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2024-05-15 19:50:13

Gene list

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COG category: Coenzyme transport and metabolism
Organism: Salinibacter ruber DSM 13855, DSM 13855; M31

Number of genes found: 99

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Salinibacter ruber DSM 13855, DSM 13855; M31
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA SRU_1665 para-aminobenzoate/anthranilate synthase glutamine amidotransferasecomponent IISubName: Full=Para-aminobenzoate/anthranilate synthase glutamine amidotransferasecomponent II; EC=2.6.1.85; EC=4.1.3.27; chromosome CDS2068274 603 + 0.666667
NA SRU_1578 PIN domain protein, putativeSubName: Full=PIN domain protein, putative; chromosome CDS1961188 423 - 0.635934
NA SRU_1223 polyprenyl synthetaseSubName: Full=Polyprenyl synthetase; chromosome CDS1539244 1068 - 0.675094
NA SRU_0548 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS723096 858 + 0.712121
NA SRU_1499 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1865444 1143 + 0.607174
NA SRU_2041 ThiS family, putativeSubName: Full=ThiS family, putative; chromosome CDS2525463 294 + 0.690476
NA SRU_1447 putative pterin-4-alpha-carbinolamine dehydrataseRecName: Full=Putative pterin-4-alpha-carbinolamine dehydratase; Short=PHS; EC=4.2.1.96; AltName: Full=4-alpha-hydroxy-tetrahydropterin dehydratase; AltName: Full=Pterin carbinolamine dehydratase; chromosome CDS1800599 387 + 0.602067
NA SRU_2320 Magnesium chelatase, subunit ChlI familySubName: Full=Magnesium chelatase, subunit ChlI family; chromosome CDS2889645 1575 - 0.660317
NA SRU_0871 iron compound TonB-dependent receptor, putativeSubName: Full=Iron compound TonB-dependent receptor, putative; chromosome CDS1112537 1977 - 0.710673
NA SRU_1236 thiamine-phosphate pyrophosphorylaseSubName: Full=Thiamine-phosphate pyrophosphorylase; chromosome CDS1553494 633 + 0.703002
NA SRU_2648 conserved secreted Zn-dependent enzyme from deacylase/carboxypeptidase superfamily, putativeSubName: Full=Conserved secreted Zn-dependent enzyme from deacylase/carboxypeptidase superfamily, putative; chromosome CDS3280381 2865 + 0.705759
NA SRU_0653 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain proteinSubName: Full=D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein; chromosome CDS852333 966 + 0.715321
NA SRU_2420 dihydrofolate synthetaseSubName: Full=Dihydrofolate synthetase; chromosome CDS3021498 1308 + 0.745413
NA SRU_1510 riboflavin-specific deaminase/GTP cyclohydrolase IISubName: Full=Riboflavin-specific deaminase/GTP cyclohydrolase II; chromosome CDS1878759 1368 - 0.606725
NA SRU_1914 FAD binding domain, putativeSubName: Full=FAD binding domain, putative; chromosome CDS2362028 1497 - 0.726787
NA SRU_2864 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3546444 579 - 0.606218
NA SRU_1511 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1880528 816 + 0.620098
NA SRU_1631 5-formyltetrahydrofolate cyclo-ligaseSubName: Full=5-formyltetrahydrofolate cyclo-ligase; chromosome CDS2027252 588 + 0.671769
NA SRU_0364 5-formyltetrahydrofolate cyclo-ligaseSubName: Full=5-formyltetrahydrofolate cyclo-ligase; chromosome CDS497844 711 + 0.706048
NA SRU_0841 amine oxidase, flavin-containing superfamilySubName: Full=Amine oxidase, flavin-containing superfamily; chromosome CDS1072622 1365 - 0.681319
NA SRU_1685 chorismate binding enzymeSubName: Full=Chorismate binding enzyme; chromosome CDS2089860 1848 - 0.693723
