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2024-04-29 18:53:01

Gene list

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COG category: Coenzyme transport and metabolism
Organism: Rhodopseudomonas palustris BisB18, BisB18

Number of genes found: 174

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Rhodopseudomonas palustris BisB18, BisB18
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA RPC_1693 thiamine pyrophosphate enzyme-like TPP-bindingchromosome CDS1831357 1626 - 0.682657
NA RPC_1290 Polyprenyl synthetasechromosome CDS1404430 867 + 0.701269
NA RPC_4011 phosphoadenosine phosphosulfate reductasechromosome CDS4459429 732 - 0.672131
NA RPC_1896 Precorrin-6A synthase, deacetylatingchromosome CDS2067797 759 + 0.641634
NA RPC_0566 conserved hypothetical proteinchromosome CDS617749 1050 - 0.619048
NA RPC_1149 deoxyxylulose-5-phosphate synthasechromosome CDS1249565 1926 - 0.667705
NA RPC_3747 cobalbumin biosynthesis enzymechromosome CDS4172590 588 - 0.693878
NA RPC_3947 extracellular solute-binding protein, family 1chromosome CDS4397087 1017 + 0.663717
NA RPC_4711 4-hydroxybenzoate polyprenyl transferasechromosome CDS5272918 933 - 0.670954
NA RPC_2165 thiamine biosynthesis protein ThiSchromosome CDS2357884 198 - 0.666667
NA RPC_3078 Dimethylmenaquinone methyltransferasechromosome CDS3410372 648 - 0.654321
NA RPC_4592 Triphosphoribosyl-dephospho-CoA synthasechromosome CDS5124623 948 - 0.655063
NA RPC_1886 precorrin-3B C17-methyltransferasechromosome CDS2056416 762 - 0.683727
NA RPC_3491 thiamine pyrophosphate enzyme-like TPP-bindingchromosome CDS3877661 1590 - 0.701887
NA RPC_3114 GTP cyclohydrolase Ichromosome CDS3456247 705 - 0.668085
NA RPC_0059 Methenyltetrahydrofolate cyclohydrolasechromosome CDS66341 888 + 0.68018
NA RPC_0016 2-dehydropantoate 2-reductasechromosome CDS19586 924 - 0.680736
NA RPC_1887 precorrin-2 C20-methyltransferasechromosome CDS2057174 732 - 0.662568
NA RPC_2625 Dimethylmenaquinone methyltransferasechromosome CDS2858814 705 + 0.686525
NA RPC_4634 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-bindingchromosome CDS5178284 1011 - 0.616222
NA RPC_1191 thiamine pyrophosphate enzyme-like TPP binding regionchromosome CDS1303648 1638 - 0.699023
NA RPC_2792 Silent information regulator protein Sir2chromosome CDS3031285 762 - 0.658793
NA RPC_4257 cobyric acid synthase CobQchromosome CDS4740205 1575 - 0.684444
NA RPC_4812 5-formyltetrahydrofolate cyclo-ligasechromosome CDS5372648 585 - 0.678632
NA RPC_1986 transport system permease proteinchromosome CDS2162253 1023 + 0.685239
NA RPC_0573 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-bindingchromosome CDS624956 981 + 0.672783
NA RPC_2090 thiamine pyrophosphate enzyme-like TPP-bindingchromosome CDS2287987 1557 + 0.684008
NA RPC_3689 molybdopterin-guanine dinucleotide biosynthesis protein Achromosome CDS4112958 639 + 0.691706
NA RPC_0063 Sulfate adenylyltransferase, small subunitchromosome CDS71641 987 + 0.666667
