS2054705 1542 - 0.464332
VP1971 putative acyl-CoA hydrolasechromosome 1 CDS2063210 396 + 0.459596
VP2033 oxidoreductase, short-chain dehydrogenase/reductase familychromosome 1 CDS2131194 747 + 0.483266
VP2052 3-oxoacyl-(acyl-carrier-protein) synthase IIchromosome 1 CDS2152681 1251 - 0.470823
VP2053 acyl carrier proteinchromosome 1 CDS2154025 234 - 0.41453
VP2054 3-oxoacyl-(acyl-carrier-protein) reductasechromosome 1 CDS2154504 735 - 0.478912
VP2055 malonyl Coa-acyl carrier protein transacylasechromosome 1 CDS2155273 924 - 0.469697
VP2056 3-oxoacyl-(acyl-carrier-protein) synthase IIIchromosome 1 CDS2156273 951 - 0.458465
VP2057 fatty acid/phospholipid synthesis protein PlsXchromosome 1 CDS2157229 1026 - 0.451267
VP2120 oxidoreductase, short-chain dehydrogenase/reductase familychromosome 1 CDS2224867 684 + 0.48538
VP2146 putative oxidoreductase proteinchromosome 1 CDS2257838 690 + 0.468116
VP2189 acetyl-CoA carboxylase, carboxyl transferase beta subunitchromosome 1 CDS2298486 927 - 0.468177
VP2194 3-oxoacyl-[acyl-carrier-protein] synthase Ichromosome 1 CDS2307363 1212 - 0.480198
VP2208 fatty oxidation complex, alpha subunitchromosome 1 CDS2320500 2112 - 0.464962
VP2209 fatty oxidation complex, beta subunitchromosome 1 CDS2322611 1308 - 0.5
VP2212 long-chain fatty acid transport proteinchromosome 1 CDS2326228 1251 + 0.433253
VP2213 long-chain fatty acid transport proteinchromosome 1 CDS2327788 1320 + 0.460606
VP2289 oxidoreductase, acyl-CoA dehydrogenase familychromosome 1 CDS2397135 2445 + 0.489571
VP2302 acetyl-CoA carboxylase, carboxyl transferase alpha subunitchromosome 1 CDS2411456 960 - 0.469792
VP2307 (3R)-hydroxymyristoyl-(acyl-carrier-protein)dehy dratasechromosome 1 CDS2418710 453 - 0.441501
VP2312 1-deoxy-D-xylulose 5-phosphate reductoisomerasechromosome 1 CDS2424712 1206 - 0.465174
VP2313 phosphatidate cytidylyltransferasechromosome 1 CDS2425969 843 - 0.427046
VP2314 undecaprenyl diphosphate synthasechromosome 1 CDS2426824 756 - 0.444444
VP2408 hypothetical proteinchromosome 1 CDS2527875 1113 + 0.438455
VP2425 putative long-chain-fatty-acid-CoA ligasechromosome 1 CDS2542758 1707 + 0.471002
VP2445 putative lipid carrier proteinchromosome 1 CDS2565083 534 - 0.417603
VP2558 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase MeCPschromosome 1 CDS2702280 477 - 0.473795
VP2559 4-diphosphocytidyl-2C-methyl-D-erythritolsynthas echromosome 1 CDS2702774 705 - 0.466667
VP2568 holo-(acyl-carrier-protein) synthasechromosome 1 CDS2715360 381 - 0.467192
VP2657 1-acyl-sn-glycerol-3-phosphate acyltransferasechromosome 1 CDS2809226 726 - 0.465565
VP2698 putative V10 pilinchromosome 1 CDS2852305 498 - 0.421687
VP2825 phosphatidylserine decarboxylasechromosome 1 CDS2992086 858 + 0.481352
VP2878 acetyl-CoA synthasechromosome 1 CDS3049669 1953 + 0.503328
VP2880 acetyl-CoA carboxylase, biotin carboxyl carrier proteinchromosome 1 CDS3052438 459 + 0.494553
VP2881 acetyl-CoA carboxylase, biotin carboxylasechromosome 1 CDS3052911 1344 + 0.485119
VP2934 phosphatidylserine synthasechromosome 1 CDS3126321 1341 + 0.425056
VP2947 glycerol-3-phosphate acyltransferasechromosome 1 CDS3150685 2427 + 0.482901
VP2974 lysophospholipase L2chromosome 1 CDS3172573 1011 + 0.480712
VP3055 conserved hypothetical proteinchromosome 1 CDS3261105 879 - 0.453925
VPA0077 2-deoxy-D-gluconate 3-dehydrogenasechromosome 2 CDS68938 762 + 0.493438
VPA0081 hypothetical proteinchromosome 2 CDS71323 912 + 0.508772
VPA0125 oxidoreductase, short-chain dehydrogenase/reductase familychromosome 2 CDS116207 732 - 0.515027
VPA0129 putative phosphatidylglycerophosphatase Bchromosome 2 CDS121369 726 - 0.436639
VPA0205 putative C-factorchromosome 2 CDS207342 708 + 0.485876
