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2024-05-06 15:24:27

Gene list

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COG category: Coenzyme transport and metabolism
Organism: Rhizobium etli CFN 42, CFN 42

Number of genes found: 130

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Rhizobium etli CFN 42, CFN 42
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA RHE_PF00337 hypothetical conserved proteinp42f CDS378090 477 - 0.633124
NA RHE_CH01195 probable NH(3)-dependent NAD(+)synthetase proteinchromosome CDS1249809 834 + 0.657074
NA RHE_PF00271 probable iron ABC transporter, ATP-binding proteinp42f CDS294983 762 + 0.637795
NA RHE_CH02023 probable oxygenase (tetracycline 6-hydroxylase) proteinchromosome CDS2115079 1494 + 0.65328
NA RHE_CH03621 probable 2-hydroxyacid dehydrogenase proteinchromosome CDS3831856 957 - 0.619645
NA RHE_CH04030 hypothetical conserved proteinchromosome CDS4267476 651 + 0.642089
NA RHE_CH01710 probable 2-dehydropantoate 2-reductase (ketopantoate reductase) proteinchromosome CDS1791706 999 - 0.617618
NA RHE_CH01520 putative beta-D-1,6 glucosyltransferase proteinchromosome CDS1598817 2373 - 0.555836
NA RHE_CH01962 probable 2-octaprenyl-6-methoxyphenol hydroxylase proteinchromosome CDS2046568 1074 + 0.656425
NA RHE_CH02034 probable monooxygenase proteinchromosome CDS2127089 1515 - 0.666667
NA RHE_CH03209 putative methyltransferase proteinchromosome CDS3371230 711 - 0.548523
NA RHE_CH00138 probable D-2-hydroxyacid dehydrogenase proteinchromosome CDS147023 1002 + 0.636727
NA RHE_CH00076 probable D-2-hydroxyacid dehydrogenase proteinchromosome CDS82475 1011 + 0.647873
NA RHE_PF00202 probableadenosylmethionine--8-amino-7-oxononanoa teaminotransferaseproteinp42f CDS212845 1380 + 0.612319
NA RHE_CH01108 hypothetical proteinchromosome CDS1158150 894 + 0.491051
NA RHE_CH01953 probable D-alanine aminotransferase proteinchromosome CDS2037874 864 + 0.613426
NA RHE_PF00282 probable nucleotide permease proteinp42f CDS311590 1287 - 0.615385
NA RHE_CH01549 probable 3-demethylubiquinone-9 3-methyltransferase proteinchromosome CDS1628023 633 - 0.565561
NA RHE_CH02433 probable 3-hydroxyisobutyrate dehydrogenase proteinchromosome CDS2542448 1314 + 0.601218
NA RHE_CH02145 probableadenosylmethionine--8-amino-7-oxononanoa teaminotransferaseproteinchromosome CDS2246914 1383 + 0.582791
NA RHE_PF00007 hypothetical conserved proteinp42f CDS7904 450 - 0.624444
NA RHE_CH00980 hypothetical conserved proteinchromosome CDS1029911 645 + 0.652713
NA RHE_CH02680 probable ferrichrome ABC transporter, ATP-binding proteinchromosome CDS2792521 813 - 0.637146
NA RHE_CH02579 probable dihydrofolate reductase proteinchromosome CDS2689898 642 + 0.626168
NA RHE_CH00295 putative reductase proteinchromosome CDS302165 531 - 0.591337
NA RHE_CH02394 putative iron ABC transporter, ATP-binding proteinchromosome CDS2504878 267 + 0.632959
NA RHE_CH03551 putative aminotransferase proteinchromosome CDS3740467 678 + 0.643068
NA RHE_CH03976 probable FAD-dependent monooxygenase proteinchromosome CDS4202831 1215 + 0.639506
NA RHE_CH03137 hypothetical conserved proteinchromosome CDS3288206 648 + 0.648148
NA RHE_PF00449 putative pyruvate decarboxylase proteinp42f CDS502380 1656 + 0.541667
