TitleGenColors Logo
spacer
Home spacerGenomes
spacerMethods
spacerDocumentation spacerContactspacer spacerLeibniz FLI
spacer
QuickSearch
2024-05-03 19:01:57

Gene list

Applied filters:

COG category: Coenzyme transport and metabolism
Organism: Pseudoalteromonas haloplanktis TAC125, TAC125

Number of genes found: 116

Free access
Sort by:

 

Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Pseudoalteromonas haloplanktis TAC125, TAC125
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA PSHAa1493 conserved protein of unknown functionchromosome I CDS1570034 858 + 0.385781
NA PSHAa0546 putative cobalamin biosynthesis proteinchromosome I CDS560414 945 - 0.386243
NA PSHAa2153 putative dehydrogenasechromosome I CDS2279412 921 - 0.411509
NA PSHAa0700 putative p-aminobenzoyl-glutamate transport protein (AbgT family)chromosome I CDS728231 1602 + 0.442572
NA PSHAa2960 putative inner membrane proteinchromosome I CDS3142168 615 - 0.370732
NA PSHAa0332 putative orphan proteinchromosome I CDS345021 774 + 0.426357
NA PSHAa2298 putative aromatic acid decarboxylasechromosome I CDS2442860 525 - 0.441905
NA PSHAb0097 putative enzyme proteinchromosome II CDS115021 1668 - 0.394484
NA PSHAa2279 putative 2-dehydropantoate reductasechromosome I CDS2423580 903 + 0.369878
NA PSHAa2275 putative TonB-dependent Outer membrane receptorchromosome I CDS2420288 1851 - 0.394381
NA PSHAa1656 putative Molybdenum cofactor biosynthesis protein MoeB, NAD(P)-bindingchromosome I CDS1724920 807 - 0.405204
NA PSHAa0668 putative carbon-nitrogen ligasechromosome I CDS695722 597 - 0.393635
NA PSHAa2301 putative phosphokinasechromosome I CDS2445866 438 - 0.436073
NA PSHAa1114 conserved protein of unknown functionchromosome I CDS1160747 243 - 0.341564
NA PSHAa2311 putative chorismate pyruvate lyase UbiCchromosome I CDS2452843 546 - 0.397436
NA PSHAa0989 putative transporterchromosome I CDS1022813 1557 + 0.41747
NA PSHAa1251 putative orphan proteinchromosome I CDS1305585 744 - 0.389785
NA PSHAa2431 putative transporter proteinchromosome I CDS2582817 657 - 0.371385
NA PSHAa2619 2-hydroxyacid dehydrogenase family proteinchromosome I CDS2768027 945 + 0.403175
NA PSHAa1377 conserved protein of unknown functionchromosome I CDS1441693 1395 + 0.401434
NA PSHAb0443 putative transport proteinchromosome II CDS504081 1626 - 0.426199
apbE PSHAa2235 putative lipoprotein involved in thiamin biosynthesis via the alternative pyrimidine biosynthetic pathwaychromosome I CDS2374122 1032 - 0.405039
bioA PSHAa1610 adenosylmethionine-8-amino-7-oxononanoate aminotransferase (7,8-diaminopelargonic acid synthetase), PLP-dependentchromosome I CDS1672478 1437 + 0.434238
bioB PSHAa1609 biotin synthase; contains an iron-sulfur cluster and PLPchromosome I CDS1671473 1041 - 0.443804
bioD PSHAa1606 desthiobiotin synthetasechromosome I CDS1668649 684 - 0.418129
bioF PSHAa1608 8-amino-7-oxononanoate synthase (7-keto-8-aminopelargonic acid synthetase)chromosome I CDS1670263 1152 - 0.434896
birA PSHAa2913 biotin-[protein] holoenzyme synthetase; possibly (by homology) transcriptional repressor of biotin synthesis (BirA family)chromosome I CDS3081934 993 - 0.433031
btuR PSHAa2563 cob(I)alamin and cobinamide ATP-dependent adenolsyltransferasechromosome I CDS2709290 600 - 0.45
