Gene list
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COG category: Lipid transport and metabolism
Organism: Symbiobacterium thermophilum, IAM14863
Number of genes found: 90
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| Symbiobacterium thermophilum, IAM14863 | |||||||||
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| Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
| NA | STH1186 | methylmalonyl-CoA mutase, N-terminal domain | SubName: Full=Methylmalonyl-CoA mutase, N-terminal domain; | chromosome | CDS | 1315969 | 1671 | + | 0.689408 |
| NA | STH808 | 3-oxoacyl-(acyl-carrier-protein) synthase III | SubName: Full=3-oxoacyl-(Acyl-carrier-protein) synthase III; | chromosome | CDS | 904270 | 1053 | - | 0.694207 |
| NA | STH601 | putative oxidoreductase | SubName: Full=Putative oxidoreductase; | chromosome | CDS | 650667 | 1218 | - | 0.738095 |
| NA | STH1447 | fatty acid/phospholipid synthesis protein | RecName: Full=Phosphate acyltransferase; EC=2.3.1.n2; AltName: Full=Acyl-ACP phosphotransacylase; AltName: Full=Acyl-[acyl-carrier-protein]--phosphate acyltransferase; AltName: Full=Phosphate-acyl-ACP acyltransferase; | chromosome | CDS | 1589886 | 1041 | + | 0.702209 |
| NA | STH3011 | acetyl-CoA acyltransferase | SubName: Full=Acetyl-CoA acyltransferase; | chromosome | CDS | 3229685 | 1179 | - | 0.688719 |
| NA | STH1191 | biotin carboxylase | SubName: Full=Biotin carboxylase; | chromosome | CDS | 1320855 | 1350 | + | 0.686667 |
| NA | STH1497 | phosphatidate cytidylyltransferase | RecName: Full=Phosphatidate cytidylyltransferase; EC=2.7.7.41; | chromosome | CDS | 1632845 | 885 | + | 0.699435 |
| NA | STH3246 | putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase | RecName: Full=4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Short=CMK; EC=2.7.1.148; AltName: Full=4-(cytidine-5-diphospho)-2-C-methyl-D-erythritol kinase; | chromosome | CDS | 3460585 | 849 | - | 0.731449 |
| NA | STH2190 | putative long-chain fatty-acid-CoA ligase | SubName: Full=Putative long-chain fatty-acid-CoA ligase; | chromosome | CDS | 2345428 | 1572 | + | 0.701654 |
| NA | STH704 | conserved hypothetical protein | SubName: Full=Putative uncharacterized protein; | chromosome | CDS | 775226 | 1980 | + | 0.689899 |
| NA | STH1187 | methylmalonyl-CoA mutase, C-terminal domain | SubName: Full=Methylmalonyl-CoA mutase, C-terminal domain; | chromosome | CDS | 1317643 | 396 | + | 0.737374 |
| NA | STH798 | putative long-chain fatty-acid-CoA ligase | SubName: Full=Putative long-chain fatty-acid-CoA ligase; | chromosome | CDS | 894740 | 1506 | - | 0.681275 |
| NA | STH3012 | 3-hydroxyacyl-CoA dehydrogenase | SubName: Full=3-hydroxyacyl-CoA dehydrogenase; | chromosome | CDS | 3230879 | 2385 | - | 0.672537 |
| NA | STH2961 | hypothetical protein | SubName: Full=Putative uncharacterized protein; | chromosome | CDS | 3183185 | 156 | - | 0.692308 |
| NA | STH2304 | short-chain dehydrogenase | SubName: Full=Short-chain dehydrogenase; | chromosome | CDS | 2485417 | 765 | + | 0.699346 |
| NA | STH1304 | conserved domain protein | SubName: Full=Conserved domain protein; | chromosome | CDS | 1441068 | 798 | - | 0.68797 |
| NA | STH2191 | 3-oxoacyl-(acyl-carrier-protein) synthase III | SubName: Full=3-oxoacyl-(Acyl-carrier-protein) synthase III; | chromosome | CDS | 2347022 | 1035 | + | 0.722705 |
