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2024-05-20 11:03:31

Gene list

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COG category: Coenzyme transport and metabolism
Genomic element: chromosome

Number of genes found: 105

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Prochlorococcus marinus subsp. pastoris str. CCMP1986, MED4
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA PMM1445 Putative nicotinate-nucleotide adenylyltransferaseSubName: Full=Putative nicotinate-nucleotide adenylyltransferase; EC=2.7.7.18; chromosome CDS1382194 582 + 0.250859
NA PMM0439 conserved hypothetical proteinRecName: Full=UPF0284 protein PMM0439; chromosome CDS418359 1158 + 0.316062
NA PMM0215 Delta-aminolevulinic acid dehydrataseRecName: Full=Delta-aminolevulinic acid dehydratase; EC=4.2.1.24; chromosome CDS209144 1002 + 0.356287
NA PMM0614 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS585243 624 + 0.333333
NA PMM0106 6-pyruvoyl tetrahydropterin synthaseSubName: Full=6-pyruvoyl tetrahydropterin synthase; EC=4.2.3.12; chromosome CDS109828 927 - 0.351672
NA PMM1409 possible RubredoxinSubName: Full=Possible Rubredoxin; chromosome CDS1352091 321 - 0.367601
NA PMM0078 possible 4'-phosphopantetheinyl transferase family proteinSubName: Full=Possible 4-phosphopantetheinyl transferase family protein; chromosome CDS84130 657 - 0.295282
NA PMM0539 Biotin/lipoate A/B protein ligase familySubName: Full=Biotin/lipoate A/B protein ligase family; chromosome CDS510061 672 - 0.30506
NA PMM1470 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1405129 759 + 0.275362
NA PMM0364 possible Malic enzymeSubName: Full=Possible Malic enzyme; chromosome CDS347296 321 + 0.373832
NA PMM0664 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS633606 675 + 0.282963
NA PMM0103 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS107552 387 - 0.25323
NA PMM1570 ATP:corrinoid adenosyltransferase BtuR/CobO/CobPSubName: Full=ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; chromosome CDS1498446 1161 - 0.369509
NA PMM0678 Quinolinate synthetase A proteinRecName: Full=Quinolinate synthase A; EC=2.5.1.72; chromosome CDS646299 915 - 0.310383
NA PMM0245 cob(I)alamin adenosyltransferaseSubName: Full=Cob(I)alamin adenosyltransferase; EC=5.3.1.24; chromosome CDS237925 576 - 0.28125
NA PMM0579 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS543310 465 + 0.322581
NA PMM0431 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS410074 702 + 0.257835
NA PMM1311 Oxygen-independent coproporphyrinogen III oxidaseSubName: Full=Oxygen-independent coproporphyrinogen III oxidase; EC=1.-.-.-; chromosome CDS1264238 1227 - 0.301548
NA PMM1650 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1580095 810 - 0.333333
NA PMM1053 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS995404 558 - 0.277778
NA PMM0036 CbiD proteinRecName: Full=Cobalt-precorrin-5B C(1)-methyltransferase; EC=2.1.1.195; AltName: Full=Cobalt-precorrin-6A synthase; chromosome CDS33758 1119 + 0.288651
NA PMM1693 Aminotransferases class-IVSubName: Full=Aminotransferases class-IV; chromosome CDS1627492 828 + 0.241546