coaD PSHAa2282 Phosphopantetheine adenylyltransferase (PPAT) (Dephospho-CoA pyrophosphorylase)chromosome I CDS2426894 495 + 0.375758
coaE PSHAa0379 dephospho-CoA kinasechromosome I CDS395169 633 - 0.409163
cobQ PSHAa2564 cobyric acid synthasechromosome I CDS2709873 1479 - 0.41785
cobS PSHAa2998 cobalamin 5'-phosphate synthasechromosome I CDS3186633 825 - 0.396364
cobT PSHAa2999 nicotinate-nucleotide dimethylbenzimidazole-P phophoribosyl transferasechromosome I CDS3187459 1062 - 0.421846
cobU PSHAa2997 bifunctional adenosylcobalamin biosynthesis protein cobU [Includes: Adenosylcobinamide kinase ; Adenosylcobinamide-phosphate guanylyltransferase ]chromosome I CDS3186109 528 - 0.422348
cysD PSHAa0212 ATP-sulfurylase, subunit 2 (ATP:sulfate adenylyltransferase)chromosome I CDS220260 900 - 0.441111
cysG PSHAa0213 multifunctional siroheme synthase: uroporphyrinogen methyltransferase; 1, 3-dimethyluroporphyriongen III dehydrogenase; siroheme ferrochelatasechromosome I CDS221215 1422 - 0.457103
cysH PSHAa0156 3'-phosphoadenosine 5'-phosphosulfate (PAPS) reductasechromosome I CDS165235 741 + 0.412955
dfp PSHAa2644 bifunctional: 4'-phosphopantothenoylcysteine decarboxylase (N); phosphopantothenoylcysteine synthetase (C), FMN-bindingchromosome I CDS2795120 1194 + 0.444724
dxs PSHAa2366 1-deoxy-D-xylulose 5-phosphate synthase (DXP synthase)chromosome I CDS2511101 1863 + 0.433172
fhuC PSHAa2566 putative Iron-compound ABC transporter, ATP-binding proteinchromosome I CDS2712376 813 - 0.405904
folA PSHAa2653 dihydrofolate reductase type I, trimethoprim resistancechromosome I CDS2808343 468 - 0.363248
folB PSHAa2302 dihydroneopterin aldolase (DHNA)chromosome I CDS2446355 360 - 0.394444
folC PSHAa2073 bifunctional: folylpolyglutamate synthase; dihydrofolate synthasechromosome I CDS2192727 1266 - 0.406793
folD PSHAa2064 bifunctional: 5,10-methylene-tetrahydrofolate dehydrogenase; 5,10-methylene-tetrahydrofolate cyclohydrolasechromosome I CDS2184326 855 + 0.421053
folE PSHAa0073 GTP cyclohydrolase Ichromosome I CDS75426 555 - 0.396396
folK PSHAa0603 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinasechromosome I CDS629423 486 - 0.417695
folP PSHAa0871 Dihydropteroate synthase (DHPS) (Dihydropteroate pyrophosphorylase)chromosome I CDS897823 846 + 0.427896
folX PSHAa0072 D-erythro-7,8-dihydroneopterin aldolasechromosome I CDS75066 357 - 0.380952
fre PSHAa0104 NAD(P)H-flavin reductasechromosome I CDS107724 714 - 0.421569
gshA PSHAb0107 Glutamate--cysteine ligase (Gamma-glutamylcysteine synthetase) (Gamma-ECS) (GCS)chromosome II CDS127336 1518 + 0.444664
gshA PSHAa0937 glutamate--cysteine ligase (Gamma-glutamylcysteine synthetase) (Gamma-ECS) (GCS)chromosome I CDS967593 1578 + 0.385298
gshB PSHAa2599 glutathione synthetasechromosome I CDS2744825 951 + 0.414301
hemA PSHAa1057 glutamyl tRNA reductasechromosome I CDS1093821 1266 + 0.421801
hemB PSHAa2935 5-aminolevulinate dehydratase (porphobilinogen synthase)chromosome I CDS3106399 1011 + 0.466864
hemC PSHAa0098 hydroxymethylbilane synthase (porphobilinogen deaminase)chromosome I CDS99281 939 + 0.436635
hemDX PSHAa0099 uroporphyrinogen-III synthase HemD (N terminal)/Uroporphyrin-III C-methyltransferase (C terminal)chromosome I CDS100219 1851 + 0.406267
hemE PSHAa2899 uroporphyrinogen decarboxylasechromosome I CDS3068917 1065 - 0.426291
