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2024-05-06 09:22:18

Gene list

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COG category: Coenzyme transport and metabolism
Organism: Frankia sp. CcI3, CcI3

Number of genes found: 157

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Frankia sp. CcI3, CcI3
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA Francci3_3763 biotin synthasechromosome CDS4512016 1077 + 0.700093
NA Francci3_0701 Biotin--acetyl-CoA-carboxylase ligasechromosome CDS802798 933 + 0.707395
NA Francci3_3070 thiamine-phosphate pyrophosphorylasechromosome CDS3638248 714 - 0.742297
NA Francci3_3369 aminotransferase class-IIIchromosome CDS3997550 1335 - 0.706367
NA Francci3_3071 thiamine biosynthesis protein ThiSchromosome CDS3638942 258 - 0.717054
NA Francci3_2667 Methenyltetrahydrofolate cyclohydrolasechromosome CDS3148796 867 - 0.704729
NA Francci3_1902 Ferrochelatasechromosome CDS2235077 1089 + 0.732782
NA Francci3_1520 Precorrin-8X methylmutasechromosome CDS1820766 660 + 0.716667
NA Francci3_2297 cobyrinic acid a,c-diamide synthasechromosome CDS2677146 1674 - 0.777778
NA Francci3_2585 ApbE-like lipoproteinchromosome CDS3049097 1053 + 0.758784
NA Francci3_0528 uroporphyrin-III C-methyltransferasechromosome CDS613123 1527 + 0.760314
NA Francci3_3905 magnesium chelatase, ChlI subunitchromosome CDS4672699 1524 + 0.732283
NA Francci3_4207 Salicylate 1-monooxygenasechromosome CDS5023181 1221 + 0.670762
NA Francci3_0515 Carboxylyase-related proteinchromosome CDS601191 1524 + 0.688976
NA Francci3_3778 aminotransferase class-IIIchromosome CDS4527275 1374 - 0.697234
NA Francci3_0383 thiamine biosynthesis protein ThiCchromosome CDS456092 1959 + 0.696274
NA Francci3_3612 Phosphomethylpyrimidine kinasechromosome CDS4312639 834 + 0.709832
NA Francci3_4406 dihydroneopterin aldolasechromosome CDS5267541 468 - 0.702991
NA Francci3_0079 pyridoxamine 5'-phosphate oxidasechromosome CDS97224 837 - 0.731183
NA Francci3_4498 oxidoreductase FAD/NAD(P)-bindingchromosome CDS5370092 915 - 0.726776
NA Francci3_1492 Methenyltetrahydrofolate cyclohydrolasechromosome CDS1786842 831 - 0.723225
NA Francci3_3082 aminotransferase, class IVchromosome CDS3651363 780 - 0.637179
NA Francci3_4405 2-amino-4-hydroxy-6-hydroxymethyldihydropteridin epyrophosphokinasechromosome CDS5266946 606 - 0.731023
NA Francci3_1860 cytochrome P450chromosome CDS2193488 1380 + 0.638406
NA Francci3_3640 acetolactate synthase, large subunit, biosynthetic typechromosome CDS4346845 1827 - 0.703339
NA Francci3_0867 thiamine Schromosome CDS1010506 375 + 0.685333
NA Francci3_1396 FAD dependent oxidoreductasechromosome CDS1677230 2685 - 0.744134
NA Francci3_4039 MoeA-like proteinchromosome CDS4823547 1458 - 0.739369
NA Francci3_2901 monooxygenase, FAD-bindingchromosome CDS3415734 1566 + 0.710728
NA Francci3_3742 aminotransferase, class I and IIchromosome CDS4478927 1311 - 0.692601
NA Francci3_0535 ubiquinone/menaquinone biosynthesis methyltransferaseschromosome CDS621479 726 + 0.730028
NA Francci3_1816 flavoproteinchromosome CDS2151472 552 - 0.721014
NA Francci3_0519 conserved hypothetical proteinchromosome CDS605148 1149 + 0.662315
NA Francci3_2762 putative methyltransferasechromosome CDS3255174 867 - 0.689735
NA Francci3_3557 riboflavin biosynthesis protein RibFchromosome CDS4254702 930 - 0.709677
NA Francci3_1748 GTP cyclohydrolase Ichromosome CDS2080581 579 - 0.642487
NA Francci3_0485 Shikimate/quinate 5-dehydrogenasechromosome CDS566859 1422 + 0.732771