NA SRU_1618 conserved proteinRecName: Full=Probable 2-phosphosulfolactate phosphatase; EC=3.1.3.71; chromosome CDS2012526 720 + 0.65
NA SRU_0613 methyltransferase domain proteinSubName: Full=Methyltransferase domain protein; chromosome CDS806019 633 + 0.470774
NA SRU_1293 hemin ABC transporter, ATP-binding proteinSubName: Full=Hemin ABC transporter, ATP-binding protein; chromosome CDS1630474 882 + 0.69161
NA SRU_0529 biotin--acetyl-CoA-carboxylase ligaseSubName: Full=Biotin--acetyl-CoA-carboxylase ligase; EC=6.3.4.15; chromosome CDS703064 798 - 0.721804
NA SRU_2101 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2595939 744 - 0.666667
NA SRU_1839 FolD bifunctional proteinRecName: Full=Bifunctional protein FolD; Includes: RecName: Full=Methylenetetrahydrofolate dehydrogenase; EC=1.5.1.5; Includes: RecName: Full=Methenyltetrahydrofolate cyclohydrolase; EC=3.5.4.9; chromosome CDS2273541 894 + 0.686801
NA SRU_1130 4'-phosphopantetheinyl transferase superfamily proteinSubName: Full=4-phosphopantetheinyl transferase superfamily protein; chromosome CDS1423404 1059 - 0.714825
NA SRU_2793 putative 6-pyruvoyl tetrahydropterin synthaseRecName: Full=6-carboxy-5,6,7,8-tetrahydropterin synthase; EC=4.-.-.-; chromosome CDS3452703 414 + 0.586957
NA SRU_2735 TonB-dependent receptor domain proteinSubName: Full=TonB-dependent receptor domain protein; chromosome CDS3380961 2505 - 0.680639
NA SRU_1392 oxygen-independent coproporphyrinogen III oxidase, putativeSubName: Full=Oxygen-independent coproporphyrinogen III oxidase, putative; chromosome CDS1742110 1122 - 0.721925
NA SRU_1577 AbgT putative transporter familySubName: Full=AbgT putative transporter family; chromosome CDS1959632 1542 + 0.658236
NA SRU_0542 aminotransferase, class IV superfamilySubName: Full=Aminotransferase, class IV superfamily; chromosome CDS718212 840 - 0.709524
NA SRU_2329 glutathione synthaseSubName: Full=Glutathione synthase; chromosome CDS2903056 948 - 0.687764
NA SRU_0239 lipoate-protein ligase ASubName: Full=Lipoate-protein ligase A; chromosome CDS319474 1137 - 0.675462
NA SRU_1350 putative isochorismate synthaseSubName: Full=Putative isochorismate synthase; chromosome CDS1696917 1539 + 0.725146
NA SRU_0669 D-3-phosphoglycerate dehydrogenaseSubName: Full=D-3-phosphoglycerate dehydrogenase; chromosome CDS872435 1539 - 0.671215
NA SRU_0455 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS609984 1047 + 0.69341
NA SRU_1508 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1877264 372 - 0.599462
ahcY SRU_1139 adenosylhomocysteinaseRecName: Full=Adenosylhomocysteinase; EC=3.3.1.1; AltName: Full=S-adenosyl-L-homocysteine hydrolase; chromosome CDS1434546 1278 + 0.64867
bioB SRU_0756 biotin synthaseRecName: Full=Biotin synthase; EC=2.8.1.6; chromosome CDS968906 1080 - 0.669444
bioF SRU_0517 8-amino-7-oxononanoate synthaseSubName: Full=8-amino-7-oxononanoate synthase; EC=2.3.1.47; chromosome CDS691144 1314 + 0.643836
coaBC SRU_0028 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligaseSubName: Full=Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; EC=4.1.1.36; EC=6.3.2.5; chromosome CDS27039 1242 - 0.701288
coaD SRU_2077 pantetheine-phosphate adenylyltransferaseRecName: Full=Phosphopantetheine adenylyltransferase; EC=2.7.7.3; AltName: Full=Dephospho-CoA pyrophosphorylase; AltName: Full=Pantetheine-phosphate adenylyltransferase; chromosome CDS2572023 495 - 0.664646