VPA0222 putative long-chain fatty acid transport proteinchromosome 2 CDS222903 1362 - 0.48605
VPA0226 lecithin-dependent hemolysin (LDH)chromosome 2 CDS229683 1257 - 0.47494
VPA0341 hypothetical proteinchromosome 2 CDS331396 1518 - 0.466403
VPA0382 putative sorbitol-6-phosphate 2-dehydrogenasechromosome 2 CDS377393 762 + 0.5
VPA0472 putative long-chain fatty acid transport proteinchromosome 2 CDS471994 1104 + 0.471014
VPA0575 acetyl-CoA synthasechromosome 2 CDS574250 1971 - 0.459665
VPA0603 NodN-related proteinchromosome 2 CDS605426 681 + 0.436123
VPA0616 putative enoyl-CoA hydratase/isomerasechromosome 2 CDS620229 846 - 0.491726
VPA0617 putative propionyl-CoA carboxylase (beta subunit) proteinchromosome 2 CDS621112 1605 - 0.51028
VPA0618 putative acyl-CoA dehydrogenasechromosome 2 CDS622751 1170 - 0.516239
VPA0620 putative acyl-CoA thiolasechromosome 2 CDS624632 1227 + 0.504482
VPA0622 putative acyl-CoA dehydrogenasechromosome 2 CDS627402 1155 + 0.51342
VPA0623 putative enoyl-CoA hydratase/isomerasechromosome 2 CDS628598 786 + 0.489822
VPA0624 putative enoyl-CoA hydratase/isomerasechromosome 2 CDS629392 1137 + 0.494283
VPA0625 putative 3-hydroxyisobutyrate dehydrogenasechromosome 2 CDS630555 903 + 0.506091
VPA0626 putative short-chain dehydrogenasechromosome 2 CDS631593 699 + 0.484979
VPA0693 putative diacylglycerol kinasechromosome 2 CDS718885 900 + 0.49
VPA0707 putative delta-9 fatty acid desaturasechromosome 2 CDS733331 1125 - 0.439111
VPA0753 hypothetical proteinchromosome 2 CDS782955 552 + 0.485507
VPA0771 putative lipopolysaccharide modification acyltransferasechromosome 2 CDS801905 1851 - 0.465694
VPA0795 acetyl-CoA carboxylase, carboxyl transferase beta subunitchromosome 2 CDS822670 870 + 0.48046
VPA0860 long-chain fatty acid transport proteinchromosome 2 CDS898477 1242 - 0.454911
VPA0968 3-hydroxy-3-methylglutaryl CoA reductasechromosome 2 CDS1012301 1263 + 0.498812
VPA0971 3-oxoacyl-(acyl-carrier-protein) synthase IIIchromosome 2 CDS1016996 1095 - 0.49589
VPA1097 hypothetical proteinchromosome 2 CDS1156325 873 - 0.450172
VPA1117 putative short-chain dehydrogenasechromosome 2 CDS1179669 759 - 0.494071
VPA1118 3-hydroxyisobutyrate dehydrogenasechromosome 2 CDS1180437 897 - 0.503902
VPA1119 putative enoyl-CoA hydratase/isomerasechromosome 2 CDS1181352 1131 - 0.471264
VPA1120 putative enoyl-CoA hydratase/isomerasechromosome 2 CDS1182493 777 - 0.513514
VPA1121 putative acyl-CoA dehydrogenasechromosome 2 CDS1183319 1155 - 0.509091
VPA1123 putative acyl-CoA thiolasechromosome 2 CDS1186125 1179 - 0.490246
VPA1125 putative acyl-CoA dehydrogenasechromosome 2 CDS1187945 1170 + 0.478632
VPA1126 putative acyl-CoA carboxyltransferase beta chainchromosome 2 CDS1189213 1608 + 0.498756
VPA1127 putative enoyl-CoA hydratase/isomerasechromosome 2 CDS1190905 804 + 0.49005
VPA1128 putative acyl-CoA carboxylase alpha chainchromosome 2 CDS1191662 2115 + 0.480851
VPA1152 putative long-chain-fatty-acid-CoA ligasechromosome 2 CDS1215552 1953 - 0.497184
VPA1158 acetyl-CoA synthasechromosome 2 CDS1222082 2034 + 0.478859
VPA1202 polyhydroxyalkanoic acid synthasechromosome 2 CDS1275721 1776 - 0.45045
VPA1204 acetyl-CoA acetyltransferasechromosome 2 CDS1277955 1209 - 0.501241
VPA1205 acetoacetyl-CoA reductasechromosome 2 CDS1279176 741 - 0.470985
VPA1247 hypothetical proteinchromosome 2 CDS1320942 1854 + 0.447141
VPA1304 putative 3-oxoacyl-(acyl carrier protein) reductasechromosome 2 CDS1382733 720 - 0.490278
VPA1340 hypothetical proteinchromosome 2 CDS1412804 249 - 0.381526
VPA1397 acyl-CoA thioester hydrolase-related proteinchromosome 2 CDS1467767 486 + 0.444444
VPA1419 putative 3-hydroxyisobutyrate dehydrogenasechromosome 2 CDS1491866 879 - 0.49033
VPA1658 hypothetical proteinchromosome 2 CDS1775995 1212 + 0.491749