NA PMM1692 possible p-aminobenzoate synthetaseSubName: Full=Possible p-aminobenzoate synthetase; EC=4.1.3.-; chromosome CDS1626176 1320 + 0.294697
NA PMM1275 DUF170SubName: Full=DUF170; chromosome CDS1228515 210 + 0.290476
NA PMM0503 possible precorrin-6X reductaseSubName: Full=Possible precorrin-6X reductase; EC=1.3.1.54; chromosome CDS476059 810 + 0.274074
NA PMM0525 FerrochelataseRecName: Full=Ferrochelatase; EC=4.99.1.1; AltName: Full=Heme synthase; AltName: Full=Protoheme ferro-lyase; chromosome CDS496255 1176 + 0.354592
NA PMM0491 4a-hydroxytetrahydrobiopterin dehydratase (PCD)RecName: Full=Putative pterin-4-alpha-carbinolamine dehydratase; Short=PHS; EC=4.2.1.96; AltName: Full=4-alpha-hydroxy-tetrahydropterin dehydratase; AltName: Full=Pterin carbinolamine dehydratase; Short=PCD; chromosome CDS464964 291 - 0.278351
BioA PMM1472 putative diaminopelargonic acid synthaseSubName: Full=Putative diaminopelargonic acid synthase; EC=2.6.1.62; chromosome CDS1406550 1302 + 0.336406
BioB PMM1093 Biotin synthaseRecName: Full=Biotin synthase; EC=2.8.1.6; chromosome CDS1038373 1008 + 0.347222
BioD PMM1471 putative Dethiobiotin synthaseRecName: Full=ATP-dependent dethiobiotin synthetase BioD; EC=6.3.3.3; AltName: Full=DTB synthetase; AltName: Full=Dethiobiotin synthase; chromosome CDS1405884 663 + 0.312217
BirA PMM0433 putative Biotin--acetyl-CoA-carboxylase ligaseSubName: Full=Putative Biotin--acetyl-CoA-carboxylase ligase; EC=6.3.4.15; chromosome CDS411342 750 + 0.284
CobN PMM0879 cobalamin biosynthetic protein CobNSubName: Full=Cobalamin biosynthetic protein CobN; chromosome CDS837180 3738 + 0.277689
CobS PMM0270 Cobalamin-5-phosphate synthase CobSRecName: Full=Cobalamin synthase; EC=2.-.-.-; chromosome CDS259957 741 - 0.288799
Dxs PMM0907 1-deoxy-D-xylulose 5-phosphate synthaseRecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; EC=2.2.1.7; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS; chromosome CDS867518 1914 - 0.353187
ahcY, sahH PMM1625 putative adenosylhomocysteinaseRecName: Full=Adenosylhomocysteinase; EC=3.3.1.1; AltName: Full=S-adenosyl-L-homocysteine hydrolase; Short=AdoHcyase; chromosome CDS1553422 1419 - 0.342495
bioF PMM1468 putative 8-amino-7-oxononanoate synthaseSubName: Full=Putative 8-amino-7-oxononanoate synthase; EC=2.3.1.47; chromosome CDS1403281 1146 + 0.328098
cbiA,cobB PMM1072 putative Cobyrinic acid a,c-diamide synthaseSubName: Full=Putative Cobyrinic acid a,c-diamide synthase; chromosome CDS1013873 1395 - 0.298208
cbiG/cobJ fusion PMM1525 bifunctional cbiH protien and PRECORRIN-3B C17-METHYLTRANSFERASESubName: Full=Bifunctional cbiH protien and PRECORRIN-3B C17-METHYLTRANSFERASE; EC=2.1.1.131; chromosome CDS1466807 1821 + 0.317957
chlD PMM0288 Protoporphyrin IX Magnesium chelatase, ChlD subunitSubName: Full=Protoporphyrin IX Magnesium chelatase, ChlD subunit; chromosome CDS277171 2163 + 0.367545
chlG PMM0428 chlorophyll synthase 33 kD subunitSubName: Full=Chlorophyll synthase 33 kD subunit; chromosome CDS408023 948 - 0.347046
chlH PMM0831 protoporphyrin IX magnesium chelatase, subunit chlHSubName: Full=Protoporphyrin IX magnesium chelatase, subunit chlH; chromosome CDS786182 4008 - 0.344311