NA RPC_1968 transport system permease proteinchromosome CDS2142008 1098 - 0.677596
NA RPC_4318 modD proteinchromosome CDS4817300 864 + 0.712963
NA RPC_4782 3-octaprenyl-4-hydroxybenzoate carboxy-lyasechromosome CDS5342686 597 + 0.690117
NA RPC_1959 cobalamin (vitamin B12) biosynthesis CbiM proteinchromosome CDS2131409 627 + 0.669856
NA RPC_1894 cobalamin 5'-phosphate synthasechromosome CDS2066424 789 + 0.718631
NA RPC_2455 MoeA-like, domain I and IIchromosome CDS2660220 1212 - 0.711221
NA RPC_1273 putative periplasmic solute-binding proteinchromosome CDS1388495 1002 - 0.61477
NA RPC_1325 5-aminolevulinic acid synthasechromosome CDS1441151 1212 + 0.656766
NA RPC_0732 glutamate--cysteine ligasechromosome CDS801691 1371 - 0.651349
NA RPC_1850 2-dehydropantoate 2-reductasechromosome CDS2013016 1062 - 0.663842
NA RPC_0047 Uroporphyrinogen III synthase HEM4chromosome CDS54230 747 + 0.681392
NA RPC_0296 Dephospho-CoA kinasechromosome CDS318758 600 + 0.681667
NA RPC_4554 molybdopterin binding domainchromosome CDS5084765 522 + 0.699234
NA RPC_4016 phosphoadenosine phosphosulfate reductasechromosome CDS4464316 807 + 0.636927
NA RPC_1302 bacteriochlorophyll/chlorophyll synthetasechromosome CDS1415952 912 + 0.673246
NA RPC_4154 Methionine adenosyltransferasechromosome CDS4615572 1197 - 0.650794
NA RPC_4842 Ferrochelatasechromosome CDS5403976 1113 + 0.63522
NA RPC_4781 Carboxylyase-related proteinchromosome CDS5341163 1527 + 0.658153
NA RPC_0086 ABC transporter relatedchromosome CDS97830 783 + 0.724138
NA RPC_2163 thiamine-phosphate pyrophosphorylasechromosome CDS2356505 609 - 0.665025
NA RPC_4442 molybdenum-pterin binding domainchromosome CDS4950110 207 - 0.589372
NA RPC_0312 pantothenate kinasechromosome CDS331242 954 + 0.65304
NA RPC_0319 glutathione synthetasechromosome CDS340413 942 - 0.64862
NA RPC_4153 adenosylhomocysteinasechromosome CDS4613889 1446 - 0.628631
NA RPC_1765 dihydropteroate synthasechromosome CDS1917031 858 - 0.684149
NA RPC_0085 transport system permease proteinchromosome CDS96784 1050 + 0.695238
NA RPC_3610 transport system permease proteinchromosome CDS4014446 1083 - 0.676824
NA RPC_2663 Riboflavin synthasechromosome CDS2891871 513 + 0.678363
NA RPC_3332 pantoate--beta-alanine ligasechromosome CDS3691533 936 + 0.684829
NA RPC_4254 transport system permease proteinchromosome CDS4737578 990 + 0.69495
NA RPC_3744 cobalamin biosynthesis protein CobDchromosome CDS4169355 972 + 0.664609
NA RPC_0162 Nicotinate-nucleotide adenylyltransferasechromosome CDS178158 630 + 0.706349
NA RPC_2418 Biotin--acetyl-CoA-carboxylase ligasechromosome CDS2620669 804 + 0.685323
NA RPC_4338 quinolinate synthetase complex, A subunitchromosome CDS4835613 1113 + 0.646002
NA RPC_2572 lipoic acid synthetasechromosome CDS2793212 960 + 0.651042
NA RPC_2524 transcriptional coactivator/pterin dehydratasechromosome CDS2735241 306 - 0.666667
NA RPC_3263 Dihydrofolate reductasechromosome CDS3612465 516 - 0.664729
NA RPC_0894 aminotransferase class-IIIchromosome CDS990476 1344 + 0.667411