NA Francci3_2016 aminotransferase, class I and IIchromosome CDS2367758 1233 - 0.643958
NA Francci3_0487 Uroporphyrinogen III synthase HEM4chromosome CDS569467 1824 + 0.739583
NA Francci3_3149 3-methyl-2-oxobutanoate hydroxymethyltransferasechromosome CDS3728020 891 + 0.723906
NA Francci3_1112 aspartate 1-decarboxylasechromosome CDS1326675 465 + 0.64086
NA Francci3_3130 Nicotinate-nucleotide-dimethylbenzimidazolephosphoribosyltransferasechromosome CDS3700755 1173 + 0.736573
NA Francci3_3076 thiazole biosynthesischromosome CDS3644041 1014 - 0.75641
NA Francci3_3839 dihydropteroate synthasechromosome CDS4600173 813 + 0.741697
NA Francci3_3637 D-3-phosphoglycerate dehydrogenasechromosome CDS4343388 1590 - 0.704403
NA Francci3_3020 anthranilate synthase component Ichromosome CDS3585978 1578 - 0.710393
NA Francci3_4092 S-adenosyl-L-homocysteine hydrolasechromosome CDS4900640 1185 + 0.633755
NA Francci3_3122 quinolinate synthetase complex, A subunitchromosome CDS3693726 1224 + 0.705065
NA Francci3_4378 nicotinate-nucleotide pyrophosphorylasechromosome CDS5227661 1044 + 0.746169
NA Francci3_2495 thiamine pyrophosphate enzyme-like TPP binding regionchromosome CDS2944039 1800 - 0.679444
NA Francci3_3747 thiamine-monophosphate kinasechromosome CDS4492272 1035 + 0.737198
NA Francci3_4089 transcriptional coactivator/pterin dehydratasechromosome CDS4897933 324 - 0.66358
NA Francci3_2604 cobalamin biosynthesis protein CobDchromosome CDS3073305 1101 - 0.765668
NA Francci3_1522 precorrin-6x reductasechromosome CDS1823058 807 - 0.747212
NA Francci3_2075 aminotransferase class-IIIchromosome CDS2440107 1386 - 0.690476
NA Francci3_1625 Dephospho-CoA kinasechromosome CDS1952516 690 + 0.744928
NA Francci3_0527 phosphoadenosine phosphosulfate reductasechromosome CDS612391 672 + 0.712798
NA Francci3_3631 branched-chain amino acid aminotransferasechromosome CDS4335775 927 - 0.652643
NA Francci3_4240 ABC transporter relatedchromosome CDS5058636 858 - 0.693473
NA Francci3_2657 Precorrin-6A synthase, deacetylatingchromosome CDS3137456 771 - 0.697795
NA Francci3_2519 Oxidoreductase FAD-binding regionchromosome CDS2975539 1053 - 0.607787
NA Francci3_3605 Coenzyme A biosynthesis proteinchromosome CDS4306418 489 - 0.568507
NA Francci3_4377 L-aspartate oxidasechromosome CDS5225964 1701 + 0.750735
NA Francci3_0533 conserved hypothetical proteinchromosome CDS619171 1188 + 0.678451
NA Francci3_3785 molybdopterin biosynthesis MoaEchromosome CDS4535739 558 - 0.727599
NA Francci3_1334 uroporphyrinogen decarboxylasechromosome CDS1601250 1110 + 0.727928
NA Francci3_3381 6-pyruvoyl tetrahydropterin synthase and hypothetical proteinchromosome CDS4011099 375 + 0.706667
NA Francci3_1181 bifunctional deaminase-reductase-likechromosome CDS1412232 852 + 0.687793
NA Francci3_2146 CMP/dCMP deaminase, zinc-bindingchromosome CDS2513327 453 - 0.677704
NA Francci3_0931 hypothetical proteinchromosome CDS1089235 1863 + 0.731079
NA Francci3_2043 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases-likechromosome CDS2403938 1440 - 0.700694
NA Francci3_1326 deoxyxylulose-5-phosphate synthasechromosome CDS1589995 1968 + 0.703252
NA Francci3_2298 cob(I)alamin adenosyltransferasechromosome CDS2678813 609 - 0.719212
NA Francci3_1232 putative nicotinate-nucleotide adenylyltransferasechromosome CDS1476707 588 + 0.683673
NA Francci3_1900 CMP/dCMP deaminase, zinc-bindingchromosome CDS2234057 453 + 0.688742
NA Francci3_3638 ketol-acid reductoisomerasechromosome CDS4345278 990 - 0.69495
NA Francci3_1263 Putative oxygen-independent coproporphyrinogen III oxidasechromosome CDS1508864 1236 + 0.722492