hemF PSHAa0029 coproporphyrinogen III oxidasechromosome I CDS31394 975 + 0.433846
hemH PSHAb0112 ferrochelatasechromosome II CDS135348 1020 - 0.42549
hemL PSHAa2255 Glutamate-1-semialdehyde 2,1-aminomutase (GSA) (Glutamate-1-semialdehyde aminotransferase)chromosome I CDS2392661 1281 + 0.444965
hemN PSHAa2749 coproporphyrinogen III oxidase, O2-independent, SAM and NAD(P)H dependentchromosome I CDS2920748 1374 + 0.398836
hemY PSHAa0100 putative HemY (Uncharacterized enzyme of heme biosynthesis); by synteny may be involved in heme biosynthesis or transportchromosome I CDS102066 1107 + 0.3785
ilvC PSHAa0849 ketol-acid reductoisomerase (Acetohydroxy-acid isomeroreductase) (Alpha-keto-beta-hydroxylacil reductoisomerase)chromosome I CDS877231 1473 - 0.40869
ilvE PSHAa1270 putative branched-chain amino acid aminotransferasechromosome I CDS1325641 996 + 0.448795
ilvG PSHAa2771 Acetolactate synthase II, large subunitchromosome I CDS2945741 1650 - 0.450909
ilvI PSHAb0464 acetolactate synthase isozyme III large subunitchromosome II CDS521041 1725 - 0.428406
ispA PSHAa2365 geranyltranstransferase (farnesyldiphosphate synthase or FPP synthase)chromosome I CDS2510101 888 + 0.417793
ispB PSHAa2657 Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate synthetase)(OPP synthetase)chromosome I CDS2811304 972 + 0.424897
kbl PSHAa2316 2-amino-3-ketobutyrate CoA ligase ( AKB ligase, glycine acetyltransferase)chromosome I CDS2456243 1194 - 0.409548
lipA PSHAa1019 Lipoyl synthase (Lipoic acid synthase) (Lipoate synthase) (Lipoyl-acyl-carrier protein synthase) (Sulfur insertion protein lipA) (Lip-syn)chromosome I CDS1055847 966 - 0.443064
lipB PSHAa1020 Lipoate-protein ligase Bchromosome I CDS1056809 654 - 0.444954
metK PSHAa0670 methionine adenosyltransferase 1 (AdoMet synthetase)chromosome I CDS697043 1152 - 0.447049
nadA PSHAa1866 quinolinate synthetase, A proteinchromosome I CDS1969158 1041 - 0.45245
nadB PSHAa0725 quinolinate synthetase, B protein (L-aspartate oxidase)chromosome I CDS757162 1608 - 0.429104
nadC PSHAa0386 nicotinate-nucleotide pyrophosphorylasechromosome I CDS400100 846 - 0.400709
nadD PSHAa1028 nicotinic acid mononucleotide adenylyltransferase, NAD(P)-requiringchromosome I CDS1064133 591 - 0.411168
nadE PSHAa0075 NAD synthetasechromosome I CDS76850 837 - 0.433692
pabA PSHAa0192 putative glutamine amidotransferase; putatively involved in paraminobenzoate biosynthesischromosome I CDS203138 582 + 0.396907
pabB PSHAa1165 aminodeoxychorismate synthase subunit I, component of p-aminobenzoate synthase multienzyme complexchromosome I CDS1209790 1341 - 0.41387
pabC PSHAa1805 4-amino-4-deoxychorismate lyase (aminotransferase), component of p-aminobenzoate synthase multienzyme complexchromosome I CDS1894627 825 - 0.38303
panB PSHAa0602 3-methyl-2-oxobutanoate hydroxymethyltransferasechromosome I CDS628598 795 - 0.416352
panC PSHAa0601 pantothenate synthetasechromosome I CDS627750 849 - 0.402827
pdxA PSHAa2634 4-hydroxythreonine-4-phosphatedehydrogenase,(4-( phosphohydroxy)-L-threoninedehydrogenase)chromosome I CDS2787498 993 + 0.435045
pdxB PSHAa2079 erythronate-4-phosphate dehydrogenasechromosome I CDS2201488 1122 - 0.409091
pdxH PSHAa0658 pyridoxine 5'-phosphate oxidasechromosome I CDS684390 639 + 0.442879