NA RHE_CH03090 probableadenosylmethionine--8-amino-7-oxononanoa teaminotransferaseproteinchromosome CDS3234635 1326 + 0.616139
NA RHE_PF00379 putative phosphoglycerate dehydrogenase proteinp42f CDS427557 975 - 0.649231
NA RHE_CH00552 putative pyrimidine reductase protein (dihydrofolate reductase family)chromosome CDS568644 558 - 0.575269
NA RHE_PF00349 probableadenosylmethionine--8-amino-7-oxononanoa teaminotransferaseproteinp42f CDS390889 1377 + 0.646333
NA RHE_CH03427 putative integral membrane prenyltransferase proteinchromosome CDS3605481 1752 - 0.583333
NA RHE_CH03471 probable 5-formyltetrahydrofolate cyclo-ligase proteinchromosome CDS3656537 645 + 0.618605
NA RHE_CH01024 probable phosphoglycerate dehydrogenase proteinchromosome CDS1076496 3015 + 0.652405
NA RHE_CH00179 probable hydroxyacid dehydrogenase proteinchromosome CDS195300 960 + 0.607292
NA RHE_CH02822 putative pyrimidine reductase proteinchromosome CDS2943906 666 + 0.638138
NA RHE_CH02647 probable menaquinone biosynthesis methyltransferase proteinchromosome CDS2759635 1056 + 0.5625
NA RHE_PF00336 putative D-2-hydroxyacid dehydrogenase proteinp42f CDS377157 924 + 0.646104
NA RHE_PF00434 probable beta-alanine-pyruvate aminotransferase proteinp42f CDS486351 1335 + 0.637453
ahcY RHE_CH00031 adenosylhomocysteinase proteinchromosome CDS34157 1401 - 0.603854
bioA RHE_CH01316 adenosylmethionine-8-amino-7-oxononanoate aminotransferase proteinchromosome CDS1373801 1368 + 0.625731
birA RHE_CH01619 biotin--[acetyl-CoA carboxylase] synthetase proteinchromosome CDS1699750 765 + 0.637909
coaA RHE_CH00040 pantothenate kinase proteinchromosome CDS42712 996 - 0.587349
coaD RHE_CH02113 phosphopantetheine adenylyltransferase proteinchromosome CDS2214193 495 + 0.618182
coaE RHE_CH00004 dephospho-CoA kinase proteinchromosome CDS2775 612 + 0.581699
cobA RHE_CH02484 uroporphyrin-III C-methyltransferase proteinchromosome CDS2595314 840 - 0.666667
cobB RHE_CH02483 cobyrinic acid A,C-diamide synthase proteinchromosome CDS2594010 1308 - 0.659021
cobD RHE_CH02481 cobalamin biosynthesis proteinchromosome CDS2592029 981 - 0.638124
cobE RHE_CH02486 precorrin-3B C17-methyltransferase proteinchromosome CDS2597508 540 - 0.62963
cobN RHE_CH02489 cobalamin biosynthesis proteinchromosome CDS2599472 3834 - 0.650496
cobO RHE_CH02488 cob(I)alamin adenosyltransferase proteinchromosome CDS2598837 636 - 0.606918
cobP RHE_CH02491 bifunctional cobinamide kinase/cobinamide phosphateguanylyltransferasechromosome CDS2604371 510 - 0.621569
cobQ RHE_CH02494 cobyric acid synthase proteinchromosome CDS2609057 1455 - 0.65567
cobT RHE_CH03820 cobalamin biosynthesis proteinchromosome CDS4043191 1902 - 0.65878
cobU RHE_CH02443 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase proteinchromosome CDS2553174 1017 - 0.66765
cobV RHE_CH02444 cobalamin (5`-phosphate) synthase proteinchromosome CDS2554363 783 + 0.652618
cysD RHE_CH01131 sulfate adenylyltransferase subunit 2 protein (cysteine biosynthesis protein)chromosome CDS1183811 954 - 0.626834
cysG RHE_CH01958 uroporphyrin-III C-methyltransferase proteinchromosome CDS2042437 1437 + 0.651357
cysH RHE_CH01132 phosphoadenosine-phosphosulfate reductase proteinchromosome CDS1184879 738 - 0.647696
