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2024-05-05 01:17:07

Gene list

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COG category: Coenzyme transport and metabolism
Organism: Methylococcus capsulatus str. Bath, Bath

Number of genes found: 135

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Methylococcus capsulatus str. Bath, Bath
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA MCA2211 HesA/MoeB/ThiF family proteinchromosome CDS2386201 747 + 0.677376
NA MCA2293 precorrin-3B C17-methyltransferase/conserved domain proteinchromosome CDS2487502 1377 - 0.688453
NA MCA2865 ATP:dephospho-CoA triphosphoribosyl transferasechromosome CDS3059093 867 + 0.644752
NA MCA0508 methylenetetrahydromethanopterin dehydrogenase/methylenetetrahydrofolate dehydrogenasechromosome CDS521192 861 + 0.646922
NA MCA1903 conserved hypothetical proteinchromosome CDS2049126 495 - 0.626263
NA MCA1678 putative nucleotide pyrophosphorylasechromosome CDS1789349 921 - 0.648208
NA MCA0049 cellulose-binding domain proteinchromosome CDS48224 2223 + 0.653621
NA MCA2864 putative ribosomal protein S6 modification proteinchromosome CDS3058170 927 + 0.678533
NA MCA3062 putative hemY proteinchromosome CDS3248013 1275 + 0.647059
NA MCA0724 monooxygenase, FAD-bindingchromosome CDS762597 1386 - 0.634199
NA MCA0335 conserved hypothetical proteinchromosome CDS329353 3696 - 0.639069
NA MCA2968 putative D-isomer specific 2-hydroxyacid dehydrogenase family proteinchromosome CDS3143156 969 + 0.641899
NA MCA2564 putative prenyltransferase, UbiA familychromosome CDS2746761 891 - 0.62514
NA MCA2546 conserved domain proteinchromosome CDS2726241 843 - 0.552788
NA MCA2773 5-formyltetrahydrofolate cyclo-ligase family proteinchromosome CDS2966224 666 + 0.648649
NA MCA1522 4'-phosphopantetheinyltransferase family proteinchromosome CDS1624934 810 + 0.665432
NA MCA0232 ferredoxin, 2Fe-2Schromosome CDS230591 369 + 0.639566
NA MCA1407 D-isomer specific 2-hydroxyacid dehydrogenase family proteinchromosome CDS1494241 972 + 0.613169
NA MCA1335 putative chorismate--pyruvate lyasechromosome CDS1420237 489 + 0.683027
NA MCA2872 monooxygenase family proteinchromosome CDS3065450 1350 - 0.639259
NA MCA1245 pterin-binding domain proteinchromosome CDS1319764 1398 - 0.653076
NA MCA2863 putative n5,n10-methenyltetrahydromethanopterin cyclohydrolasechromosome CDS3057182 996 + 0.619478
NA MCA0629 putative phosphomethylpyrimidine kinasechromosome CDS666613 873 - 0.680412
NA MCA1419 hypothetical proteinchromosome CDS1505539 453 - 0.651214
NA MCA2411 putative thiamine biosynthesis lipoprotein ApbEchromosome CDS2588050 933 + 0.673098
NA MCA2760 putative nicotinate phosphoribosyltransferasechromosome CDS2954370 1350 - 0.668889
NA MCA0996 decarboxylase, thiamine pyrophosphate enzyme familychromosome CDS1041536 1650 + 0.683636
NA MCA2295 precorrin-2 C20-methyltransferasechromosome CDS2489997 834 - 0.672662
NA MCA1813 putatives-adenosylmethionine:2-demethylmenaquino nemethyltransferasechromosome CDS1946532 486 + 0.654321