| NA | STH2913 | acetyl-CoA acetyltransferase | SubName: Full=Acetyl-CoA acetyltransferase; | chromosome | CDS | 3140089 | 1188 | - | 0.723064 |
| NA | STH960 | 3-oxoacyl-[acyl-carrier-protein] synthase | RecName: Full=3-oxoacyl-[acyl-carrier-protein] synthase 2; EC=2.3.1.179; | chromosome | CDS | 1077584 | 1242 | - | 0.713366 |
| NA | STH2183 | hypothetical protein | SubName: Full=Putative uncharacterized protein; | chromosome | CDS | 2338783 | 696 | - | 0.636494 |
| NA | STH1577 | enoyl-CoA hydratase/isomerase family protein | SubName: Full=Enoyl-CoA hydratase/isomerase family protein; | chromosome | CDS | 1714316 | 771 | + | 0.7393 |
| NA | STH1876 | acyl-CoA thioester hydrolase | SubName: Full=Acyl-CoA thioester hydrolase; | chromosome | CDS | 2017710 | 498 | + | 0.696787 |
| NA | STH1716 | phosphatidylserine synthase | SubName: Full=Phosphatidylserine synthase; | chromosome | CDS | 1863605 | 819 | + | 0.689866 |
| NA | STH2919 | putative phosphatase | SubName: Full=Putative phosphatase; | chromosome | CDS | 3147884 | 894 | - | 0.681208 |
| NA | STH1025 | acetyl-coenzyme A synthetase | SubName: Full=Acetyl-coenzyme A synthetase; | chromosome | CDS | 1138865 | 1950 | + | 0.728718 |
| NA | STH2477 | acyl-CoA dehydrogenase, short-chain specific | SubName: Full=Acyl-CoA dehydrogenase, short-chain specific; | chromosome | CDS | 2661140 | 1305 | + | 0.717241 |
| NA | STH289 | alpha/beta hydrolase | SubName: Full=Alpha/beta hydrolase; | chromosome | CDS | 324363 | 924 | - | 0.695887 |
| NA | STH938 | 3-hydroxyisobutyrate dehydrogenase | SubName: Full=3-hydroxyisobutyrate dehydrogenase; | chromosome | CDS | 1053749 | 885 | - | 0.708475 |
| NA | STH619 | long-chain fatty-acid-CoA ligase | SubName: Full=Long-chain fatty-acid-CoA ligase; | chromosome | CDS | 668443 | 1707 | + | 0.66198 |
| NA | STH968 | 3-oxoacyl-(acyl-carrier protein) reductase | SubName: Full=3-oxoacyl-(Acyl-carrier protein) reductase; | chromosome | CDS | 1085054 | 717 | + | 0.740586 |
| NA | STH3122 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | RecName: Full=2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Short=MECDP-synthase; Short=MECPP-synthase; Short=MECPS; EC=4.6.1.12; | chromosome | CDS | 3322506 | 474 | - | 0.7173 |
| NA | STH3016 | long-chain fatty-acid-CoA ligase | SubName: Full=Long-chain fatty-acid-CoA ligase; | chromosome | CDS | 3235706 | 1668 | - | 0.682254 |
| NA | STH2537 | conserved hypothetical protein | SubName: Full=Putative uncharacterized protein; | chromosome | CDS | 2721562 | 474 | - | 0.666667 |
| NA | STH804 | acetyl-CoA acetyltransferase | SubName: Full=Acetyl-CoA acetyltransferase; | chromosome | CDS | 901238 | 1179 | - | 0.731128 |
| NA | STH1842 | 1-deoxy-xylulose 5-phosphate synthase | RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; EC=2.2.1.7; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS; | chromosome | CDS | 1986562 | 1947 | - | 0.705701 |
| NA | STH592 | ketoreductase | SubName: Full=Ketoreductase; | chromosome | CDS | 643525 | 726 | - | 0.694215 |
| NA | STH1875 | short-chain dehydrogenase/oxidoreductase | SubName: Full=Short-chain dehydrogenase/oxidoreductase; | chromosome | CDS | 2016599 | 843 | - | 0.728351 |
