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Gene list

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COG category: Coenzyme transport and metabolism
Genomic element: chromosome

Number of genes found: 138

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Yersinia pestis biovar Medievalis str. 91001, 91001
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA YP2825 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1chromosome CDS3135639 828 - 0.4843
NA YP3610 putative 5-formyltetrahydrofolatecyclo-ligase-family proteinchromosome CDS4107259 597 + 0.517588
NA YP0565 putative exported proteinchromosome CDS606394 264 - 0.409091
NA YP0451 conserved hypothetical proteinchromosome CDS476003 1062 - 0.490584
NA YP0313 sulfite reductase, alpha subunitchromosome CDS328727 366 - 0.469945
abgT YP3420 putative integral membrane efflux proteinchromosome CDS3852506 1557 + 0.48298
apbA YP0760 2-dehydropantoate 2-reductasechromosome CDS819493 912 - 0.464912
apbE YP0699 thiamine biosynthesis lipoproteinchromosome CDS757642 1083 + 0.481994
bioA YP1010 7,8-diaminopelargonic acid synthetasechromosome CDS1087912 1281 + 0.533958
bioB YP1009 biotin synthasechromosome CDS1086776 1038 - 0.510597
bioD1 YP1006 dethiobiotin synthetasechromosome CDS1084123 738 - 0.539295
bioD2 YP2065 putative dethiobiotin synthetasechromosome CDS2296221 693 + 0.434343
bioF YP1008 8-amino-7-oxononanoate synthasechromosome CDS1085625 1152 - 0.580729
birA YP3289 bifunctional protein BirAchromosome CDS3672208 960 + 0.40625
btuB YP3138 putative vitamin B12 receptor proteinchromosome CDS3497913 1962 + 0.469419
btuC2 YP2212 vitamin B12 transport permease proteinchromosome CDS2462279 1077 - 0.486537
btuD YP2210 putative vitamin B12 transport ATP-binding proteinchromosome CDS2460872 762 - 0.471129
btuR YP2011 cob(I)alamin adenosyltransferasechromosome CDS2233507 591 - 0.497462
coaA YP3290 pantothenate kinasechromosome CDS3673202 951 - 0.398528
coaD YP0054 phosphopantetheine adenylyltransferasechromosome CDS63789 480 - 0.4625
coaE YP0254 Dephospho-CoA kinasechromosome CDS256111 621 - 0.470209
cysD YP0321 sulfate adenylyltransferase subunit 2chromosome CDS336814 909 + 0.491749
cysG1 YP0160 siroheme synthasechromosome CDS172879 1413 - 0.530078
ddhD YP0814 cdp-6-deoxy-delta-3,4-glucoseen reductasechromosome CDS880228 990 + 0.374747
dfp YP0049 DNA/pantothenate metabolism flavoproteinchromosome CDS60134 1218 - 0.481117
dxs YP0754 1-deoxy-D-xylulose 5-phosphate synthasechromosome CDS813877 1860 - 0.489247
fUI1 YP2766 putative permeasechromosome CDS3071341 1512 + 0.486772
fadI YP3280 NAD(P)H-flavin reductasechromosome CDS3656455 744 + 0.486559
fepC YP1251 putative transport ATP-binding proteinchromosome CDS1365774 786 - 0.521628
fhuC YP0293 ferrichrome transport ATP-binding protein FhuCchromosome CDS303144 795 + 0.543396
folA YP3693 dihydrofolate reductasechromosome CDS4205458 483 - 0.486542
folB YP2963 Dihydroneopterin aldolasechromosome CDS3297879 276 + 0.507246
folC YP2395 putative FolC bifunctional proteinchromosome CDS2662555 1383 - 0.531453