NA MCA3079 putative oxygen-independent coproporphyrinogen III oxidasechromosome CDS3263893 1143 + 0.658793
NA MCA1754 monooxygenase, FAD-bindingchromosome CDS1874827 1218 - 0.659277
NA MCA2527 putative 6-pyruvoyl tetrahydropterin synthasechromosome CDS2702635 414 + 0.625604
NA MCA0106 putative D-amino acid aminotransferasechromosome CDS113538 852 + 0.676056
NA MCA1164 methyltransferase domain proteinchromosome CDS1221559 453 + 0.653422
NA MCA3063 conserved hypothetical protein TIGR00148chromosome CDS3249296 1497 - 0.639947
NA MCA2029 conserved domain proteinchromosome CDS2178592 741 + 0.568151
NA MCA1957 putative TonB-dependent receptorchromosome CDS2109113 1917 + 0.622848
NA MCA1132 conserved hypothetical proteinchromosome CDS1188873 1497 + 0.661323
NA MCA1870 ribD C-terminal domain proteinchromosome CDS2010202 846 + 0.6513
NA MCA2476 riboflavin-specific deaminase/GTP cyclohydrolase IIchromosome CDS2654193 1068 - 0.664794
NA MCA2508 putative oxygenasechromosome CDS2684153 975 + 0.629744
ahcY MCA0138 adenosylhomocysteinasechromosome CDS142710 1419 - 0.650458
apbE MCA0129 thiamin biosynthesis lipoprotein ApbEchromosome CDS134125 1086 - 0.63628
bioA MCA0017 adenosylmethionine--8-amino-7-oxononanoateaminot ransferasechromosome CDS16626 1356 + 0.682153
bioB MCA1125 biotin synthetasechromosome CDS1181717 1002 + 0.647705
bioD MCA1129 dethiobiotin synthetasechromosome CDS1185467 687 + 0.646288
bioF MCA1126 8-amino-7-oxononanoate synthasechromosome CDS1182724 1164 + 0.695876
birA MCA1781 birA bifunctional proteinchromosome CDS1911115 996 - 0.677711
cbiD MCA2297 cobalamin biosynthesis protein CbiDchromosome CDS2492228 1146 - 0.679756
coaBC MCA2784 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligasechromosome CDS2975780 1263 - 0.680127
coaD MCA0066 pantetheine-phosphate adenylyltransferasechromosome CDS67724 489 + 0.629857
coaE MCA2093 dephospho-CoA kinasechromosome CDS2249959 597 - 0.700167
cobA MCA2291 cob(I)alamin adenosyltransferasechromosome CDS2486564 603 - 0.679934
cobB MCA2290 cobyrinic acid a,c-diamide synthasechromosome CDS2485278 1290 - 0.709302
cobD MCA2287 cobalamin biosynthesis protein CobDchromosome CDS2482686 942 + 0.676221
cobH MCA2298 precorrin-8X methylmutasechromosome CDS2493381 660 - 0.706061
cobL MCA2296 precorrin-6Y C5,15-methyltransferase (decarboxylating)chromosome CDS2490911 1284 - 0.693925
cobM MCA2300 precorrin-4 C11-methyltransferasechromosome CDS2494885 822 - 0.698297
cobQ MCA2304 cobyric acid synthase CobQchromosome CDS2498013 1518 + 0.668643
cobS MCA0465 cobalamin 5'-phosphate synthasechromosome CDS481410 693 + 0.721501
cobT MCA0463 nicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferasechromosome CDS479756 1041 + 0.73391
cobU MCA0462 bifunctional cobalamin biosynthesis protein CobUchromosome CDS479172 588 + 0.693878
cysD MCA2629 sulfate adenylyltransferase, subunit 2chromosome CDS2816780 909 - 0.618262
cysG MCA2089 siroheme synthasechromosome CDS2247424 1425 + 0.677895
cysH MCA2468 phosophoadenylyl-sulfate reductasechromosome CDS2645860 723 + 0.634855
