Gene list
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COG category: Lipid transport and metabolism
Organism: Dehalococcoides sp. CBDB1, CBDB1
Number of genes found: 32
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Dehalococcoides sp. CBDB1, CBDB1 | |||||||||
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Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | cbdbA940 | CDP-alcohol phosphatidyltransferase family protein | SubName: Full=CDP-alcohol phosphatidyltransferase family protein; | chromosome | CDS | 768828 | 582 | - | 0.457045 |
NA | cbdbA901 | acyl-CoA synthetase (AMP-forming) / AMP-acid ligase | SubName: Full=Acyl-CoA synthetase (AMP-forming) / AMP-acid ligase; | chromosome | CDS | 737699 | 1893 | - | 0.447438 |
NA | cbdbA519 | activator of 2-hydroxyglutaryl-CoA dehydratase | SubName: Full=Activator of 2-hydroxyglutaryl-CoA dehydratase; | chromosome | CDS | 417896 | 852 | - | 0.496479 |
NA | cbdbA175 | probable lysophospholipase | SubName: Full=Probable lysophospholipase; | chromosome | CDS | 160674 | 834 | - | 0.476019 |
NA | cbdbA689 | oxidoreductase, short chaindehydrogenase | SubName: Full=Oxidoreductase, short chaindehydrogenase; | chromosome | CDS | 568499 | 795 | - | 0.481761 |
NA | cbdbA1648 | conserved domain protein | SubName: Full=Conserved domain protein; | chromosome | CDS | 1333272 | 1038 | - | 0.518304 |
NA | cbdbA1405 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1119563 | 324 | + | 0.481481 |
NA | cbdbA943 | myo-inositol-1-phosphate synthase family protein | SubName: Full=Myo-inositol-1-phosphate synthase family protein; | chromosome | CDS | 770647 | 1113 | - | 0.465409 |
NA | cbdbA367 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 310566 | 906 | + | 0.49117 |
NA | cbdbA489 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 395837 | 414 | + | 0.478261 |
NA | cbdbA404 | acyl CoA biotin-dependant carboxyltransferase | SubName: Full=Acyl CoA biotin-dependant carboxyltransferase; | chromosome | CDS | 344011 | 1551 | + | 0.491296 |
NA | cbdbA1006 | acyl-CoA synthetase (AMP-forming) / AMP-acid ligase | SubName: Full=Acyl-CoA synthetase (AMP-forming) / AMP-acid ligase; | chromosome | CDS | 812487 | 1518 | - | 0.463109 |
NA | cbdbA1346 | PAP2 family protein | SubName: Full=PAP2 family protein; | chromosome | CDS | 1066810 | 624 | - | 0.504808 |
NA | cbdbA787 | PAP2 family protein | SubName: Full=PAP2 family protein; | chromosome | CDS | 642433 | 591 | - | 0.407783 |
accC | cbdbA141 | acetyl-CoA carboxylase, biotin carboxylase | SubName: Full=Acetyl-CoA carboxylase, biotin carboxylase; EC=6.4.1.2; | chromosome | CDS | 133320 | 1497 | + | 0.492986 |
acpP | cbdbA1208 | acyl carrier protein | RecName: Full=Acyl carrier protein; Short=ACP; | chromosome | CDS | 973432 | 261 | + | 0.448276 |
acpS | cbdbA401 | holo-(acyl-carrier-protein) synthase | RecName: Full=Holo-[acyl-carrier-protein] synthase; Short=Holo-ACP synthase; EC=2.7.8.7; AltName: Full=4-phosphopantetheinyl transferase AcpS; | chromosome | CDS | 342909 | 360 | - | 0.488889 |
acs | cbdbA1126 | acetyl-CoA synthetase | SubName: Full=Acetyl-CoA synthetase; EC=6.2.1.1; | chromosome | CDS | 915410 | 1959 | + | 0.504339 |