| NA | STH620 | conserved hypothetical protein | SubName: Full=Putative uncharacterized protein; | chromosome | CDS | 670231 | 321 | + | 0.613707 |
| NA | STH2463 | acyl-CoA dehydrogenase, short-chain specific | SubName: Full=Acyl-CoA dehydrogenase, short-chain specific; | chromosome | CDS | 2648548 | 1146 | - | 0.667539 |
| NA | STH1253 | acyl-CoA dehydrogenase, short-chain specific | SubName: Full=Acyl-CoA dehydrogenase, short-chain specific; | chromosome | CDS | 1389420 | 1164 | + | 0.707904 |
| NA | STH881 | acetyl-coenzyme A synthetase | RecName: Full=Acetyl-coenzyme A synthetase; Short=AcCoA synthetase; Short=Acs; EC=6.2.1.1; AltName: Full=Acetate--CoA ligase; AltName: Full=Acyl-activating enzyme; | chromosome | CDS | 992238 | 1965 | + | 0.680916 |
| NA | STH2044 | conserved domain protein | SubName: Full=Conserved domain protein; | chromosome | CDS | 2182398 | 801 | + | 0.716604 |
| NA | STH700 | putative low temperature requirement C protein | SubName: Full=Putative low temperature requirement C protein; | chromosome | CDS | 770752 | 483 | + | 0.63354 |
| NA | STH805 | 3-oxoacyl-(acyl-carrier protein) reductase | SubName: Full=3-oxoacyl-(Acyl-carrier protein) reductase; | chromosome | CDS | 902435 | 741 | - | 0.678812 |
| NA | STH2357 | acyl-CoA dehydrogenase, short-chain specific | SubName: Full=Acyl-CoA dehydrogenase, short-chain specific; | chromosome | CDS | 2546560 | 1206 | - | 0.738806 |
| NA | STH2938 | holo-(acyl-carrier-protein) synthase | RecName: Full=Holo-[acyl-carrier-protein] synthase; Short=Holo-ACP synthase; EC=2.7.8.7; AltName: Full=4-phosphopantetheinyl transferase AcpS; | chromosome | CDS | 3163605 | 378 | - | 0.727513 |
| NA | STH2584 | 3-hydroxybutyryl-CoA dehydrogenase | SubName: Full=3-hydroxybutyryl-CoA dehydrogenase; | chromosome | CDS | 2768986 | 891 | + | 0.671156 |
| NA | STH1669 | 1-acyl-sn-glycerol-3-phosphate acyltransferase | SubName: Full=1-acyl-sn-glycerol-3-phosphate acyltransferase; | chromosome | CDS | 1810377 | 645 | + | 0.674419 |
| NA | STH1571 | acyl-CoA dehydrogenase, short-chain specific | SubName: Full=Acyl-CoA dehydrogenase, short-chain specific; | chromosome | CDS | 1709815 | 1146 | + | 0.685864 |
| NA | STH159 | medium-chain fatty-acid-CoA ligase | SubName: Full=Medium-chain fatty-acid-CoA ligase; | chromosome | CDS | 182461 | 1620 | + | 0.687654 |
| NA | STH577 | putative 3-oxoacyl-(acyl-carrier protein) reductase | SubName: Full=Putative 3-oxoacyl-(Acyl-carrier protein) reductase; | chromosome | CDS | 621733 | 747 | - | 0.752343 |
| NA | STH214 | 3-hydroxyacyl-CoA dehydrogenase | SubName: Full=3-hydroxyacyl-CoA dehydrogenase; | chromosome | CDS | 238063 | 1554 | + | 0.714929 |
| NA | STH1448 | 3-oxoacyl-(acyl-carrier-protein) synthase III | RecName: Full=3-oxoacyl-[acyl-carrier-protein] synthase 3; EC=2.3.1.180; AltName: Full=3-oxoacyl-[acyl-carrier-protein] synthase III; AltName: Full=Beta-ketoacyl-ACP synthase III; Short=KAS III; | chromosome | CDS | 1590923 | 993 | + | 0.70997 |
| NA | STH1579 | putative propionyl-CoA carboxylase beta subunit | SubName: Full=Putative propionyl-CoA carboxylase beta subunit; | chromosome | CDS | 1717077 | 1527 | + | 0.698101 |
| NA | STH1452 | acyl carrier protein | RecName: Full=Acyl carrier protein; Short=ACP; | chromosome | CDS | 1594577 | 252 | + | 0.575397 |