NA RPC_2581 aminotransferase, class IVchromosome CDS2804506 858 + 0.651515
NA RPC_2097 adenosylmethionine-8-amino-7-oxononanoateaminotr ansferasechromosome CDS2297267 1269 - 0.669819
NA RPC_2162 thiamine biosynthesis protein ThiCchromosome CDS2354093 2130 - 0.647418
NA RPC_3820 6-pyruvoyl tetrahydropterin synthase and hypothetical proteinchromosome CDS4251678 369 - 0.626016
NA RPC_3745 cobyric acid synthase CobQchromosome CDS4170299 1482 - 0.67004
NA RPC_3456 Methyltransferase type 11chromosome CDS3833714 2097 - 0.628517
NA RPC_3248 ketol-acid reductoisomerasechromosome CDS3597587 1020 - 0.614706
NA RPC_0364 UBA/THIF-type NAD/FAD binding foldchromosome CDS388772 801 - 0.685393
NA RPC_1250 Magnesium chelatase ATPase subunit Ichromosome CDS1365666 1023 + 0.687195
NA RPC_4201 Coenzyme F390 synthetase-likechromosome CDS4670611 1374 + 0.636827
NA RPC_2082 NAD+ synthetasechromosome CDS2278744 1764 + 0.665533
NA RPC_4354 Farnesyltranstransferasechromosome CDS4854361 1011 + 0.666667
NA RPC_4426 4-hydroxythreonine-4-phosphate dehydrogenasechromosome CDS4933614 1008 - 0.673611
NA RPC_2276 3-methyl-2-oxobutanoate hydroxymethyltransferasechromosome CDS2475096 825 + 0.648485
NA RPC_4339 L-aspartate oxidasechromosome CDS4836845 1605 + 0.716511
NA RPC_1888 Precorrin-8X methylmutasechromosome CDS2057902 630 - 0.695238
NA RPC_1879 molybdenum cofactor synthesis-likechromosome CDS2050122 1065 + 0.65446
NA RPC_3348 lipoate-protein ligase Bchromosome CDS3703517 744 + 0.689516
NA RPC_1884 Precorrin-6y C5,15-methyltransferase, subunit CbiEchromosome CDS2054448 1113 - 0.706199
NA RPC_2465 molybdenum cofactor biosynthesis protein Cchromosome CDS2672979 573 - 0.65096
NA RPC_3149 monooxygenase, FAD-bindingchromosome CDS3492705 1197 + 0.700919
NA RPC_4824 5-aminolevulinic acid synthasechromosome CDS5385099 1230 - 0.64065
NA RPC_1764 dihydroneopterin aldolasechromosome CDS1916654 381 - 0.674541
NA RPC_2099 8-amino-7-oxononanoate synthasechromosome CDS2299158 1155 - 0.673593
NA RPC_1987 ABC transporter relatedchromosome CDS2163272 786 + 0.689567
NA RPC_0171 Porphobilinogen synthasechromosome CDS186986 975 - 0.668718
NA RPC_3609 ABC transporter relatedchromosome CDS4013658 792 - 0.690657
NA RPC_1249 porphobilinogen deaminasechromosome CDS1364627 981 + 0.659531
NA RPC_2637 pyridoxal phosphate biosynthetic protein PdxJchromosome CDS2868886 768 + 0.696615
NA RPC_2098 dethiobiotin synthasechromosome CDS2298532 630 - 0.665079
NA RPC_0132 aminotransferase, class IVchromosome CDS145860 906 + 0.577263
NA RPC_0497 Polyprenyl synthetasechromosome CDS537350 927 - 0.696872
NA RPC_3746 cob(I)alamin adenosyltransferasechromosome CDS4171967 627 - 0.645933
NA RPC_1136 pyridoxamine 5'-phosphate oxidasechromosome CDS1236691 642 - 0.665109
NA RPC_1033 naphthoate synthasechromosome CDS1133002 783 + 0.621967
NA RPC_0389 FolC bifunctional proteinchromosome CDS422358 1344 - 0.706101
NA RPC_2617 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 familychromosome CDS2850980 1203 - 0.684954
NA RPC_2661 riboflavin biosynthesis protein RibDchromosome CDS2890033 1152 + 0.721354
