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2024-05-02 21:35:53

Gene list

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COG category: Coenzyme transport and metabolism
Organism: Rhodoferax ferrireducens DSM 15236, DSM 15236

Number of genes found: 145

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Rhodoferax ferrireducens DSM 15236, DSM 15236
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA Rfer_4040 molybdenum cofactor biosynthesis protein Cchromosome CDS4506186 492 - 0.621951
NA Rfer_1752 Pyridoxal phosphate biosynthetic protein PdxJchromosome CDS1886855 759 + 0.637681
NA Rfer_3934 lipoic acid synthetasechromosome CDS4398046 1017 - 0.624385
NA Rfer_2889 molybdopterin binding domainchromosome CDS3191677 606 + 0.635314
NA Rfer_3034 pantoate--beta-alanine ligasechromosome CDS3348670 849 + 0.618375
NA Rfer_0652 adenosylhomocysteinasechromosome CDS676175 1461 + 0.587269
NA Rfer_0518 thiamine pyrophosphate enzyme-like TPP binding proteinchromosome CDS541203 1623 + 0.632163
NA Rfer_4164 putative aspartate 1-decarboxylasechromosome CDS4635101 273 - 0.542125
NA Rfer_3218 UBA/THIF-type NAD/FAD binding proteinchromosome CDS3565494 846 + 0.561466
NA Rfer_3322 acetolactate synthase, large subunit, biosynthetic typechromosome CDS3686721 1824 + 0.580592
NA Rfer_2077 Coproporphyrinogen oxidasechromosome CDS2252964 933 + 0.602358
NA Rfer_2472 Hydroxyethylthiazole kinasechromosome CDS2717801 834 - 0.619904
NA Rfer_3680 4-hydroxybenzoate polyprenyl transferasechromosome CDS4100172 891 - 0.626263
NA Rfer_2985 Dihydrofolate reductasechromosome CDS3291945 495 - 0.60202
NA Rfer_0337 Dimethylmenaquinone methyltransferasechromosome CDS336627 684 - 0.638889
NA Rfer_0731 putative ubiquinone biosynthesis monooxygenase COQ7chromosome CDS770686 633 + 0.658768
NA Rfer_1433 riboflavin biosynthesis protein RibFchromosome CDS1545391 969 - 0.629515
NA Rfer_1545 Ferrochelatasechromosome CDS1661923 1110 - 0.638739
NA Rfer_2876 Polyprenyl synthetasechromosome CDS3178796 945 - 0.657143
NA Rfer_2610 cobalamin-5-phosphate synthase CobSchromosome CDS2874026 843 - 0.633452
NA Rfer_1466 MoeA-like, domain I and IIchromosome CDS1576313 1362 - 0.619677
NA Rfer_1546 aminotransferase, class IVchromosome CDS1663095 915 + 0.595628
NA Rfer_3605 glutamine amidotransferase of anthranilate synthase or para-aminobenzoate synthasechromosome CDS4015393 627 - 0.602871
NA Rfer_3536 putative phenylacetate-CoA ligasechromosome CDS3931570 1257 - 0.624503
NA Rfer_3935 lipoate-protein ligase Bchromosome CDS4399110 693 - 0.623377
NA Rfer_1631 Putative oxygen-independent coproporphyrinogen III oxidasechromosome CDS1761703 1185 + 0.616034
NA Rfer_3565 4-hydroxythreonine-4-phosphate dehydrogenasechromosome CDS3963695 996 - 0.598394
NA Rfer_1410 transcriptional coactivator/pterin dehydratasechromosome CDS1519019 336 - 0.550595
NA Rfer_2292 biotin synthasechromosome CDS2515353 1050 - 0.61619
NA Rfer_3246 ABC transporter periplasmic binding protein, thiB subfamilychromosome CDS3598087 1023 - 0.623656
NA Rfer_0765 glutathione synthetasechromosome CDS801508 948 + 0.646624
NA Rfer_1087 5-formyltetrahydrofolate cyclo-ligasechromosome CDS1161909 600 - 0.586667
NA Rfer_2471 thiamine-phosphate pyrophosphorylasechromosome CDS2717148 660 - 0.642424