NA Francci3_2111 monooxygenase, FAD-bindingchromosome CDS2477263 1536 + 0.726562
NA Francci3_4315 GTP cyclohydrolase Ichromosome CDS5156709 654 + 0.674312
NA Francci3_3761 8-amino-7-oxononanoate synthasechromosome CDS4509891 1194 + 0.761307
NA Francci3_2296 putative bifunctional protein (CbiGH)chromosome CDS2676673 477 - 0.777778
NA Francci3_2068 Salicylate 1-monooxygenasechromosome CDS2432596 1158 - 0.682211
NA Francci3_1521 precorrin-3B C17-methyltransferasechromosome CDS1821425 1581 + 0.739405
NA Francci3_3867 putative pterin-4a-carbinolamine dehydratasechromosome CDS4630758 300 + 0.676667
NA Francci3_0517 3-octaprenyl-4-hydroxybenzoate carboxy-lyasechromosome CDS603764 783 + 0.727969
NA Francci3_1826 transcriptional coactivator/pterin dehydratasechromosome CDS2163952 315 - 0.67619
NA Francci3_1341 Sulfate adenylyltransferase, small subunitchromosome CDS1610147 915 + 0.689618
NA Francci3_0885 UBA/THIF-type NAD/FAD binding foldchromosome CDS1028638 1191 + 0.592779
NA Francci3_2649 amine oxidasechromosome CDS3127473 1497 + 0.640615
NA Francci3_0082 phosphoserine aminotransferase, putativechromosome CDS100068 1125 + 0.717333
NA Francci3_4187 biotin synthasechromosome CDS4998542 1092 - 0.684066
NA Francci3_3187 riboflavin synthase, alpha subunitchromosome CDS3776552 717 - 0.691771
NA Francci3_4476 UBA/THIF-type NAD/FAD binding foldchromosome CDS5348295 837 - 0.726404
NA Francci3_1335 protoporphyrinogen oxidasechromosome CDS1602461 1416 + 0.75565
NA Francci3_2067 aminotransferase class-IIIchromosome CDS2431322 1275 - 0.659608
NA Francci3_3994 conserved hypothetical proteinchromosome CDS4778674 555 - 0.691892
NA Francci3_2980 Precorrin-6y C5,15-methyltransferase, subunit CbiEchromosome CDS3522886 1437 - 0.748086
NA Francci3_0860 Nicotinate phosphoribosyltransferase relatedchromosome CDS1002373 1386 + 0.730159
NA Francci3_0796 uroporphyrin-III C-methyltransferasechromosome CDS928140 831 + 0.693141
NA Francci3_3075 Thiazole biosynthesis ThiHchromosome CDS3642878 1167 - 0.719794
NA Francci3_0507 glutamate-1-semialdehyde-2,1-aminomutasechromosome CDS592169 1359 + 0.718175
NA Francci3_0516 4-hydroxybenzoate polyprenyltransferase, putativechromosome CDS602790 960 + 0.698958
NA Francci3_1367 SNO glutamine amidotransferasechromosome CDS1642460 600 + 0.708333
NA Francci3_4407 dihydropteroate synthasechromosome CDS5268020 936 - 0.746795
NA Francci3_1534 hypothetical proteinchromosome CDS1839110 378 - 0.592593
NA Francci3_0552 Polyprenyl synthetasechromosome CDS641597 1017 + 0.703048
NA Francci3_3193 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligasechromosome CDS3784761 1311 - 0.74447
NA Francci3_4376 aspartate 1-decarboxylasechromosome CDS5225485 483 + 0.693582
NA Francci3_2415 Ketopantoate reductase ApbA/PanE-likechromosome CDS2803897 2064 - 0.758236
NA Francci3_3490 Molybdopterin-guanine dinucleotide biosynthesis protein A-likechromosome CDS4160937 1140 - 0.766667
NA Francci3_3435 conserved hypothetical proteinchromosome CDS4082974 846 + 0.699764
NA Francci3_3192 Methionine adenosyltransferasechromosome CDS3783523 1197 - 0.695906
NA Francci3_1209 Folylpolyglutamate synthase-likechromosome CDS1443249 1431 + 0.739343
NA Francci3_3138 lipoic acid synthetasechromosome CDS3711797 1002 + 0.698603
NA Francci3_1750 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases-likechromosome CDS2081734 1263 - 0.675376
NA Francci3_0486 porphobilinogen deaminasechromosome CDS568277 1188 + 0.740741
NA Francci3_0488 Porphobilinogen synthasechromosome CDS571287 1023 + 0.73607