cdsA | cbdbA315 | phosphatidate cytidylyltransferase | RecName: Full=Phosphatidate cytidylyltransferase; EC=2.7.7.41; | chromosome | CDS | 275196 | 804 | - | 0.480099 |
dxr | cbdbA314 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase | RecName: Full=1-deoxy-D-xylulose 5-phosphate reductoisomerase; Short=DXP reductoisomerase; EC=1.1.1.267; AltName: Full=1-deoxyxylulose-5-phosphate reductoisomerase; AltName: Full=2-C-methyl-D-erythritol 4-phosphate synthase; | chromosome | CDS | 274078 | 1134 | - | 0.496473 |
dxs | cbdbA720 | deoxyxylulose-5-phosphate synthase | RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; EC=2.2.1.7; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS; | chromosome | CDS | 585979 | 1944 | - | 0.455761 |
fabD | cbdbA1204 | malonyl CoA-acyl carrier protein transacylase | RecName: Full=Malonyl CoA-acyl carrier protein transacylase; EC=2.3.1.39; | chromosome | CDS | 971300 | 933 | + | 0.489818 |
fabF | cbdbA921 | 3-oxoacyl-[acyl-carrier-protein] synthase II | RecName: Full=3-oxoacyl-[acyl-carrier-protein] synthase 2; EC=2.3.1.179; | chromosome | CDS | 753463 | 1269 | + | 0.500394 |
fabG | cbdbA1205 | 3-oxoacyl-acyl carrier protein reductase | SubName: Full=3-oxoacyl-acyl carrier protein reductase; EC=1.1.1.100; | chromosome | CDS | 972241 | 744 | + | 0.494624 |
fabI | cbdbA1199 | putative enoyl-(acyl-carrier-protein) reductase | RecName: Full=Enoyl-[acyl-carrier-protein] reductase [NADH]; EC=1.3.1.9; | chromosome | CDS | 969459 | 840 | + | 0.490476 |
ispD | cbdbA74 | 2-C-methyl-D-erythritol4-phosphatecytidylyltrans ferase | RecName: Full=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; EC=2.7.7.60; AltName: Full=4-diphosphocytidyl-2C-methyl-D-erythritol synthase; AltName: Full=MEP cytidylyltransferase; Short=MCT; | chromosome | CDS | 55380 | 684 | + | 0.505848 |
ispE | cbdbA356 | 4-diphosphocytidyl-2C-methyl-D-erythritolkinase | RecName: Full=4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Short=CMK; EC=2.7.1.148; AltName: Full=4-(cytidine-5-diphospho)-2-C-methyl-D-erythritol kinase; | chromosome | CDS | 303785 | 855 | + | 0.499415 |
ispF | cbdbA75 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | RecName: Full=2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Short=MECDP-synthase; Short=MECPP-synthase; Short=MECPS; EC=4.6.1.12; | chromosome | CDS | 56069 | 474 | + | 0.529536 |
ispG | cbdbA311 | 1-hydroxy-2-methyl-2-(E)-butenyl4-diphosphatesyn thase | RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; EC=1.17.7.1; AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; | chromosome | CDS | 271958 | 1047 | - | 0.535817 |
ispH | cbdbA1294 | hydroxymethylbutenyl pyrophosphate reductase | RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase; EC=1.17.1.2; | chromosome | CDS | 1025961 | 855 | - | 0.506433 |
plsX | cbdbA517 | fatty acid/phospholipid synthesis protein PlsX | RecName: Full=Phosphate acyltransferase; EC=2.3.1.n2; AltName: Full=Acyl-ACP phosphotransacylase; AltName: Full=Acyl-[acyl-carrier-protein]--phosphate acyltransferase; AltName: Full=Phosphate-acyl-ACP acyltransferase; | chromosome | CDS | 416813 | 1044 | - | 0.496169 |
uppS | cbdbA316 | undecaprenyl diphosphate synthase | RecName: Full=Isoprenyl transferase; EC=2.5.1.-; | chromosome | CDS | 276003 | 711 | - | 0.481013 |