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2024-05-13 22:42:18

Gene list

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COG category: Coenzyme transport and metabolism
Organism: Lactobacillus sakei subsp. sakei 23K, 23K

Number of genes found: 48

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Lactobacillus sakei subsp. sakei 23K, 23K
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA LSA0400 Iron(III)-compound ABC transporter, ATP-binding subunitSubName: Full=Iron(III)-compound ABC transporter, ATP-binding subunit; chromosome CDS409459 804 + 0.427861
NA LSA1664 Putative dihydrofolate reductaseSubName: Full=Putative dihydrofolate reductase; chromosome CDS1646805 540 + 0.418519
NA LSA1352 Putative phosphomethylpyrimidine kinaseSubName: Full=Putative phosphomethylpyrimidine kinase; chromosome CDS1321625 795 + 0.466667
NA LSA1390 Putative metal-dependent phosphohydrolaseSubName: Full=Putative metal-dependent phosphohydrolase; chromosome CDS1357569 603 - 0.434494
NA LSA0695 Putative thiamin pyrophosphokinaseSubName: Full=Putative thiamin pyrophosphokinase; EC=2.7.6.2; chromosome CDS693484 651 + 0.46851
NA LSA1510_c Hypothetical protein with a signal peptidase II-like domainSubName: Full=Uncharacterized protein; chromosome CDS1481358 1275 - 0.270588
NA LSA1210 Putative cytosine:cation symporter (C-terminal fragment), authentic frameshiftSubName: Full=Putative cytosine:cation symporter (C-terminal), authentic frameshift; chromosome CDS1193498 591 - 0.416244
NA LSA0980 Putative hydroxymethylpyrimidine / phosphomethylpyrimidine kinase, PfkB familySubName: Full=Putative hydroxymethylpyrimidine / phosphomethylpyrimidine kinase, PfkB family; EC=2.7.4.7; chromosome CDS972913 798 + 0.472431
NA LSA1189 Hypothetical integral membrane proteinSubName: Full=Hypothetical integral membrane protein; chromosome CDS1172944 696 - 0.390805
NA LSA1633 Hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1618074 843 + 0.465006
NA LSA1240 Putative coproporphyrinogen oxidase, HemNSubName: Full=Putative coproporphyrinogen oxidase, HemN; EC=1.3.3.3; chromosome CDS1219358 1140 - 0.421053
NA LSA1241 Bifunctional enzyme, riboflavin kinase and FMN adenylyltransferaseSubName: Full=Bifunctional enzyme, riboflavin kinase and FMN adenylyltransferase; EC=2.7.1.26; EC=2.7.7.2; chromosome CDS1220497 954 - 0.43501
als LSA0982 Acetolactate synthase (Alpha-acetolactate synthase)SubName: Full=Acetolactate synthase (Alpha-acetolactate synthase); EC=2.2.1.6; chromosome CDS974638 1683 - 0.440879
birA1 LSA0824 Biotin-[acetyl-CoA carboxylase] ligaseSubName: Full=Biotin-[acetyl-CoA carboxylase] ligase; EC=6.3.4.15; chromosome CDS814669 756 + 0.460317
birA2 LSA1233 Biotin-[acetyl-CoA-carboxylase] ligaseSubName: Full=Biotin-[acetyl-CoA-carboxylase] ligase; EC=6.3.4.15; chromosome CDS1212343 768 - 0.378906
citG LSA1220 Triphosphoribosyl-dephospho-coenzymeA synthaseRecName: Full=Probable 2-(5-triphosphoribosyl)-3-dephosphocoenzyme-A synthase; Short=2-(5-triphosphoribosyl)-3-dephospho-CoA synthase; EC=2.4.2.52; chromosome CDS1201510 876 - 0.383562