dfp RHE_CH00342 phosphopantothenate-cysteine ligase/phosphopantothenoylcysteine decarboxylase proteinchromosome CDS352386 1209 - 0.653433
dxs RHE_CH00913 1-deoxy-D-xylulose-5-phosphate synthase proteinchromosome CDS962175 1917 - 0.658842
exsC RHE_CH03712 6-pyruvoyl tetrahydropterin synthase proteinchromosome CDS3933749 360 + 0.586111
folA RHE_CH02798 dihydrofolate reductase proteinchromosome CDS2913000 519 - 0.633911
folB RHE_CH02335 dihydroneopterin aldolase proteinchromosome CDS2436307 366 - 0.612022
folC RHE_CH00024 bifunctional folylpolyglutamate synthase/dihydrofolate syntasechromosome CDS20620 1296 + 0.62037
folDch RHE_CH00694 methylenetetrahydrofolate dehydrogenase/cyclohydrolase proteinchromosome CDS712241 900 + 0.648889
folE RHE_CH02201 GTP cyclohydrolase I proteinchromosome CDS2306882 615 + 0.606504
folK RHE_CH02334 7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinas e proteinchromosome CDS2435796 519 - 0.65896
folP RHE_CH02336 dihydropteroate synthase proteinchromosome CDS2436669 906 - 0.640177
frcK RHE_CH00468 pantothenate kinase proteinchromosome CDS481421 633 + 0.64613
gsh RHE_CH00803 glutamate-cysteine ligase proteinchromosome CDS840665 1374 - 0.625182
gshB RHE_CH00322 glutathione synthetase proteinchromosome CDS327589 948 + 0.624473
hemAch RHE_CH03846 8-amino-7-oxononanoate synthase proteinchromosome CDS4070328 1215 - 0.616461
hemAf RHE_PF00489 5-aminolevulinate synthase proteinp42f CDS552978 1215 - 0.613169
hemB RHE_CH01504 delta-aminolevulinic acid dehydratase proteinchromosome CDS1581331 1014 - 0.623274
hemC RHE_CH03904 porphobilinogen deaminase proteinchromosome CDS4135810 930 + 0.670968
hemD RHE_CH03905 uroporphyrinogen-III synthase proteinchromosome CDS4136747 708 + 0.64548
hemE RHE_CH04126 uroporphyrinogen decarboxylase proteinchromosome CDS4380637 972 - 0.611111
hemF RHE_CH03046 coproporphyrinogen III oxidase proteinchromosome CDS3187458 912 + 0.626096
hemH RHE_CH03556 ferrochelatase (protoheme ferro-lyase) proteinchromosome CDS3746004 1035 + 0.591304
hemNch RHE_CH00360 coproporphyrinogen III oxidase proteinchromosome CDS373352 1203 - 0.638404
hemNf RHE_PF00519 coproporphyrinogen III oxidase proteinp42f CDS584941 1353 - 0.624538
ilvB RHE_PF00274 acetolactate synthase, large subunit protein (thiamine pyrophosphate-dependent enzyme)p42f CDS297588 1626 + 0.615621
ilvC RHE_CH02744 ketol-acid reductoisomerase proteinchromosome CDS2857820 1020 - 0.617647
ilvE1 RHE_CH01190 branched-chain-amino-acid aminotransferase proteinchromosome CDS1243141 888 + 0.656532
ilvE2 RHE_CH02730 branched-chain amino acid aminotransferase proteinchromosome CDS2844079 1101 + 0.637602
ilvG RHE_CH02878 acetolactate synthase II, large subunit proteinchromosome CDS3008454 1659 + 0.637734
ilvI RHE_CH02790 acetolactate synthase III, large subunit proteinchromosome CDS2901668 1758 - 0.614903
ispA RHE_CH04011 geranyltranstransferase proteinchromosome CDS4248316 996 - 0.659639
ispB RHE_CH00875 octaprenyl-diphosphate synthase proteinchromosome CDS916101 1041 - 0.630163
kbl RHE_CH02952 2-amino-3-ketobutyrate CoA ligase proteinchromosome CDS3081429 1188 - 0.614478
lipA RHE_CH01941 lipoic acid synthetase proteinchromosome CDS2023838 972 + 0.62037
lipB RHE_CH02223 lipoate biosynthesis proteinchromosome CDS2325858 720 + 0.648611