coaE SRU_2791 dephospho-CoA kinaseRecName: Full=Dephospho-CoA kinase; EC=2.7.1.24; AltName: Full=Dephosphocoenzyme A kinase; chromosome CDS3451404 600 - 0.661667
cysD SRU_0580 sulfate adenylate transferase, subunit 2SubName: Full=Sulfate adenylate transferase, subunit 2; EC=2.7.7.4; chromosome CDS764276 906 + 0.649007
cysH SRU_0422 phosophoadenylyl-sulfate reductase subfamilyRecName: Full=Phosphoadenosine phosphosulfate reductase; EC=1.8.4.8; AltName: Full=3-phosphoadenylylsulfate reductase; AltName: Full=PAPS reductase, thioredoxin dependent; AltName: Full=PAPS sulfotransferase; AltName: Full=PAdoPS reductase; chromosome CDS569303 759 + 0.665349
folA SRU_0412 dihydrofolate reductaseRecName: Full=Dihydrofolate reductase; EC=1.5.1.3; chromosome CDS557848 561 - 0.655971
folB SRU_0761 dihydroneopterin aldolaseSubName: Full=Dihydroneopterin aldolase; EC=4.1.2.25; chromosome CDS975403 429 + 0.641026
folE SRU_2794 GTP cyclohydrolase IRecName: Full=GTP cyclohydrolase 1; EC=3.5.4.16; AltName: Full=GTP cyclohydrolase I; chromosome CDS3453226 600 + 0.633333
folK SRU_0955 2-amino-4-hydroxy-6-hydroxymethyldihydropteridin epyrophosphokinaseSubName: Full=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; EC=2.7.6.3; chromosome CDS1221778 555 + 0.700901
folP SRU_1947 dihydropteroate synthaseSubName: Full=Dihydropteroate synthase; EC=2.5.1.15; chromosome CDS2408972 864 - 0.709491
hemA SRU_1555 glutamyl-tRNA reductaseRecName: Full=Glutamyl-tRNA reductase; Short=GluTR; EC=1.2.1.70; chromosome CDS1939392 1461 - 0.688569
hemB SRU_1013 delta-aminolevulinic acid dehydrataseSubName: Full=Delta-aminolevulinic acid dehydratase; EC=4.2.1.24; chromosome CDS1293212 1023 - 0.666667
hemC SRU_1554 porphobilinogen deaminaseRecName: Full=Porphobilinogen deaminase; Short=PBG; EC=2.5.1.61; AltName: Full=Hydroxymethylbilane synthase; AltName: Full=Pre-uroporphyrinogen synthase; chromosome CDS1938310 972 - 0.702675
hemD SRU_1553 uroporphyrinogen-III synthaseSubName: Full=Uroporphyrinogen-III synthase; EC=4.2.1.75; chromosome CDS1937521 789 - 0.728771
hemE SRU_1702 uroporphyrinogen decarboxylaseRecName: Full=Uroporphyrinogen decarboxylase; Short=UPD; Short=URO-D; EC=4.1.1.37; chromosome CDS2110687 1065 - 0.687324
hemF SRU_1742 coproporphyrinogen III oxidase, aerobicSubName: Full=Coproporphyrinogen III oxidase, aerobic; EC=1.3.3.3; chromosome CDS2153483 924 - 0.654762
hemG SRU_1215 protoporphyrinogen oxidaseSubName: Full=Protoporphyrinogen oxidase; EC=1.3.3.4; chromosome CDS1532068 1386 - 0.706349
hemH SRU_1741 ferrochelataseRecName: Full=Ferrochelatase; EC=4.99.1.1; AltName: Full=Heme synthase; AltName: Full=Protoheme ferro-lyase; chromosome CDS2152010 1344 - 0.685268
hemH SRU_2695 ferrochelataseRecName: Full=Ferrochelatase; EC=4.99.1.1; AltName: Full=Heme synthase; AltName: Full=Protoheme ferro-lyase; chromosome CDS3334178 1185 + 0.651477
hemL SRU_1740 glutamate-1-semialdehyde-2,1-aminomutaseRecName: Full=Glutamate-1-semialdehyde 2,1-aminomutase; Short=GSA; EC=5.4.3.8; AltName: Full=Glutamate-1-semialdehyde aminotransferase; Short=GSA-AT; chromosome CDS2149984 1341 - 0.662938
hemN SRU_0746 oxygen-independent coproporphyrinogen III oxidaseRecName: Full=Coproporphyrinogen-III oxidase; EC=1.3.99.22; chromosome CDS957306 1383 + 0.678959
idsA SRU_1874 polyprenyl synthetaseSubName: Full=Polyprenyl synthetase; chromosome CDS2316800 1029 - 0.707483
ilvB SRU_2145 acetolactate synthase, large subunit, biosynthetic typeSubName: Full=Acetolactate synthase, large subunit, biosynthetic type; EC=2.2.1.6; chromosome CDS2652438 1791 + 0.677834