folD YP0855 putative FolD bifunctional proteinchromosome CDS926157 867 - 0.514418
folE YP1395 GTP cyclohydrolase Ichromosome CDS1537524 717 + 0.456067
folK YP0285 2-amino-4-hydroxy-6-hydroxymethyldihydropteridin epyrophosphokinasechromosome CDS292291 480 - 0.529167
folP YP0582 dihydropteroate synthasechromosome CDS621638 834 + 0.476019
gshA YP0385 gamma-glutamate-cysteine ligasechromosome CDS409400 1599 + 0.481551
gshB YP3507 glutathione synthetasechromosome CDS3992432 960 - 0.491667
hemA YP1864 glutamyl-tRNA reductasechromosome CDS2072980 1326 + 0.500754
hemB YP3277 delta-aminolevulinic acid dehydratasechromosome CDS3653078 1023 + 0.477028
hemC YP3197 porphobilinogen deaminasechromosome CDS3568967 1110 - 0.525225
hemD YP3196 uroporphyrinogen-III synthasechromosome CDS3568221 750 - 0.512
hemE YP3097 uroporphyrinogen decarboxylasechromosome CDS3447457 1068 - 0.512172
hemF YP2655 coproporphyrinogen III oxidase, aerobic HemFchromosome CDS2943600 930 + 0.533333
hemG YP3286 protoporphyrinogen oxidasechromosome CDS3664504 534 + 0.428839
hemH YP0813 ferrochelatasechromosome CDS878668 963 + 0.457944
hemL YP0296 glutamate-1-semialdehyde 2,1-aminomutasechromosome CDS307394 1281 - 0.509758
hemN1 YP0022 oxygen-independent coproporphyrinogen III oxidasechromosome CDS28771 1380 + 0.477536
hemN2 YP3496 putative oxidasechromosome CDS3983298 1143 - 0.492563
hemX YP3195 uroporphyrinogen III methylasechromosome CDS3567066 1134 - 0.506173
hemY YP0819 putative exported proteinchromosome CDS885332 1284 + 0.352804
hemY2 YP3194 putative protoheme IX biogenesis proteinchromosome CDS3565843 1221 - 0.525798
ilvB2 YP2079 putative acetolactate synthase large subunitchromosome CDS2314837 1683 + 0.498515
ilvC YP3158 ketol-acid reductoisomerasechromosome CDS3527007 1479 + 0.503043
ilvE YP3149 branched-chain amino acid aminotransferasechromosome CDS3517752 927 + 0.515642
ilvG YP3147 acetolactate synthase isozyme II large subunitchromosome CDS3515829 1647 + 0.532483
ilvI YP3646 acetolactate synthase isozyme III large subunitchromosome CDS4146307 1782 + 0.497194
ispA YP0755 geranyltranstransferasechromosome CDS815892 921 - 0.505972
ispB YP0570 octaprenyl-diphosphate synthasechromosome CDS610255 972 - 0.489712
kbl YP0060 2-amino-3-ketobutyrate coenzyme A ligasechromosome CDS69953 1242 + 0.5
ldhA1 YP2115 D-lactate dehydrogenasechromosome CDS2358455 1050 + 0.449524
ldhA2 YP2347 putative D-isomer specific 2-hydroxyacid dehydrogenase family proteinchromosome CDS2610579 951 - 0.480547
ldhA3 YP3988 putative D-isomer specific 2-hydroxyaciddehydrogenasechromosome CDS4538925 1017 + 0.509341
lipA YP1115 lipoic acid synthetasechromosome CDS1198926 948 + 0.503165
lipB YP1114 lipoate-protein ligase Bchromosome CDS1198014 702 + 0.490029
lplA YP2200 putative lipoate-protein ligase Achromosome CDS2451226 1017 - 0.450344
menA YP0106 1,4-dihydroxy-2-naphthoate octaprenyltransferasechromosome CDS112793 930 - 0.488172
menB YP2336 naphthoate synthasechromosome CDS2598362 858 - 0.519814
menC YP2335 putative O-succinylbenzoate-CoA synthasechromosome CDS2597391 972 - 0.569959