NA Rfer_0821 uroporphyrinogen decarboxylasechromosome CDS855395 1110 + 0.618919
NA Rfer_2078 putative nicotinate-nucleotide adenylyltransferasechromosome CDS2253898 597 + 0.582915
NA Rfer_2666 riboflavin biosynthesis protein RibDchromosome CDS2934843 1134 + 0.626102
NA Rfer_1594 binding-protein-dependent transport systems inner membrane componentchromosome CDS1728723 1626 - 0.651291
NA Rfer_1848 Triphosphoribosyl-dephospho-CoA synthasechromosome CDS1985817 957 + 0.629049
NA Rfer_2470 Phosphomethylpyrimidine kinasechromosome CDS2716277 843 - 0.616845
NA Rfer_2667 riboflavin synthase, alpha subunitchromosome CDS2936148 696 + 0.576149
NA Rfer_3015 Chorismate lyasechromosome CDS3325415 594 - 0.686869
NA Rfer_2618 cob(I)alamin adenosyltransferasechromosome CDS2881730 570 - 0.610526
NA Rfer_3033 3-methyl-2-oxobutanoate hydroxymethyltransferasechromosome CDS3347774 885 + 0.668927
NA Rfer_3245 binding-protein-dependent transport systems inner membrane componentchromosome CDS3596423 1653 - 0.659407
NA Rfer_1467 molybdopterin-guanine dinucleotide biosynthesis protein Achromosome CDS1577671 636 - 0.622642
NA Rfer_2508 2-amino-4-hydroxy-6-hydroxymethyldihydropteridin epyrophosphokinasechromosome CDS2770504 486 - 0.644033
NA Rfer_1938 oxygen-independent coproporphyrinogen III oxidasechromosome CDS2080070 1398 + 0.56867
NA Rfer_1916 molybdopterin converting factor, subunit 1chromosome CDS2057433 252 + 0.615079
NA Rfer_1369 glutamate-1-semialdehyde-2,1-aminomutasechromosome CDS1477446 1311 - 0.584287
NA Rfer_1715 porphobilinogen deaminasechromosome CDS1851358 948 + 0.649789
NA Rfer_2622 cobalbumin biosynthesis enzymechromosome CDS2885088 633 - 0.605055
NA Rfer_1281 Shikimate/quinate 5-dehydrogenasechromosome CDS1374326 1260 - 0.648413
NA Rfer_0133 3-octaprenyl-4-hydroxybenzoate carboxy-lyasechromosome CDS137732 570 - 0.640351
NA Rfer_1637 Dimethylmenaquinone methyltransferasechromosome CDS1768323 720 - 0.6125
NA Rfer_2875 deoxyxylulose-5-phosphate synthasechromosome CDS3176825 1899 - 0.620853
NA Rfer_0951 mandelate racemase/muconate lactonizing enzymechromosome CDS999624 1149 + 0.570931
NA Rfer_2905 Dephospho-CoA kinasechromosome CDS3215220 639 + 0.602504
NA Rfer_2668 3,4-dihydroxy-2-butanone 4-phosphate synthasechromosome CDS2936885 1140 + 0.635965
NA Rfer_0132 Carboxylyase-related proteinchromosome CDS136207 1485 - 0.63165
NA Rfer_0506 branched-chain amino acid aminotransferasechromosome CDS525352 951 + 0.575184
NA Rfer_1917 molybdopterin biosynthesis MoaEchromosome CDS2058052 492 + 0.607724
NA Rfer_1037 aminotransferase, class IVchromosome CDS1096537 882 - 0.589569
NA Rfer_3779 periplasmic sensor signal transduction histidine kinasechromosome CDS4222687 2763 - 0.62034
NA Rfer_2459 Sulfate adenylyltransferasechromosome CDS2707047 972 + 0.62037
NA Rfer_2612 cobyric acid synthase CobQchromosome CDS2876356 1485 - 0.650505
NA Rfer_2620 transport system permease proteinchromosome CDS2883119 1077 - 0.684308
NA Rfer_3134 mandelate racemase/muconate lactonizing enzymechromosome CDS3473356 1284 + 0.615265
NA Rfer_2686 FolC bifunctional proteinchromosome CDS2957255 1326 - 0.628959
NA Rfer_2616 cobalamin biosynthesis protein CobDchromosome CDS2880031 963 - 0.649014