chlI PMM1055 Protoporphyrin IX Magnesium chelatase, ChlI subunitSubName: Full=Protoporphyrin IX Magnesium chelatase, ChlI subunit; chromosome CDS996449 1089 - 0.365473
chlM PMM0168 Mg-protoporphyrin IX methyltransferaseSubName: Full=Mg-protoporphyrin IX methyltransferase; EC=2.1.1.11; chromosome CDS162339 702 + 0.303419
coaD PMM0884 putative pantetheine-phosphate adenylyltransferaseRecName: Full=Phosphopantetheine adenylyltransferase; EC=2.7.7.3; AltName: Full=Dephospho-CoA pyrophosphorylase; AltName: Full=Pantetheine-phosphate adenylyltransferase; Short=PPAT; chromosome CDS844742 480 + 0.285417
coaE PMM0049 putative dephospho-CoA kinaseRecName: Full=Dephospho-CoA kinase; EC=2.7.1.24; AltName: Full=Dephosphocoenzyme A kinase; chromosome CDS52148 615 - 0.265041
cobA PMM1694 putative uroporphyrin-III C-methyltransferaseSubName: Full=Putative uroporphyrin-III C-methyltransferase; EC=2.1.1.107; chromosome CDS1628322 786 - 0.332061
cobB PMM1160 Cobyric acid synthase CobBRecName: Full=Cobyric acid synthase; chromosome CDS1110791 1530 + 0.310458
cobD PMM1316 putative cobalamin biosynthetic proteinRecName: Full=Cobalamin biosynthesis protein CobD; chromosome CDS1269105 1014 + 0.272189
cobH PMM1646 putative Precorrin-8X methylmutase CobHSubName: Full=Putative Precorrin-8X methylmutase CobH; EC=5.4.1.2; chromosome CDS1574530 624 - 0.317308
cobI/cbiL PMM0389 PRECORRIN-2 C20-METHYLTRANSFERASESubName: Full=PRECORRIN-2 C20-METHYLTRANSFERASE; EC=2.1.1.130; Flags: Precursor; chromosome CDS369683 756 + 0.301587
cobL PMM1268 putative precorrin-6y methylaseSubName: Full=Putative precorrin-6y methylase; EC=2.1.1.132; chromosome CDS1221805 1281 + 0.283372
cobM PMM0459 PUTATIVE PRECORRIN-4 C11-METHYLTRANSFERASESubName: Full=PUTATIVE PRECORRIN-4 C11-METHYLTRANSFERASE; EC=2.1.1.133; chromosome CDS438164 756 - 0.330688
cobO PMM0523 possible cob(I)alamin adenosyltransferaseSubName: Full=Possible cob(I)alamin adenosyltransferase; EC=2.5.1.17; chromosome CDS494294 696 - 0.324713
cobU/cobP PMM0863 putative cobinamide kinaseSubName: Full=Putative cobinamide kinase; chromosome CDS820814 549 - 0.311475
crtE PMM1070 Polyprenyl synthetaseSubName: Full=Polyprenyl synthetase; EC=2.5.1.29; chromosome CDS1012480 903 + 0.380952
cysH PMM0081 Phosphoadenosine phosphosulfate reductaseSubName: Full=Phosphoadenosine phosphosulfate reductase; EC=1.8.4.8; chromosome CDS85958 723 - 0.319502
dfp (coaBC) PMM0229 putative p-pantothenate cysteine ligase and p-pantothenenoylcysteine decarboxylaseSubName: Full=Putative p-pantothenate cysteine ligase and p-pantothenenoylcysteine decarboxylase; chromosome CDS223922 1257 - 0.290374
folB PMM0591 Possible dihydroneopterin aldolaseSubName: Full=Possible dihydroneopterin aldolase; EC=4.1.2.25; chromosome CDS559522 363 + 0.242424
folC PMM1302 putuative bifunctional Dihydrofolate/Folylpolyglutamate synthaseSubName: Full=Putuative bifunctional Dihydrofolate/Folylpolyglutamate synthase; EC=6.3.2.12; EC=6.3.2.17; chromosome CDS1254268 1233 + 0.29116