pdxJ PSHAa0735 pyridoxine 5'-phosphate (PNP) synthasechromosome I CDS766847 732 + 0.445355
phhB PSHAa2042 Pterin-4-alpha-carbinolamine dehydratasechromosome I CDS2159581 345 - 0.42029
ribA PSHAa0529 GTP cyclohydrolase IIchromosome I CDS544927 624 + 0.387821
ribB PSHAa2372 3,4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase)chromosome I CDS2518690 1113 - 0.431267
ribB PSHAa1233 3,4 dihydroxy-2-butanone-4-phosphate synthasechromosome I CDS1284113 654 + 0.46789
ribC PSHAa1734 riboflavin synthasechromosome I CDS1814688 627 - 0.38756
ribD PSHAa2374 Riboflavin biosynthesis proteinchromosome I CDS2520489 1149 - 0.412533
ribE PSHAa2373 Riboflavin synthase subunit Echromosome I CDS2519831 654 - 0.394495
ribF PSHAa0917 bifunctional protein [Includes: Riboflavin kinase (Flavokinase); FMN adenylyltransferase (FAD pyrophosphorylase) (FAD synthetase)]chromosome I CDS945307 927 + 0.392665
ribH PSHAa2371 6,7-dimethyl-8-ribityllumazine synthasechromosome I CDS2518132 465 - 0.417204
rimK PSHAa2577 ribosomal protein S6 modification proteinchromosome I CDS2723323 906 - 0.432671
rraA PSHAa2734 regulator of RNase E/rne (Belongs to the rraA family)chromosome I CDS2900364 498 + 0.437751
rraB PSHAb0201 putative regulator of ribonuclease E activity (Rra family)chromosome II CDS238310 483 - 0.424431
serA PSHAa0666 D-3-phosphoglycerate dehydrogenasechromosome I CDS693777 1230 - 0.427642
serC PSHAa1422 3-phosphoserine/phosphohydroxythreonineaminotran sferasechromosome I CDS1497076 1083 + 0.411819
thiC PSHAa0480 thiamine biosynthesis protein thiCchromosome I CDS497369 1953 + 0.436252
thiDE PSHAa0484 putative phosphomethylpyrimidine kinase/thiamin-phosphate pyrophosphorylasechromosome I CDS501391 1527 + 0.425016
thiF PSHAa0485 putative adenylyltransferase; thiamine biosynthesis proteinchromosome I CDS502940 747 + 0.421687
thiG PSHAa0483 thiazole biosynthesis proteinchromosome I CDS500588 792 + 0.443182
thiL PSHAa2369 thiamin-monophosphate kinasechromosome I CDS2516637 981 - 0.415902
thiS PSHAa0482 putative ThiS proteinchromosome I CDS500388 195 + 0.4
trpE PSHAa1293 anthranilate synthase component Ichromosome I CDS1350444 1569 - 0.434672
trpG PSHAa1292 Anthranilate synthase component II (Glutamine amido-transferase)chromosome I CDS1349840 729 - 0.429355
ubiA PSHAa2310 4-hydroxybenzoate octaprenyltransferasechromosome I CDS2451968 879 - 0.379977
ubiD PSHAa0105 3-octaprenyl-4-hydroxybenzoate carboxylyase; ubiquinone biosynthesis, third stepchromosome I CDS108538 1467 - 0.436264
ubiE PSHAa2926 bifunctional protein [Includes: 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase; S-adenosylmethionine (2-DMK methyltransferase)]chromosome I CDS3098736 756 + 0.411376
ubiF PSHAa1047 2-octoprenyl-3-methyl-6-methoxy-1, 4-benzoquinone hydroxylasechromosome I CDS1085739 1170 + 0.422222
ubiG PSHAa1420 bifunctional: 3-demethylubiquinone-9 3-methyltransferase; 2-octaprenyl-6-hydroxy phenol methylasechromosome I CDS1493164 711 - 0.428973
ubiH PSHAa0563 2-octaprenyl-6-methoxyphenol hydroxylasechromosome I CDS583881 1191 + 0.429051
visC PSHAa0564 putative monooxygenase, FAD/NAD(P)-binding domainchromosome I CDS585068 1167 + 0.448158
yggW PSHAa2609 putative oxygen-independent coproporphyrinogen III oxidasechromosome I CDS2752395 1137 + 0.431838