| NA | STH2466 | methylmalonyl-CoA mutase N-terminal domain | SubName: Full=Methylmalonyl-CoA mutase N-terminal domain; | chromosome | CDS | 2651979 | 1605 | - | 0.676012 |
| NA | STH3010 | acetyl-CoA dehydrogenase | SubName: Full=Acetyl-CoA dehydrogenase; | chromosome | CDS | 3227761 | 1770 | - | 0.667797 |
| NA | STH1189 | acetyl-CoA carboxylase alpha subunit | SubName: Full=Acetyl-CoA carboxylase alpha subunit; | chromosome | CDS | 1318528 | 1542 | + | 0.697147 |
| NA | STH1003 | putative 3-hydroxyacyl-CoA dehydrogenase | SubName: Full=Putative 3-hydroxyacyl-CoA dehydrogenase; | chromosome | CDS | 1122149 | 573 | + | 0.759162 |
| NA | STH2321 | acetyl-coenzyme A synthetase | SubName: Full=Acetyl-coenzyme A synthetase; | chromosome | CDS | 2507799 | 1899 | - | 0.702475 |
| NA | STH1990 | short chain dehydrogenase | SubName: Full=Short chain dehydrogenase; | chromosome | CDS | 2131134 | 756 | + | 0.724868 |
| NA | STH1011 | conserved hypothetical protein | SubName: Full=Putative uncharacterized protein; | chromosome | CDS | 1127239 | 1449 | + | 0.739821 |
| NA | STH2912 | 3-hydroxybutyryl-CoA dehydrogenase | SubName: Full=3-hydroxybutyryl-CoA dehydrogenase; | chromosome | CDS | 3139102 | 882 | - | 0.660998 |
| NA | STH2797 | lysophospholipase | SubName: Full=Lysophospholipase; | chromosome | CDS | 3011430 | 846 | - | 0.70331 |
| NA | STH2424 | conserved hypothetical protein | SubName: Full=Putative uncharacterized protein; | chromosome | CDS | 2608672 | 885 | - | 0.726554 |
| NA | STH1190 | acetyl-CoA carboxylase, biotin carboxyl carrier protein | SubName: Full=Acetyl-CoA carboxylase, biotin carboxyl carrier protein; | chromosome | CDS | 1320136 | 465 | + | 0.769892 |
| NA | STH1501 | 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase | RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; EC=1.17.7.1; AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; | chromosome | CDS | 1637331 | 1113 | + | 0.679245 |
| NA | STH910 | 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase | RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase; EC=1.17.1.2; | chromosome | CDS | 1029402 | 888 | + | 0.67455 |
| NA | STH1451 | 3-oxoacyl-(acyl-carrier protein) reductase | SubName: Full=3-oxoacyl-(Acyl-carrier protein) reductase; | chromosome | CDS | 1593794 | 747 | + | 0.682731 |
| NA | STH1870 | conserved hypothetical protein | SubName: Full=Putative uncharacterized protein; | chromosome | CDS | 2009754 | 798 | - | 0.676692 |
| NA | STH725 | acetyl-CoA acetyltransferase | SubName: Full=Acetyl-CoA acetyltransferase; | chromosome | CDS | 807272 | 1182 | + | 0.744501 |
| NA | STH1496 | undecaprenyl pyrophosphate synthase | RecName: Full=Isoprenyl transferase; EC=2.5.1.-; | chromosome | CDS | 1632100 | 771 | + | 0.687419 |
| NA | STH212 | enoyl-CoA hydratase/isomerase family protein | SubName: Full=Enoyl-CoA hydratase/isomerase family protein; | chromosome | CDS | 236506 | 774 | + | 0.678295 |
| NA | STH117 | (3R)-hydroxymyristoyl-(acyl-carrier-protein)dehy dratase | RecName: Full=3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ; EC=4.2.1.59; AltName: Full=(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; Short=(3R)-hydroxymyristoyl-ACP dehydrase; AltName: Full=Beta-hydroxyacyl-ACP dehydratase; | chromosome | CDS | 137677 | 429 | + | 0.703963 |