folD PMM1069 putuative bifunctional Methylenetetrahydrofolate dehydrogenase Methenyltetrahydrofolate/cyclohydrolaseRecName: Full=Bifunctional protein FolD; Includes: RecName: Full=Methylenetetrahydrofolate dehydrogenase; EC=1.5.1.5; Includes: RecName: Full=Methenyltetrahydrofolate cyclohydrolase; EC=3.5.4.9; chromosome CDS1011546 897 + 0.313266
folE PMM0536 putative GTP cyclohydrolase ISubName: Full=Putative GTP cyclohydrolase I; EC=3.5.4.16; chromosome CDS507372 741 + 0.338731
folK PMM0287 possible2-amino-4-hydroxy-6-hydroxymethyldihydro pteridinepyrophosphokinaseSubName: Full=Possible 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; EC=2.7.6.3; chromosome CDS276559 564 - 0.315603
folP PMM0830 putative dihydropteroate synthaseSubName: Full=Putative dihydropteroate synthase; EC=2.5.1.15; chromosome CDS785324 843 + 0.308422
gshB PMM0178 putative Glutathione synthetaseRecName: Full=Glutathione synthetase; EC=6.3.2.3; AltName: Full=GSH synthetase; Short=GSH-S; Short=GSHase; AltName: Full=Glutathione synthase; chromosome CDS172160 924 - 0.327922
hemA PMM0768 glutamyl-tRNA reductaseRecName: Full=Glutamyl-tRNA reductase; Short=GluTR; EC=1.2.1.70; chromosome CDS731453 1302 + 0.327957
hemC PMM0495 Porphobilinogen deaminaseRecName: Full=Porphobilinogen deaminase; Short=PBG; EC=2.5.1.61; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase; chromosome CDS468018 951 - 0.333333
hemD PMM0113 putative uroporphyrinogen III synthaseSubName: Full=Putative uroporphyrinogen III synthase; EC=4.2.1.75; chromosome CDS113674 810 + 0.319753
hemE PMM0583 Uroporphyrinogen decarboxylase (URO-D)RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD; Short=URO-D; EC=4.1.1.37; chromosome CDS547878 1041 - 0.349664
hemF PMM1582 Coproporphyrinogen III oxidaseRecName: Full=Oxygen-dependent coproporphyrinogen-III oxidase; Short=CPO; Short=Coprogen oxidase; Short=Coproporphyrinogenase; EC=1.3.3.3; chromosome CDS1512865 1029 + 0.332362
hemL, gsa PMM0483 glutamate-1-semialdehyde 2,1-aminomutaseRecName: Full=Glutamate-1-semialdehyde 2,1-aminomutase; Short=GSA; EC=5.4.3.8; AltName: Full=Glutamate-1-semialdehyde aminotransferase; Short=GSA-AT; chromosome CDS456638 1302 - 0.389401
ilvC PMM1315 Ketol-acid reductoisomeraseRecName: Full=Ketol-acid reductoisomerase; EC=1.1.1.86; AltName: Full=Acetohydroxy-acid isomeroreductase; AltName: Full=Alpha-keto-beta-hydroxylacyl reductoisomerase; chromosome CDS1268128 990 + 0.343434
ilvE PMM0878 putative Branched-chain amino acid aminotransferaseSubName: Full=Putative Branched-chain amino acid aminotransferase; EC=2.6.1.42; chromosome CDS836194 915 - 0.327869
ilvH PMM0526 Acetolactate synthase large subunitRecName: Full=Acetolactate synthase; EC=2.2.1.6; chromosome CDS497565 1764 + 0.384921
lipA PMM1514 lipoic acid synthetaseRecName: Full=Lipoyl synthase 1; EC=2.8.1.8; AltName: Full=Lip-syn 1; AltName: Full=Lipoate synthase 1; AltName: Full=Lipoic acid synthase 1; AltName: Full=Sulfur insertion protein lipA1; chromosome CDS1455800 894 - 0.326622
lipA,lip PMM1096 Lipoate synthaseRecName: Full=Lipoyl synthase 2; EC=2.8.1.8; AltName: Full=Lip-syn 2; AltName: Full=Lipoate synthase 2; AltName: Full=Lipoic acid synthase 2; AltName: Full=Sulfur insertion protein lipA2; chromosome CDS1040819 900 - 0.32