NA Francci3_1366 Vitamin B6 biosynthesis proteinchromosome CDS1641531 933 + 0.713826
NA Francci3_4203 monooxygenase, FAD-bindingchromosome CDS5017446 1668 - 0.719424
NA Francci3_0233 ApbE-like lipoproteinchromosome CDS272851 882 + 0.756236
NA Francci3_1861 2-dehydropantoate 2-reductasechromosome CDS2194929 954 + 0.671908
NA Francci3_4511 glutamate--cysteine ligase, GCS2chromosome CDS5384708 1509 + 0.73161
NA Francci3_4037 molybdopterin binding domainchromosome CDS4822457 594 - 0.752525
NA Francci3_3491 molybdenum cofactor synthesis-likechromosome CDS4162130 987 - 0.719352
NA Francci3_3185 Riboflavin synthasechromosome CDS3774556 483 - 0.759834
NA Francci3_1518 Cobaltochelatase, CobN subunitchromosome CDS1814985 4095 - 0.729915
NA Francci3_0967 hypothetical proteinchromosome CDS1144677 345 + 0.713043
NA Francci3_2603 cobyric acid synthase CobQchromosome CDS3071746 1563 - 0.735765
NA Francci3_1692 hypothetical proteinchromosome CDS2029410 1311 + 0.757437
NA Francci3_4375 pantoate--beta-alanine ligasechromosome CDS5224337 1146 + 0.742583
NA Francci3_3131 cobalamin 5'-phosphate synthasechromosome CDS3701924 837 + 0.729988
NA Francci3_1755 6-pyruvoyl tetrahydropterin synthase and hypothetical proteinchromosome CDS2086421 435 - 0.611494
NA Francci3_2072 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)-likechromosome CDS2437071 699 - 0.648069
NA Francci3_1814 Radical SAMchromosome CDS2149801 1041 - 0.682037
NA Francci3_1358 Anthranilate synthase component I and chorismate binding proteinchromosome CDS1631097 1290 + 0.705426
NA Francci3_1815 transcriptional coactivator/pterin dehydratasechromosome CDS2151158 315 - 0.663492
NA Francci3_1345 bifunctional deaminase-reductase-likechromosome CDS1615008 822 - 0.737226
NA Francci3_3762 dethiobiotin synthasechromosome CDS4511115 717 + 0.750349
NA Francci3_0745 conserved hypothetical proteinchromosome CDS861113 2700 + 0.721111
NA Francci3_4454 adenosylhomocysteinasechromosome CDS5325675 1437 + 0.665971
NA Francci3_4437 glutamine amidotransferase of anthranilate synthase or para-aminobenzoate synthasechromosome CDS5305353 651 + 0.705069
NA Francci3_2299 von Willebrand factor, type Achromosome CDS2679418 2367 - 0.762146
NA Francci3_1208 FolC bifunctional proteinchromosome CDS1441752 1338 - 0.724215
NA Francci3_4041 5-formyltetrahydrofolate cyclo-ligasechromosome CDS4826717 780 + 0.724359
NA Francci3_2135 lipoate-protein ligase Bchromosome CDS2503041 666 + 0.717718
NA Francci3_1490 adenosylmethionine-8-amino-7-oxononanoateaminotr ansferasechromosome CDS1783358 1287 + 0.711733
NA Francci3_1388 Polyprenyl synthetasechromosome CDS1668334 1905 - 0.738583
NA Francci3_1828 putative pterin-4-alpha-carbinolamide dehydratasechromosome CDS2165856 300 - 0.626667
NA Francci3_2592 monooxygenase, FAD-bindingchromosome CDS3058658 1215 - 0.681481
NA Francci3_1523 precorrin-4 C11-methyltransferasechromosome CDS1823885 843 - 0.746145
NA Francci3_3186 GTP cyclohydrolase IIchromosome CDS3775035 1521 - 0.727811
NA Francci3_4015 UBA/THIF-type NAD/FAD binding foldchromosome CDS4802257 1431 - 0.697414
NA Francci3_0793 Uroporphyrinogen III synthase HEM4chromosome CDS923382 1152 - 0.741319
NA Francci3_4038 molybdenum cofactor biosynthesis protein Cchromosome CDS4823047 504 - 0.724206
NA Francci3_1838 5-formyltetrahydrofolate cyclo-ligasechromosome CDS2174457 789 + 0.69962
NA Francci3_2993 Methionine adenosyltransferasechromosome CDS3545565 1206 + 0.708126
NA Francci3_0822 Polyprenyl synthetasechromosome CDS958653 1017 + 0.726647