menD YP2338 menaquinone biosynthesis proteinchromosome CDS2600048 1704 - 0.569249
menF YP2339 menaquinone-specific isochorismate synthasechromosome CDS2601979 1374 - 0.5131
menG YP0105 S-adenosylmethionine:2-demethylmenaquinonemethyl transferasechromosome CDS112166 486 - 0.475309
metK YP3512 S-adenosylmethionine synthetasechromosome CDS3995910 1155 - 0.497835
moaA YP1000 molybdenum cofactor biosynthesis protein Achromosome CDS1077052 1026 - 0.491228
moaC YP0999 molybdenum cofactor biosynthesis protein Cchromosome CDS1076350 483 - 0.532091
moaD YP0998 molybdopterin [mpt] converting factor, subunit 1chromosome CDS1076108 246 - 0.528455
moaE YP0997 molybdopterin [mpt] converting factor, subunit 2chromosome CDS1075653 459 - 0.542484
mobA YP0014 molybdopterin-guanine dinucleotide biosynthesis protein Achromosome CDS19486 642 - 0.431464
mobB YP0013 probable molybdopterin-guanine dinucleotide biosynthesis protein Bchromosome CDS18956 558 - 0.408602
moeA YP1385 molybdopterin biosynthesis proteinchromosome CDS1524986 1275 - 0.499608
moeB YP1384 molybdopterin biosynthesis proteinchromosome CDS1524214 801 - 0.496879
mogA YP3716 molybdopterin biosynthesis proteinchromosome CDS4233006 588 - 0.45068
nadA YP1029 quinolinate synthetase Achromosome CDS1108151 1062 - 0.507533
nadB YP2514 L-aspartate oxidasechromosome CDS2785142 1638 - 0.484127
nadC YP0260 quinolinate phosphoribosyltransferasechromosome CDS261906 948 - 0.483122
nadD YP1106 putative nicotinate-nucleotide adenylyltransferasechromosome CDS1189677 693 + 0.484848
nadR YP3738 transcriptional regulator NadRchromosome CDS4258426 1272 - 0.488208
paaK YP1830 putative coenzyme synthetasechromosome CDS2036983 1287 + 0.520591
pabA YP0171 p-aminobenzoate synthetase, component IIchromosome CDS189500 576 + 0.519097
pabB YP1620 para-aminobenzoate synthase component Ichromosome CDS1768546 1377 + 0.511256
pabC YP2251 4-amino-4-deoxychorismate lyasechromosome CDS2498223 807 - 0.488228
panB YP0284 3-methyl-2-oxobutanoate hydroxymethyltransferasechromosome CDS291225 798 - 0.521303
panC YP0283 pantoate--beta-alanine ligasechromosome CDS290283 855 - 0.530994
panD YP0282 aspartate 1-decarboxylase precursorchromosome CDS289492 381 - 0.47769
panF YP3890 sodium/pantothenate symporterchromosome CDS4427350 1461 + 0.527721
pdxA YP3686 pyridoxal phosphate biosynthetic proteinchromosome CDS4200967 1008 + 0.499008
pdxB YP2400 putative D-isomer specific 2-hydroxyacid dehydrogenasechromosome CDS2668133 1188 - 0.537037
pdxH YP2156 pyridoxamine 5'-phosphate oxidasechromosome CDS2399790 654 - 0.490826
pdxJ YP2525 pyridoxal phosphate biosynthetic protein PdxJchromosome CDS2796648 732 + 0.495902
pdxY YP2154 pyridoxamine kinasechromosome CDS2397319 861 - 0.502904
pncB YP1180 putative nicotinate phosphoribosyltransferasechromosome CDS1272369 1251 + 0.47482
pnuC YP1028 intergral membrane NMN transport protein PnuCchromosome CDS1107304 726 - 0.461433
poxB YP1237 pyruvate dehydrogenase [cytochrome]chromosome CDS1352338 1722 + 0.522648
ribA YP2020 GTP cyclohydrolase IIchromosome CDS2245261 603 - 0.466003