ilvC SRU_2147 ketol-acid reductoisomeraseRecName: Full=Ketol-acid reductoisomerase; EC=1.1.1.86; AltName: Full=Acetohydroxy-acid isomeroreductase; AltName: Full=Alpha-keto-beta-hydroxylacyl reductoisomerase; chromosome CDS2655058 1047 + 0.65616
ilvE SRU_2317 branched-chain amino acid aminotransferaseSubName: Full=Branched-chain amino acid aminotransferase; EC=2.6.1.42; chromosome CDS2887237 942 - 0.644374
kbl SRU_0382 2-amino-3-ketobutyrate coenzyme A ligaseSubName: Full=2-amino-3-ketobutyrate coenzyme A ligase; EC=2.3.1.29; chromosome CDS522614 1194 - 0.660804
lipA SRU_0796 lipoic acid synthetaseRecName: Full=Lipoyl synthase; EC=2.8.1.8; AltName: Full=Lip-syn; AltName: Full=Lipoate synthase; AltName: Full=Lipoic acid synthase; AltName: Full=Sulfur insertion protein LipA; chromosome CDS1010140 1179 - 0.652248
lipB SRU_2551 lipoate-protein ligase BRecName: Full=Octanoyltransferase; EC=2.3.1.181; AltName: Full=Lipoate-protein ligase B; AltName: Full=Lipoyl/octanoyl transferase; AltName: Full=Octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase; chromosome CDS3167012 771 - 0.699092
menA SRU_1353 1,4-dihydroxy-2-naphthoate octaprenyltransferaseSubName: Full=1,4-dihydroxy-2-naphthoate octaprenyltransferase; EC=2.5.-.-; chromosome CDS1701392 969 + 0.693498
menB SRU_2766 naphthoate synthaseSubName: Full=Naphthoate synthase; EC=4.1.3.36; chromosome CDS3423563 894 - 0.686801
menD SRU_1351 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylaseRecName: Full=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase; Short=SEPHCHC synthase; EC=2.2.1.9; AltName: Full=Menaquinone biosynthesis protein MenD; chromosome CDS1698481 1776 + 0.721284
metK SRU_2755 S-adenosylmethionine synthetaseRecName: Full=S-adenosylmethionine synthase; Short=AdoMet synthase; EC=2.5.1.6; AltName: Full=MAT; AltName: Full=Methionine adenosyltransferase; chromosome CDS3409999 1161 + 0.674419
moaC SRU_1167 molybdenum cofactor biosynthesis protein CRecName: Full=Cyclic pyranopterin monophosphate synthase accessory protein; AltName: Full=Molybdenum cofactor biosynthesis protein C; chromosome CDS1468461 513 - 0.643275
nadA SRU_1912 quinolinate synthetase complex, A subunitSubName: Full=Quinolinate synthetase complex, A subunit; chromosome CDS2359898 1095 - 0.666667
nadC SRU_1913 nicotinate-nucleotide pyrophosphorylaseSubName: Full=Nicotinate-nucleotide pyrophosphorylase; EC=2.4.2.19; chromosome CDS2361049 855 - 0.715789
nadD SRU_2072 nicotinate (nicotinamide) nucleotide adenylyltransferaseRecName: Full=Probable nicotinate-nucleotide adenylyltransferase; EC=2.7.7.18; AltName: Full=Deamido-NAD(+) diphosphorylase; AltName: Full=Deamido-NAD(+) pyrophosphorylase; AltName: Full=Nicotinate mononucleotide adenylyltransferase; Short=NaMN adenylyltransferase; chromosome CDS2566376 588 - 0.664966
panB SRU_1843 3-methyl-2-oxobutanoate hydroxymethyltransferaseRecName: Full=3-methyl-2-oxobutanoate hydroxymethyltransferase; EC=2.1.2.11; AltName: Full=Ketopantoate hydroxymethyltransferase; Short=KPHMT; chromosome CDS2276859 798 - 0.691729
panC SRU_1411 pantoate--beta-alanine ligaseRecName: Full=Pantothenate synthetase; Short=PS; EC=6.3.2.1; AltName: Full=Pantoate--beta-alanine ligase; AltName: Full=Pantoate-activating enzyme; chromosome CDS1766284 888 + 0.671171