citX LSA1223 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferaseSubName: Full=Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase; EC=2.7.7.61; chromosome CDS1204549 552 - 0.403986
coaE LSA1404 Dephosphocoenzyme A kinaseRecName: Full=Dephospho-CoA kinase; EC=2.7.1.24; AltName: Full=Dephosphocoenzyme A kinase; chromosome CDS1370499 609 - 0.456486
dfp LSA0687 Phosphopantothenoylcysteinesynthetase/decarboxyl aseSubName: Full=Phosphopantothenoylcysteinesynthetase/decarboxyla se; EC=4.1.1.36; EC=6.3.2.5; chromosome CDS683219 1218 + 0.466338
dfrA LSA1000 Dihydrofolate reductaseRecName: Full=Dihydrofolate reductase; EC=1.5.1.3; chromosome CDS991623 501 - 0.383234
folB LSA1102 Dihydroneopterin aldolaseSubName: Full=Dihydroneopterin aldolase; EC=4.1.2.25; chromosome CDS1096323 351 - 0.415954
folC1 LSA0850 Putative polylpolyglutamate synthaseSubName: Full=Putative polylpolyglutamate synthase; EC=6.3.2.17; chromosome CDS838603 1305 + 0.442912
folC2 LSA1099 Folylpolyglutamate synthaseSubName: Full=Folylpolyglutamate synthase; EC=6.3.2.17; chromosome CDS1093936 1308 - 0.471713
folD LSA0676 Bifunctional enzyme: Methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolaseRecName: Full=Bifunctional protein FolD; Includes: RecName: Full=Methylenetetrahydrofolate dehydrogenase; EC=1.5.1.5; Includes: RecName: Full=Methenyltetrahydrofolate cyclohydrolase; EC=3.5.4.9; chromosome CDS675034 852 + 0.447183
folE LSA1100 GTP cyclohydrolase IRecName: Full=GTP cyclohydrolase 1; EC=3.5.4.16; AltName: Full=GTP cyclohydrolase I; Short=GTP-CH-I; chromosome CDS1095255 570 - 0.429825
folK LSA1101 2-amino-4-hydroxy-6-hydroxymethyldihydropteridin epyrophosphokinaseSubName: Full=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; EC=2.7.6.3; chromosome CDS1095796 531 - 0.429379
folP LSA1098 Dihydropteroate synthaseSubName: Full=Dihydropteroate synthase; EC=2.5.1.15; chromosome CDS1092840 1086 - 0.458564
fthC LSA1332 5-formyltetrahydrofolate cyclo-ligaseSubName: Full=5-formyltetrahydrofolate cyclo-ligase; EC=6.3.3.2; chromosome CDS1300631 543 - 0.460405
ispA LSA0679 Farnesyl-diphosphate synthaseSubName: Full=Farnesyl-diphosphate synthase; EC=2.5.1.10; chromosome CDS677459 873 + 0.44559
kbl LSA0509 2-amino-3-ketobutyrate coenzyme A ligase (Glycine acetyltransferase)SubName: Full=2-amino-3-ketobutyrate coenzyme A ligase (Glycine acetyltransferase); EC=2.3.1.29; chromosome CDS527761 1188 + 0.436027
kdtB LSA1073 Phosphopantetheine adenylyltransferase (Pantetheine-phosphate adenylyltransferase)RecName: Full=Phosphopantetheine adenylyltransferase; EC=2.7.7.3; AltName: Full=Dephospho-CoA pyrophosphorylase; AltName: Full=Pantetheine-phosphate adenylyltransferase; Short=PPAT; chromosome CDS1068486 498 - 0.423695
lplA LSA0934 Lipoate-protein ligaseSubName: Full=Lipoate-protein ligase; EC=6.-.-.-; chromosome CDS921979 1014 - 0.401381
metK LSA0468 Methionine adenosyltransferase (S-adenosylmethionine synthetase)RecName: Full=S-adenosylmethionine synthase; Short=AdoMet synthase; EC=2.5.1.6; AltName: Full=MAT; AltName: Full=Methionine adenosyltransferase; chromosome CDS485247 1200 + 0.4225