lipB PMM0401 putative lipoate-protein ligase BRecName: Full=Octanoyltransferase; EC=2.3.1.181; AltName: Full=Lipoate-protein ligase B; AltName: Full=Lipoyl/octanoyl transferase; AltName: Full=Octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase; chromosome CDS379082 645 + 0.27907
menA PMM0176 1,4-dihydroxy-2-naphthoate (DHNA) octaprenyltransferase; UbiA prenyltranferase familySubName: Full=1,4-dihydroxy-2-naphthoate (DHNA) octaprenyltransferase UbiA prenyltranferase family; EC=2.5.1.-; chromosome CDS169751 918 - 0.295207
menB PMM0608 Napthoate synthaseSubName: Full=Napthoate synthase; EC=4.1.3.36; chromosome CDS577662 858 + 0.389277
menD PMM0607 Menaquinone biosynthesis protein; probable 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthaseRecName: Full=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase; Short=SEPHCHC synthase; EC=2.2.1.9; AltName: Full=Menaquinone biosynthesis protein MenD; chromosome CDS575865 1767 + 0.276174
menF PMM0177 Isochorismate synthaseSubName: Full=Isochorismate synthase; EC=5.4.99.6; chromosome CDS170770 1398 + 0.276109
metK PMM0311 S-adenosylmethionine synthetaseRecName: Full=S-adenosylmethionine synthase; Short=AdoMet synthase; EC=2.5.1.6; AltName: Full=MAT; AltName: Full=Methionine adenosyltransferase; chromosome CDS297783 1242 - 0.356683
nadB PMM0100 L-aspartate oxidaseSubName: Full=L-aspartate oxidase; EC=1.4.3.16; chromosome CDS103324 1668 + 0.348921
nadC PMM0188 Nicotinate-nucleotide pyrophosphorylase:Quinolinate phosphoriobsyl transferaseSubName: Full=Nicotinate-nucleotide pyrophosphorylase:Quinolinate phosphoriobsyl transferase; EC=2.4.2.19; chromosome CDS180017 867 - 0.282584
pabA PMM0184 para-aminobenzoate synthase component IISubName: Full=Para-aminobenzoate synthase component II; EC=4.1.3.-; chromosome CDS175726 597 + 0.318258
panB PMM1310 putative Ketopantoate hydroxymethyltransferaseRecName: Full=3-methyl-2-oxobutanoate hydroxymethyltransferase; EC=2.1.2.11; AltName: Full=Ketopantoate hydroxymethyltransferase; Short=KPHMT; chromosome CDS1263472 774 + 0.341085
panC, cmk PMM1590 putative bifunctional enzyme; pantothenate synthetase/cytidylate kinaseRecName: Full=Bifunctional pantoate ligase/cytidylate kinase; Includes: RecName: Full=Pantoate--beta-alanine ligase; EC=6.3.2.1; AltName: Full=Pantoate-activating enzyme; AltName: Full=Pantothenate synthetase; Includes: RecName: Full=Cytidylate kinase; Short=CK; EC=2.7.4.14; AltName: Full=Cytidine monophosphate kinase; Short=CMP kinase; chromosome CDS1519318 1533 + 0.292237
pdxA PMM0028 putative pyridoxal phosphate biosynthetic protein PdxARecName: Full=4-hydroxythreonine-4-phosphate dehydrogenase; EC=1.1.1.262; AltName: Full=4-(phosphohydroxy)-L-threonine dehydrogenase; chromosome CDS28330 1041 - 0.316042
pdxJ PMM1107 Pyridoxal phosphate biosynthetic protein PdxJRecName: Full=Pyridoxine 5-phosphate synthase; Short=PNP synthase; EC=2.6.99.2; chromosome CDS1056323 717 - 0.327755