panD SRU_1412 aspartate 1-decarboxylaseRecName: Full=Aspartate 1-decarboxylase; EC=4.1.1.11; AltName: Full=Aspartate alpha-decarboxylase; Contains: RecName: Full=Aspartate 1-decarboxylase beta chain; Contains: RecName: Full=Aspartate 1-decarboxylase alpha chain; Flags: Precursor; chromosome CDS1767213 441 + 0.630385
pdxA SRU_1006 4-hydroxythreonine-4-phosphate dehydrogenaseRecName: Full=4-hydroxythreonine-4-phosphate dehydrogenase; EC=1.1.1.262; AltName: Full=4-(phosphohydroxy)-L-threonine dehydrogenase; chromosome CDS1285887 1209 + 0.690653
pdxB SRU_2082 erythronate-4-phosphate dehydrogenaseRecName: Full=Erythronate-4-phosphate dehydrogenase; EC=1.1.1.290; chromosome CDS2576703 1179 - 0.709076
pdxH SRU_0544 pyridoxamine 5'-phosphate oxidaseRecName: Full=Pyridoxine/pyridoxamine 5-phosphate oxidase; EC=1.4.3.5; AltName: Full=PNP/PMP oxidase; Short=PNPOx; AltName: Full=Pyridoxal 5-phosphate synthase; chromosome CDS719798 648 - 0.694444
pdxJ SRU_2080 Pyridoxal phosphate biosynthesis protein PdxJRecName: Full=Pyridoxine 5-phosphate synthase; Short=PNP synthase; EC=2.6.99.2; chromosome CDS2575007 732 + 0.687158
pncB SRU_0348 putative nicotinate phosphoribosyltransferaseRecName: Full=Nicotinate phosphoribosyltransferase; EC=6.3.4.21; chromosome CDS466337 1389 - 0.691865
ribBA SRU_0012 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase IISubName: Full=3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II; EC=3.5.4.25; chromosome CDS11129 1248 + 0.663462
ribD SRU_2302 riboflavin biosynthesis protein RibDRecName: Full=Riboflavin biosynthesis protein RibD; chromosome CDS2867408 1122 + 0.721925
ribE SRU_2303 riboflavin synthase, alpha subunitSubName: Full=Riboflavin synthase, alpha subunit; EC=2.5.1.9; chromosome CDS2868590 654 + 0.67737
ribE SRU_1068 6,7-dimethyl-8-ribityllumazine synthaseRecName: Full=6,7-dimethyl-8-ribityllumazine synthase; Short=DMRL synthase; Short=LS; Short=Lumazine synthase; EC=2.5.1.78; chromosome CDS1341951 471 + 0.685775
ribF SRU_1775 riboflavin biosynthesis protein RibFSubName: Full=Riboflavin biosynthesis protein RibF; EC=2.7.1.26; EC=2.7.7.2; chromosome CDS2192850 936 - 0.632479
serC SRU_2207 phosphoserine aminotransferaseRecName: Full=Phosphoserine aminotransferase; EC=2.6.1.52; AltName: Full=Phosphohydroxythreonine aminotransferase; chromosome CDS2737825 1110 - 0.671171
thiD SRU_1237 phosphomethylpyrimidine kinaseSubName: Full=Phosphomethylpyrimidine kinase; EC=2.7.4.7; chromosome CDS1554175 873 + 0.688431
thiE SRU_1552 thiamine-phosphate pyrophosphorylaseRecName: Full=Thiamine-phosphate synthase; Short=TP synthase; Short=TPS; EC=2.5.1.3; AltName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP pyrophosphorylase; Short=TMP-PPase; chromosome CDS1936836 684 + 0.694444
thiG SRU_1235 Thiazole biosynthesis protein ThiGRecName: Full=Thiazole synthase; EC=2.8.1.10; chromosome CDS1552317 822 + 0.681265
thiL SRU_2426 thiamine-monophosphate kinaseRecName: Full=Thiamine-monophosphate kinase; Short=TMP kinase; Short=Thiamine-phosphate kinase; EC=2.7.4.16; chromosome CDS3029854 1083 + 0.679594
thiS SRU_1234 thiamine biosynthesis protein ThiSSubName: Full=Thiamine biosynthesis protein ThiS; chromosome CDS1552026 243 + 0.679012
trpE SRU_1662 anthranilate synthase component ISubName: Full=Anthranilate synthase component I; EC=4.1.3.27; chromosome CDS2064907 1572 + 0.687023
ubiE SRU_0824 ubiquinone/menaquinone biosynthesis methyltransferase UbiERecName: Full=Demethylmenaquinone methyltransferase; EC=2.1.1.163; AltName: Full=Menaquinone biosynthesis C-methyltransferase UbiE; chromosome CDS1046228 735 - 0.703401