| NA | STH720 | acetyl-CoA acetyltransferase | SubName: Full=Acetyl-CoA acetyltransferase; | chromosome | CDS | 799413 | 1215 | + | 0.698765 |
| NA | STH2125 | putative lipase | SubName: Full=Putative lipase; | chromosome | CDS | 2270294 | 939 | - | 0.71246 |
| NA | STH2303 | putative gluconate dehydrogenase | SubName: Full=Putative gluconate dehydrogenase; | chromosome | CDS | 2484445 | 765 | - | 0.709804 |
| NA | STH3123 | 4-diphosphocytidyl-2-methyl-D-erithritolsynthase | RecName: Full=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; EC=2.7.7.60; AltName: Full=4-diphosphocytidyl-2C-methyl-D-erythritol synthase; AltName: Full=MEP cytidylyltransferase; Short=MCT; | chromosome | CDS | 3322973 | 711 | - | 0.7173 |
| NA | STH1572 | conserved hypothetical protein | SubName: Full=Putative uncharacterized protein; | chromosome | CDS | 1711046 | 207 | + | 0.652174 |
| NA | STH1450 | malonyl CoA-acyl carrier protein transacylase | RecName: Full=Malonyl CoA-acyl carrier protein transacylase; EC=2.3.1.39; | chromosome | CDS | 1592848 | 945 | + | 0.720635 |
| NA | STH213 | enoyl-CoA hydratase/isomerase family protein | SubName: Full=Enoyl-CoA hydratase/isomerase family protein; | chromosome | CDS | 237299 | 759 | + | 0.704875 |
| NA | STH1214 | conserved hypothetical protein | SubName: Full=Putative uncharacterized protein; | chromosome | CDS | 1352181 | 879 | + | 0.695108 |
| NA | STH2465 | methylmalonyl-CoA mutase C-terminal domain | SubName: Full=Methylmalonyl-CoA mutase C-terminal domain; | chromosome | CDS | 2651544 | 408 | - | 0.70098 |
| NA | STH1715 | conserved hypothetical protein | RecName: Full=Phosphatidylserine decarboxylase proenzyme; EC=4.1.1.65; Contains: RecName: Full=Phosphatidylserine decarboxylase alpha chain; Contains: RecName: Full=Phosphatidylserine decarboxylase beta chain; | chromosome | CDS | 1862961 | 648 | + | 0.700617 |
| NA | STH2927 | enoyl-(acyl-carrier protein) reductase | RecName: Full=Enoyl-[acyl-carrier-protein] reductase [NADH]; EC=1.3.1.9; | chromosome | CDS | 3154485 | 783 | - | 0.68327 |
| NA | STH63 | putative acyl-CoA hydrolase | SubName: Full=Putative acyl-CoA hydrolase; | chromosome | CDS | 84830 | 432 | + | 0.722222 |
| NA | STH1701 | hypothetical protein | SubName: Full=Putative uncharacterized protein; | chromosome | CDS | 1848766 | 672 | - | 0.696429 |
| NA | STH2869 | glycine reductase complex selenoprotein A | RecName: Full=Glycine/sarcosine/betaine reductase complex component A; EC=1.21.4.2; EC=1.21.4.3; EC=1.21.4.4; AltName: Full=Selenoprotein PA; AltName: Full=Thioredoxin reductase complex selenoprotein A; | chromosome | CDS | 3092533 | 468 | - | 0.66453 |
| NA | STH2865 | glycine reductase complex C | SubName: Full=Glycine reductase complex C; | chromosome | CDS | 3088395 | 2673 | - | 0.737748 |
| dxr | STH1499 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase | RecName: Full=1-deoxy-D-xylulose 5-phosphate reductoisomerase; Short=DXP reductoisomerase; EC=1.1.1.267; AltName: Full=1-deoxyxylulose-5-phosphate reductoisomerase; AltName: Full=2-C-methyl-D-erythritol 4-phosphate synthase; | chromosome | CDS | 1634850 | 1164 | + | 0.710481 |
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