psbO PMM0228 Photosystem II manganese-stabilizing proteinSubName: Full=Photosystem II manganese-stabilizing protein; Flags: Precursor; chromosome CDS222913 795 - 0.357233
ribA/ribB PMM0893 possible GTP cyclohydrolase II / 3,4-dihydroxy-2-butanone 4-phosphate synthaseRecName: Full=Riboflavin biosynthesis protein RibBA; chromosome CDS855364 1734 + 0.319492
ribD PMM1265 putative Diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino)uracil reductaseRecName: Full=Riboflavin biosynthesis protein RibD; chromosome CDS1219892 1089 - 0.332415
ribE PMM0442 Putative Riboflavin synthase alpha chainSubName: Full=Putative Riboflavin synthase alpha chain; EC=2.5.1.9; chromosome CDS421761 660 + 0.306061
ribF PMM1273 putative riboflavin kinase/FAD synthaseSubName: Full=Putative riboflavin kinase/FAD synthase; EC=2.7.1.26; EC=2.7.7.2; chromosome CDS1226538 924 + 0.322511
ribG PMM0105 RibD/ribG C-terminal domainSubName: Full=RibD/ribG C-terminal domain; chromosome CDS109169 663 - 0.289593
ribH PMM1643 Putative 6,7-dimethyl-8-ribityllumazine synthase or riboflavin synthase beta chainRecName: Full=6,7-dimethyl-8-ribityllumazine synthase; Short=DMRL synthase; Short=LS; Short=Lumazine synthase; EC=2.5.1.78; chromosome CDS1570887 477 - 0.314465
sds PMM0618 polyprenyl synthetase; solanesyl diphosphate synthase (sds)SubName: Full=Polyprenyl synthetase solanesyl diphosphate synthase (Sds); EC=2.5.1.11; chromosome CDS588631 972 + 0.343621
serA PMM1354 putative D-3-phosphoglycerate dehydrogenase (PGDH)SubName: Full=Putative D-3-phosphoglycerate dehydrogenase (PGDH); EC=1.1.1.95; chromosome CDS1303160 1587 - 0.36799
thiC PMM1611 ThiC familyRecName: Full=Phosphomethylpyrimidine synthase; EC=4.1.99.17; AltName: Full=Hydroxymethylpyrimidine phosphate synthase; Short=HMP-P synthase; Short=HMP-phosphate synthase; Short=HMPP synthase; AltName: Full=Thiamine biosynthesis protein ThiC; chromosome CDS1541758 1371 - 0.366885
thiD PMM0358 Phosphomethylpyrimidine kinaseSubName: Full=Phosphomethylpyrimidine kinase; EC=2.7.4.7; chromosome CDS342256 789 + 0.332066
thiE PMM1274 Thiamine monophosphate synthase (TMP)RecName: Full=Thiamine-phosphate synthase; Short=TP synthase; Short=TPS; EC=2.5.1.3; AltName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP pyrophosphorylase; Short=TMP-PPase; chromosome CDS1227470 1056 + 0.303977
thiG PMM1664 thiamin biosynthesis proteinRecName: Full=Thiazole synthase; EC=2.8.1.10; chromosome CDS1595645 798 + 0.340852
thiL PMM0024 putative thiamine-monophosphate kinaseSubName: Full=Putative thiamine-monophosphate kinase; EC=2.7.4.16; chromosome CDS25173 987 - 0.299899
trpE PMM1577 Anthranilate synthase component I and chorismate binding enzymeSubName: Full=Anthranilate synthase component I and chorismate binding enzyme; EC=4.1.3.27; chromosome CDS1506880 1521 - 0.326759
ubiA PMM0456 probable 4-hydroxybenzoate-octaprenyltransferaseSubName: Full=Probable 4-hydroxybenzoate-octaprenyltransferase; EC=2.5.1.-; chromosome CDS435011 888 - 0.29955
ubiH PMM0834 possible 2-octaprenyl-6-methoxyphenol 4-monoxygenase; UbiHSubName: Full=Possible 2-octaprenyl-6-methoxyphenol 4-monoxygenase UbiH; EC=1.14.13.-; chromosome CDS791807 1155 + 0.249351