NA Rfer_1301 GTP cyclohydrolase Ichromosome CDS1395547 729 + 0.576132
NA Rfer_2758 extracellular solute-binding protein, family 1chromosome CDS3045909 1044 + 0.564176
NA Rfer_1243 3-demethylubiquinone-9 3-methyltransferasechromosome CDS1338214 990 + 0.509091
NA Rfer_1897 diguanylate cyclase/phosphodiesterasechromosome CDS2036027 3267 - 0.645546
NA Rfer_0373 aminotransferase class-IIIchromosome CDS380484 1350 - 0.603704
NA Rfer_2402 conserved hypothetical proteinchromosome CDS2644952 1098 + 0.595628
NA Rfer_0843 mandelate racemase/muconate lactonizing enzymechromosome CDS881074 1167 - 0.598115
NA Rfer_0461 aminotransferase, class IVchromosome CDS471491 906 + 0.629139
NA Rfer_3571 Glutamate--cysteine ligase, monofunctionalchromosome CDS3971325 1557 + 0.617855
NA Rfer_2239 Coenzyme F390 synthetase-likechromosome CDS2451645 1401 + 0.630264
NA Rfer_2624 CobB/CobQ-like glutamine amidotransferasechromosome CDS2886592 1392 - 0.654454
NA Rfer_2405 Triphosphoribosyl-dephospho-CoA synthasechromosome CDS2647695 909 - 0.620462
NA Rfer_3032 aspartate 1-decarboxylasechromosome CDS3347370 408 + 0.622549
NA Rfer_2613 6-pyruvoyl tetrahydropterin synthase and hypothetical proteinchromosome CDS2877866 444 - 0.563063
NA Rfer_2647 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligasechromosome CDS2911883 1236 - 0.609223
NA Rfer_2669 Riboflavin synthasechromosome CDS2938017 474 + 0.586498
NA Rfer_3805 Porphobilinogen synthasechromosome CDS4245200 1017 + 0.620452
NA Rfer_1318 nicotinate-nucleotide pyrophosphorylasechromosome CDS1413444 891 + 0.638608
NA Rfer_1708 thiamine biosynthesis protein ThiCchromosome CDS1837996 1875 + 0.6176
NA Rfer_1689 protoheme IX farnesyltransferasechromosome CDS1817943 897 + 0.576366
NA Rfer_2059 pyridoxamine 5'-phosphate oxidasechromosome CDS2229045 777 - 0.603604
NA Rfer_1576 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 familychromosome CDS1705612 1128 - 0.628546
NA Rfer_1955 Protein of unknown function 1935chromosome CDS2098899 522 + 0.628352
NA Rfer_1267 Farnesyltranstransferasechromosome CDS1361219 984 - 0.613821
NA Rfer_2848 thiamineSchromosome CDS3145546 255 - 0.6
NA Rfer_2458 Phosphoadenylyl-sulfate reductase (thioredoxin)chromosome CDS2706289 762 + 0.61811
NA Rfer_2962 4-hydroxythreonine-4-phosphate dehydrogenasechromosome CDS3269157 1050 + 0.654286
NA Rfer_0814 Dihydroneopterin aldolasechromosome CDS849801 393 + 0.590331
NA Rfer_3607 anthranilate synthase component Ichromosome CDS4018315 1512 - 0.625
NA Rfer_2619 ABC transporter relatedchromosome CDS2882358 765 - 0.654902
NA Rfer_0351 aminotransferase class-IIIchromosome CDS351343 1437 + 0.585943
NA Rfer_3782 SSS sodium solute transporter superfamilychromosome CDS4226266 1692 + 0.577423
NA Rfer_2467 Thiamine-phosphate diphosphorylasechromosome CDS2714598 939 + 0.621938
NA Rfer_2883 uroporphyrin-III C-methyltransferasechromosome CDS3186412 867 + 0.670127
NA Rfer_2192 Na+/solute symporterchromosome CDS2392928 2310 + 0.555844
NA Rfer_2172 UbiE/COQ5 methyltransferasechromosome CDS2370222 801 - 0.535581
NA Rfer_1699 NAD+ synthetasechromosome CDS1828546 1686 + 0.60261
NA Rfer_3324 ketol-acid reductoisomerasechromosome CDS3689147 1017 + 0.559489
NA Rfer_3196 ApbE-like lipoproteinchromosome CDS3536350 1035 - 0.626087