nadC LSA1570 Nicotinate phosphoribosyltransferaseRecName: Full=Nicotinate phosphoribosyltransferase; EC=6.3.4.21; chromosome CDS1544046 1464 - 0.422814
nadD LSA1391 Nicotinate-nucleotide adenylyltransferase (Deamido-NAD(+) pyrophosphorylase)RecName: Full=Probable nicotinate-nucleotide adenylyltransferase; EC=2.7.7.18; AltName: Full=Deamido-NAD(+) diphosphorylase; AltName: Full=Deamido-NAD(+) pyrophosphorylase; AltName: Full=Nicotinate mononucleotide adenylyltransferase; chromosome CDS1358164 648 - 0.439815
nadE LSA1569 NH(3)-dependent NAD(+) synthetaseRecName: Full=NH(3)-dependent NAD(+) synthetase; EC=6.3.1.5; chromosome CDS1543187 828 - 0.444444
panE LSA0041 2-dehydropantoate 2-reductaseRecName: Full=2-dehydropantoate 2-reductase; EC=1.1.1.169; chromosome CDS38535 939 + 0.461129
panK LSA0138 Pantothenate kinaseRecName: Full=Pantothenate kinase; EC=2.7.1.33; AltName: Full=Pantothenic acid kinase; chromosome CDS131721 930 + 0.410753
pox1 LSA1188 Pyruvate oxidaseSubName: Full=Pyruvate oxidase; EC=1.2.3.3; chromosome CDS1170993 1836 + 0.413943
pox2 LSA1830 Pyruvate oxidaseSubName: Full=Pyruvate oxidase; EC=1.2.3.3; chromosome CDS1819510 1734 - 0.443483
pyrDA LSA0956 Dihydroorotate oxidase, electron transfer subunitRecName: Full=Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit; AltName: Full=Dihydroorotate oxidase B, electron transfer subunit; chromosome CDS945392 792 + 0.463384
serA LSA0922 D-3-phosphoglycerate dehydrogenaseSubName: Full=D-3-phosphoglycerate dehydrogenase; EC=1.1.1.95; chromosome CDS913496 954 + 0.42348
thiD LSA0058 Phosphomethylpyrimidine kinase (HMP-phosphate kinase)SubName: Full=Phosphomethylpyrimidine kinase (HMP-phosphate kinase); EC=2.7.4.7; chromosome CDS52955 813 - 0.487085
thiE LSA0057 Thiamine-phosphate pyrophosphorylase (Thiamine-phosphate synthase)RecName: Full=Thiamine-phosphate synthase; Short=TP synthase; Short=TPS; EC=2.5.1.3; AltName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP pyrophosphorylase; Short=TMP-PPase; chromosome CDS52288 675 - 0.44
thiI LSA0847 Thiamine biosynthesis ATP pyrophosphorylaseRecName: Full=Probable tRNA sulfurtransferase; EC=2.8.1.4; AltName: Full=Sulfur carrier protein ThiS sulfurtransferase; AltName: Full=Thiamine biosynthesis protein ThiI; AltName: Full=tRNA 4-thiouridine synthase; chromosome CDS833543 1218 + 0.400657
thiM LSA0059 Hydroxyethylthiazole kinase (4-methyl-5-beta-hydroxyethylthiazole kinase)RecName: Full=Hydroxyethylthiazole kinase; EC=2.7.1.50; AltName: Full=4-methyl-5-beta-hydroxyethylthiazole kinase; Short=TH kinase; Short=Thz kinase; chromosome CDS53760 810 - 0.464198
ubiD LSA0580 3-octaprenyl-4-hydroxybenzoate carboxy-lyaseSubName: Full=3-octaprenyl-4-hydroxybenzoate carboxy-lyase; EC=4.1.1.-; chromosome CDS589064 1476 + 0.436992
ubiX LSA0581 Putative 3-octaprenyl 4-hydroxybenzoate carboxylyaseSubName: Full=Putative 3-octaprenyl 4-hydroxybenzoate carboxylyase; EC=4.1.1.-; chromosome CDS590561 591 + 0.443316