dxs MCA0817 1-deoxy-D-xylulose-5-phosphate synthasechromosome CDS858569 1920 - 0.653125
folA MCA2729 dihydrofolate reductasechromosome CDS2922594 519 + 0.666667
folB MCA2988 dihydroneopterin aldolasechromosome CDS3162071 366 - 0.587432
folC MCA2492 folylpolyglutamate synthase/dihydrofolate synthasechromosome CDS2673335 1296 - 0.654321
folE MCA1670 GTP cyclohydrolase Ichromosome CDS1773965 558 + 0.587814
folK-1 MCA2313 2-amino-4-hydroxy-6-hydroxymethyldihydropteridin epyrophosphokinasechromosome CDS2507044 498 + 0.674699
folK-2 MCA2987 2-amino-4-hydroxy-6-hydroxymethyldihydropteridin epyrophosphokinasechromosome CDS3161584 495 - 0.614141
folP MCA2317 dihydropteroate synthasechromosome CDS2509686 885 - 0.687006
gshA MCA2467 glutamate--cysteine ligasechromosome CDS2644302 1530 + 0.618954
gshB MCA2338 glutathione synthetasechromosome CDS2531910 969 - 0.624355
hemA MCA1052 glutamyl-tRNA reductasechromosome CDS1102282 1263 - 0.635788
hemB MCA2793 delta-aminolevulinic acid dehydratasechromosome CDS2983971 1005 + 0.657711
hemC MCA3060 porphobilinogen deaminasechromosome CDS3244910 1056 + 0.661932
hemDX MCA3061 uroporphyrinogen-III synthase/uroporphyrin-III C-methyltransferasechromosome CDS3245998 2019 + 0.658247
hemE MCA0332 uroporphyrinogen decarboxylasechromosome CDS327389 1053 + 0.654321
hemF MCA2791 coproporphyrinogen III oxidase, aerobicchromosome CDS2982291 915 + 0.631694
hemH MCA1671 ferrochelatasechromosome CDS1774527 978 + 0.625767
hemL MCA0054 glutamate-1-semialdehyde-2,1-aminomutasechromosome CDS54127 1281 + 0.660422
hemN MCA0115 oxygen-independent coproporphyrinogen III oxidasechromosome CDS121147 1398 - 0.653791
ilvB MCA2270 acetolactate synthase, large subunit, biosynthetic typechromosome CDS2466156 1731 + 0.62565
ilvC MCA2272 ketol-acid reductoisomerasechromosome CDS2468442 1017 + 0.622419
ilvE MCA2344 branched-chain amino acid aminotransferasechromosome CDS2536132 921 - 0.603692
ilvK MCA1837 acetolactate synthasechromosome CDS1965508 1662 + 0.690734
ispA MCA0818 geranyltranstransferasechromosome CDS860628 903 - 0.655592
ispB MCA2996 octaprenyl-diphosphate synthasechromosome CDS3169214 1023 - 0.601173
lipA MCA0110 lipoic acid synthetasechromosome CDS116816 969 + 0.689371
lipB MCA0109 lipoate-protein ligase Bchromosome CDS116196 624 + 0.679487
metK-1 MCA0139 S-adenosylmethionine synthetasechromosome CDS144326 1170 - 0.644444
metK-2 MCA0450 S-adenosylmethionine synthetasechromosome CDS465329 1194 + 0.659129
mmoC MCA1200 methane monooxygenase, C subunitchromosome CDS1257758 1047 + 0.626552
moaA MCA1949 molybdenum cofactor biosynthesis protein Achromosome CDS2095708 1032 - 0.659884
moaB MCA2156 molybdenum cofactor biosynthesis protein Bchromosome CDS2323620 519 + 0.65896
moaC MCA2730 molybdenum cofactor biosynthesis protein Cchromosome CDS2923067 504 - 0.660714
moaD MCA3054 molybdopterin converting factor, subunit 1chromosome CDS3242212 234 + 0.641026
moaE MCA3055 molybdopterin converting factor, subunit 2chromosome CDS3242447 456 + 0.642544
mobA MCA1945 molybdopterin-guanine dinucleotide biosynthesis protein Achromosome CDS2092962 609 - 0.648604