NA RPC_1263 Coproporphyrinogen oxidasechromosome CDS1380190 915 + 0.666667
NA RPC_0323 Putative oxygen-independent coproporphyrinogen III oxidasechromosome CDS344279 1161 - 0.672696
NA RPC_0683 Phenylacetate-CoA ligasechromosome CDS744968 1335 + 0.653184
NA RPC_1971 Radical SAMchromosome CDS2144676 1416 + 0.684322
NA RPC_0888 monooxygenase, FAD-bindingchromosome CDS982277 1608 + 0.68408
NA RPC_4564 molybdenum cofactor synthesis-likechromosome CDS5094799 1023 - 0.669599
NA RPC_1315 Magnesium-chelatase, subunit Hchromosome CDS1429934 3744 + 0.654647
NA RPC_0267 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 familychromosome CDS284271 1221 - 0.694513
NA RPC_2665 thiamine-monophosphate kinasechromosome CDS2893117 1017 + 0.712881
NA RPC_0904 molybdopterin biosynthesis MoaEchromosome CDS1001042 459 + 0.666667
NA RPC_0378 ubiquinone/menaquinone biosynthesis methyltransferaseschromosome CDS404811 813 + 0.643296
NA RPC_4340 nicotinate-nucleotide pyrophosphorylasechromosome CDS4838466 879 + 0.699659
NA RPC_1889 Cobaltochelatase, CobN subunitchromosome CDS2058528 3327 - 0.704539
NA RPC_1967 ABC transporter relatedchromosome CDS2141202 810 - 0.7
NA RPC_1399 riboflavin biosynthesis protein RibFchromosome CDS1526301 972 - 0.675926
NA RPC_0380 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligasechromosome CDS407272 1428 + 0.670868
NA RPC_2713 Dimethylmenaquinone methyltransferasechromosome CDS2943616 678 + 0.622419
NA RPC_4823 periplasmic sensor hybrid histidine kinasechromosome CDS5381441 3510 - 0.65755
NA RPC_0433 Twin-arginine translocation pathway signalchromosome CDS467127 1002 + 0.727545
NA RPC_3748 Nicotinate-nucleotide-dimethylbenzimidazolephosphoribosyltransferasechromosome CDS4173573 1056 + 0.695076
NA RPC_0138 hypothetical proteinchromosome CDS151247 1248 - 0.53766
NA RPC_2309 4-hydroxythreonine-4-phosphate dehydrogenasechromosome CDS2508984 1020 - 0.715686
NA RPC_4789 protoheme IX farnesyltransferasechromosome CDS5350884 942 + 0.661359
NA RPC_2588 Coenzyme A biosynthesis proteinchromosome CDS2816042 498 + 0.664659
NA RPC_1763 2-amino-4-hydroxy-6-hydroxymethyldihydropteridin epyrophosphokinasechromosome CDS1916173 489 - 0.693252
NA RPC_4165 Uroporphyrinogen III synthase HEM4chromosome CDS4628677 843 + 0.689205
NA RPC_1880 uroporphyrin-III C-methyltransferasechromosome CDS2051204 768 - 0.688802
NA RPC_1258 uroporphyrinogen decarboxylasechromosome CDS1374245 978 - 0.669734
NA RPC_1056 Biotin--acetyl-CoA-carboxylase ligasechromosome CDS1161690 864 + 0.65162
NA RPC_0903 molybdopterin converting factor, subunit 1chromosome CDS1000784 252 + 0.674603
NA RPC_1443 Phosphomethylpyrimidine kinasechromosome CDS1570094 810 + 0.693827
NA RPC_1054 Triphosphoribosyl-dephospho-CoA synthasechromosome CDS1159401 903 + 0.6866
NA RPC_3236 biotin synthasechromosome CDS3582921 1071 + 0.641457
NA RPC_1177 Methionine adenosyltransferasechromosome CDS1280129 1152 + 0.661458
NA RPC_4107 phosphoserine aminotransferasechromosome CDS4569041 1173 - 0.665814