NA Rfer_3880 Methionine adenosyltransferasechromosome CDS4331325 1182 - 0.625211
NA Rfer_2406 Holo-citrate lyase synthasechromosome CDS2648575 552 - 0.65942
NA Rfer_0339 4-hydroxybenzoate 3-monooxygenasechromosome CDS338499 1206 - 0.641791
NA Rfer_1915 MoeA-like, domain I and IIchromosome CDS2056150 1287 + 0.630925
NA Rfer_1716 uroporphyrinogen III synthasechromosome CDS1852306 822 + 0.644769
NA Rfer_3314 Anthranilate synthase component I and chorismate binding proteinchromosome CDS3678275 1848 - 0.662879
NA Rfer_2144 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-bindingchromosome CDS2325773 984 + 0.605691
NA Rfer_3089 molybdopterin-guanine dinucleotide biosynthesis protein Bchromosome CDS3426193 510 - 0.617647
NA Rfer_0827 Nicotinate phosphoribosyltransferase relatedchromosome CDS863465 1383 - 0.638467
NA Rfer_3509 thiamine pyrophosphate enzyme-like TPP binding proteinchromosome CDS3900537 1734 - 0.599193
NA Rfer_1570 phosphoserine aminotransferasechromosome CDS1696847 1113 - 0.629829
NA Rfer_1468 Radical SAMchromosome CDS1578308 1167 - 0.619537
NA Rfer_1291 ubiquinone/menaquinone biosynthesis methyltransferaseschromosome CDS1386003 732 + 0.577869
NA Rfer_3311 monooxygenase, FAD-bindingchromosome CDS3675202 1206 - 0.664179
NA Rfer_2209 Methenyltetrahydrofolate cyclohydrolasechromosome CDS2415492 864 - 0.609954
NA Rfer_2012 dihydropteroate synthasechromosome CDS2169355 879 + 0.600683
NA Rfer_3299 oxidoreductase FAD/NAD(P)-bindingchromosome CDS3662948 1083 + 0.649123
NA Rfer_2550 conserved hypothetical proteinchromosome CDS2809623 660 - 0.583333
NA Rfer_2465 thiamine biosynthesis protein ThiSchromosome CDS2713533 198 + 0.616162
NA Rfer_0529 thiamine-monophosphate kinasechromosome CDS553812 1008 - 0.674603
NA Rfer_3953 Biotin--acetyl-CoA-carboxylase ligasechromosome CDS4419876 807 - 0.665428
NA Rfer_2095 UBA/THIF-type NAD/FAD binding proteinchromosome CDS2269128 744 + 0.577957
NA Rfer_1667 Coenzyme A biosynthesis proteinchromosome CDS1798536 501 - 0.560878
NA Rfer_1914 molybdopterin-guanine dinucleotide biosynthesis protein Bchromosome CDS2055620 534 + 0.610487
NA Rfer_2828 ubiquinone biosynthesis O-methyltransferasechromosome CDS3128122 759 + 0.583663
NA Rfer_2843 bifunctional deaminase-reductase-likechromosome CDS3140483 648 - 0.572531
NA Rfer_3031 L-aspartate oxidasechromosome CDS3345724 1611 + 0.62756
NA Rfer_1774 molybdenum-pterin binding domainchromosome CDS1910034 216 - 0.578704
NA Rfer_0882 thiamine pyrophosphate enzyme-like TPP-bindingchromosome CDS921249 1677 + 0.639833
NA Rfer_1307 UBA/THIF-type NAD/FAD binding proteinchromosome CDS1399900 753 - 0.62417
NA Rfer_1407 putative membrane proteinchromosome CDS1515951 987 + 0.604863
NA Rfer_2478 thiamine pyrophosphate enzyme-like TPP binding proteinchromosome CDS2728586 1758 - 0.680319
NA Rfer_1041 aminotransferase class-IIIchromosome CDS1101784 1341 - 0.582401
NA Rfer_0676 putative CapK proteinchromosome CDS704862 1380 + 0.560145
NA Rfer_2611 Nicotinate-nucleotide-dimethylbenzimidazolephosphoribosyltransferasechromosome CDS2875217 1089 - 0.646465
NA Rfer_0883 extracellular solute-binding protein, family 1chromosome CDS922994 1068 - 0.592697
NA Rfer_1319 quinolinate synthetase complex, A subunitchromosome CDS1414377 1137 + 0.651715