mobB MCA2450 molybdopterin-guanine dinucleotide biosynthesis protein MobBchromosome CDS2631278 552 + 0.61413
moeA MCA1567 molybdopterin biosynthesis MoeA proteinchromosome CDS1666411 1266 - 0.660348
nadA MCA0376 quinolinate synthetase complex, subunit Achromosome CDS378759 1170 + 0.64188
nadB MCA1472 L-aspartate oxidasechromosome CDS1562203 1602 + 0.643571
nadC MCA3101 nicotinate-nucleotide pyrophosphorylasechromosome CDS3287761 843 - 0.650059
nadD MCA1879 nicotinate (nicotinamide) nucleotide adenylyltransferasechromosome CDS2020101 633 - 0.658768
pabB MCA2870 para-aminobenzoate synthase, component Ichromosome CDS3063449 1407 + 0.657427
pabC MCA1998 4-amino-4-deoxychorismate lyasechromosome CDS2147198 831 - 0.624549
panB MCA2314 3-methyl-2-oxobutanoate hydroxymethyltransferasechromosome CDS2507534 810 + 0.669136
panC MCA2315 pantoate--beta-alanine ligasechromosome CDS2508340 861 + 0.641115
panD MCA2316 aspartate 1-decarboxylasechromosome CDS2509301 381 + 0.614173
panE MCA2523 2-dehydropantoate 2-reductasechromosome CDS2698700 939 + 0.641108
pdxA MCA0603 pyridoxal phosphate biosynthetic protein PdxAchromosome CDS638122 993 + 0.679758
pdxJ MCA1667 pyridoxal phosphate biosynthetic protein PdxJchromosome CDS1771085 744 + 0.651882
phhB MCA0497 pterin-4-alpha-carbinolamine dehydratasechromosome CDS513153 345 - 0.608696
pqqC MCA1447 coenzyme PQQ synthesis protein Cchromosome CDS1539216 726 + 0.597796
ribBA MCA1656 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase IIchromosome CDS1758912 1116 - 0.634409
ribD MCA1658 riboflavin biosynthesis protein RibDchromosome CDS1760717 1137 - 0.672823
ribE MCA1655 6,7-dimethyl-8-ribityllumazine synthasechromosome CDS1758420 480 - 0.629167
ribE-1 MCA1657 riboflavin synthase, alpha subunitchromosome CDS1760024 660 - 0.642424
ribE-2 MCA1865 riboflavin synthase, alpha subunitchromosome CDS2006185 657 + 0.675799
ribF MCA2252 riboflavin biosynthesis protein RibFchromosome CDS2441096 930 + 0.646237
serC MCA1420 phosphoserine aminotransferasechromosome CDS1506034 1083 - 0.640813
thiC MCA2710 thiamin biosynthesis protein ThiCchromosome CDS2895662 1875 + 0.641067
thiE MCA2999 thiamine-phosphate pyrophosphorylasechromosome CDS3172903 675 + 0.677037
thiL MCA1653 thiamine-monophosphate kinasechromosome CDS1756835 978 - 0.655419
thiS MCA1077 thiamine biosynthesis protein ThiSchromosome CDS1132992 981 + 0.649337
trpE MCA2584 anthranilate synthase component Ichromosome CDS2767812 1488 + 0.672043
trpG MCA2585 anthranilate synthase component IIchromosome CDS2769296 588 + 0.630952
ubiA MCA1336 4-hydroxybenzoate octaprenyltransferasechromosome CDS1420722 879 + 0.633675
ubiE MCA2017 ubiquinone/menaquinone biosynthesis methlytransferase UbiEchromosome CDS2165781 747 + 0.603748
ubiG MCA1272 3-demethylubiquinone-9 3-methyltransferasechromosome CDS1355590 714 - 0.662465
ubiH MCA2769 2-octaprenyl-6-methoxyphenol hydroxylasechromosome CDS2962532 1206 - 0.686567
ubiX MCA1240 3-octaprenyl-4-hydroxybenzoate carboxy-lyasechromosome CDS1316654 594 + 0.678451