NA RPC_0843 Carboxylyase-related proteinchromosome CDS929336 1419 + 0.659619
NA RPC_1885 precorrin-6x reductasechromosome CDS2055670 780 + 0.694872
NA RPC_2726 Dimethylmenaquinone methyltransferasechromosome CDS2960137 702 - 0.635328
NA RPC_4255 ABC transporter relatedchromosome CDS4738564 783 + 0.720307
NA RPC_3470 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-bindingchromosome CDS3854333 963 - 0.699896
NA RPC_1251 von Willebrand factor, type Achromosome CDS1366685 1800 + 0.717222
NA RPC_1408 6,7-dimethyl-8-ribityllumazine synthasechromosome CDS1535311 531 + 0.691149
NA RPC_0842 3-octaprenyl-4-hydroxybenzoate carboxy-lyasechromosome CDS928679 618 + 0.68123
NA RPC_0561 Phenylacetate--CoA ligasechromosome CDS612292 1344 - 0.661458
NA RPC_1881 cobyrinic acid a,c-diamide synthasechromosome CDS2051968 1326 - 0.696833
NA RPC_3814 oxygen-independent coproporphyrinogen III oxidasechromosome CDS4245090 1350 + 0.654074
NA RPC_3255 acetolactate synthase, large subunit, biosynthetic typechromosome CDS3602701 1782 - 0.647587
NA RPC_4211 HAD-superfamily hydrolase, subfamily IA, variant 1chromosome CDS4683327 1449 - 0.545894
NA RPC_1637 4-diphosphocytidyl-2C-methyl-D-erythritolsynthas echromosome CDS1770138 1605 + 0.68972
NA RPC_3708 conserved hypothetical proteinchromosome CDS4129629 498 - 0.644578
NA RPC_4388 anthranilate synthasechromosome CDS4892572 2163 - 0.668516
NA RPC_4219 Methyltransferase type 12chromosome CDS4693720 1239 + 0.630347
NA RPC_3948 binding-protein-dependent transport systems inner membrane componentchromosome CDS4398214 1680 + 0.711905
NA RPC_2651 Porphobilinogen synthasechromosome CDS2882320 1059 - 0.6695
NA RPC_2073 molybdenum cofactor synthesis-likechromosome CDS2270447 1035 - 0.66087
NA RPC_2022 UBA/THIF-type NAD/FAD binding foldchromosome CDS2205177 1161 + 0.614126
NA RPC_0354 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-bindingchromosome CDS373978 1002 + 0.654691
NA RPC_4298 3,4-dihydroxy-2-butanone 4-phosphate synthasechromosome CDS4798154 1077 - 0.650882
NA RPC_4260 thiamine pyrophosphate enzyme-like TPP-bindingchromosome CDS4743346 1539 - 0.674464
NA RPC_2662 riboflavin synthase, alpha subunitchromosome CDS2891186 609 + 0.669951
NA RPC_4015 uroporphyrin-III C-methyltransferasechromosome CDS4462631 1443 - 0.66043
NA RPC_0698 Phenylacetate--CoA ligasechromosome CDS760472 1341 + 0.676361
NA RPC_1882 precorrin-4 C11-methyltransferasechromosome CDS2053286 780 - 0.689744
NA RPC_1388 branched-chain amino acid aminotransferasechromosome CDS1512842 1113 + 0.656783
NA RPC_4774 thiamine monophosphate synthasechromosome CDS5334913 693 + 0.718615
NA RPC_1626 Putative oxygen-independent coproporphyrinogen III oxidasechromosome CDS1760997 1164 - 0.559278
NA RPC_0515 ubiquinone biosynthesis O-methyltransferasechromosome CDS557293 765 + 0.648366
NA RPC_1451 mandelate racemase/muconate lactonizing enzymechromosome CDS1577784 996 - 0.690763
NA RPC_0660 ApbE-like lipoproteinchromosome CDS716421 2403 + 0.709946