ribB YP2973 3,4-dihydroxy-2-butanone 4-phosphate synthasechromosome CDS3310167 654 + 0.524465
ribD YP0748 riboflavin biosynthesis protein RibD [includes: diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino)uracil reductachromosome CDS809166 1110 + 0.527928
ribE YP2177 riboflavin synthase alpha chainchromosome CDS2422766 657 - 0.450533
ribF YP3706 riboflavin biosynthesis protein (includes: riboflavin kinase and FMN adenyltransferase)chromosome CDS4220336 939 - 0.500533
ribH YP0749 6,7-dimethyl-8-ribityllumazine synthasechromosome CDS810351 531 + 0.47646
serA1 YP1303 putative D-isomer specific 2-hydroxyacid dehydrogenase family proteinchromosome CDS1427154 966 + 0.601449
serA2 YP3611 D-3-phosphoglycerate dehydrogenasechromosome CDS4108120 1344 - 0.486607
serC YP1204 phosphoserine aminotransferasechromosome CDS1306465 948 - 0.481013
tbpA3 YP3657 thiamine-binding periplasmic proteinchromosome CDS4158781 993 + 0.498489
thiC YP3102 thiamine biosynthesis protein ThiCchromosome CDS3451285 2046 + 0.518084
thiD YP2725 putative phosphomethylpyrimidine kinasechromosome CDS3026809 801 - 0.556804
thiE YP3103 thiamine-phosphate pyrophosphorylasechromosome CDS3453302 690 + 0.534783
thiF YP3104 thiamine biosynthesis protein ThiFchromosome CDS3453981 798 + 0.5401
thiG YP3106 thiamine biosynthesis protein ThiGchromosome CDS3454977 831 + 0.540313
thiH YP3107 thiamine biosynthesis protein ThiHchromosome CDS3455785 1146 + 0.501745
thiL YP0751 thiamine-monophosphate kinasechromosome CDS811559 990 + 0.489899
thiQ YP3659 thiamine transport ATP-binding proteinchromosome CDS4161322 732 + 0.543716
thiS YP3105 Sulfur transfer protein involved in thiamine biosynthesischromosome CDS3454718 273 + 0.52381
trpE1 YP1826 Anthranilate/para-aminobenzoate synthases component Ichromosome CDS2031536 1977 - 0.468892
trpE2 YP2006 anthranilate synthase component Ichromosome CDS2228467 1566 - 0.505109
trpG YP2005 anthranilate synthase component IIchromosome CDS2227889 579 - 0.519862
ubiA YP0467 4-hydroxybenzoate octaprenyltransferasechromosome CDS498378 867 + 0.484429
ubiC YP0466 putative chorismate--pyruvate lyasechromosome CDS497646 567 + 0.516755
ubiD YP3279 putative oxidoreductasechromosome CDS3654922 1521 + 0.487837
ubiE YP3268 COQ5 methyltransferasechromosome CDS3645325 756 + 0.448413
ubiF YP1092 putative2-octaprenyl-3-methyl-6-methoxy-1,4-benz oquinolhydroxylasechromosome CDS1173326 1182 - 0.534687
ubiG YP0922 3-demethylubiquinone-9 3-methyltransferasechromosome CDS992207 729 + 0.499314
ubiH YP3606 2-octaprenyl-6-methoxyphenol hydroxylasechromosome CDS4102986 1179 - 0.550466
ubiX YP2391 3-octaprenyl-4-hydroxybenzoate carboxy-lyasechromosome CDS2658543 588 - 0.467687
visC YP3605 putative monooxygenasechromosome CDS4101593 1437 - 0.537926
ybtS YP1659 putative salicylate synthetasechromosome CDS1825109 1305 + 0.551724
yiuC YP1280 putative siderophore ABC transporter, ATP-binding subunitchromosome CDS1398339 789 - 0.504436
ysuD YP1422 putative iron-siderophore transport system, ATP-binding componentchromosome CDS1571622 849 - 0.485277