metK RHE_CH00370 S-adenosylmethionine synthetase proteinchromosome CDS381290 1254 - 0.636364
moaA RHE_CH02392 molybdenum cofactor biosynthesis proteinchromosome CDS2503210 1047 + 0.614136
moaB RHE_CH00872 molybdenum cofactor biosynthesis proteinchromosome CDS912689 552 - 0.634058
moaC RHE_CH02176 molybdenum cofactor biosynthesis proteinchromosome CDS2280241 444 + 0.641892
moaD RHE_CH01477 molybdopterin converting factor subunit 1 proteinchromosome CDS1548454 255 - 0.580392
moaE RHE_CH01476 molybdopterin converting factor subunit 2 proteinchromosome CDS1547734 462 - 0.647186
mobA RHE_CH02406 molybdopterin-guanine dinucleotide biosynthesis proteinchromosome CDS2517409 537 + 0.659218
mobB RHE_CH02407 molybdopterin-guanine dinucleotide biosynthesis proteinchromosome CDS2517942 519 + 0.637765
moeA RHE_CH02177 molybdopterin biosynthesis proteinchromosome CDS2280681 1224 + 0.665033
moeB RHE_CH00140 molybdopterin biosynthesis proteinchromosome CDS148526 768 - 0.641927
nadD RHE_CH04070 nicotinate-nucleotide adenylyltransferase proteinchromosome CDS4313781 579 + 0.645941
nah RHE_CH01900 salicylate hydroxylase proteinchromosome CDS1982969 1155 - 0.640693
pabB RHE_CH03550 para-aminobenzoate synthase component I proteinchromosome CDS3739361 1158 + 0.607081
panB RHE_PF00002 ketopantoate hydroximethyltransferase proteinp42f CDS1599 822 + 0.63017
panC RHE_PF00001 pantoate beta alanine ligase proteinp42f CDS709 894 + 0.628635
pcbD RHE_CH03934 pterin-4-alpha-carbinolamine dehydratase proteinchromosome CDS4163574 306 - 0.581699
pdxAch RHE_CH01450 4-hydroxythreonine-4-phosphate dehydrogenase proteinchromosome CDS1520077 1029 - 0.644315
pdxH RHE_CH00941 pyridoxamine 5`-phosphate oxidase proteinchromosome CDS991153 621 + 0.608696
pdxJ RHE_CH02769 pyridoxal phosphate biosynthetic (pyridoxine 5`-phosphate synthase) proteinchromosome CDS2885188 753 - 0.628154
pncB RHE_CH00181 nicotinate phosphoribosyltransferase proteinchromosome CDS196933 1305 + 0.609962
pobA RHE_CH03444 4-hydroxybenzoate hydroxylase proteinchromosome CDS3627348 1188 + 0.614478
ribD RHE_CH01510 5-amino-6-(5- phosphoribosylamino)uracilreductase/ diaminohydroxyphosphoribosylaminopyrimidinedeami nase proteinchromosome CDS1587303 1308 + 0.649847
ribE RHE_CH01511 riboflavin synthase, alpha chain proteinchromosome CDS1588610 612 + 0.622549
ribF RHE_CH00831 riboflavin kinase/FMN adenylyltransferase proteinchromosome CDS869951 984 + 0.629065
ribH1 RHE_CH01525 riboflavin synthase, beta chain proteinchromosome CDS1604413 456 + 0.600877
ribH2 RHE_CH02688 riboflavin synthase, beta chain proteinchromosome CDS2799989 435 + 0.63908
serA RHE_CH03454 D-3-phosphoglycerate dehydrogenase proteinchromosome CDS3637128 1596 - 0.609649
serC RHE_CH03455 phosphoserine aminotransferase proteinchromosome CDS3638806 1179 - 0.634436
thiEch RHE_CH03527 thiamine-phosphate pyrophosphorylase proteinchromosome CDS3717617 744 - 0.619624
trpE RHE_CH03075 anthranilate synthase includes: glutamine amidotransferase proteinchromosome CDS3215235 2190 - 0.628767
ubiA RHE_CH00895 4-hydroxybenzoate octaprenyltransferase proteinchromosome CDS939652 960 + 0.620833
ubiE RHE_CH00354 ubiquinone/menaquinone biosynthesis methyltransferase proteinchromosome CDS366574 777 - 0.616474
ubiG RHE_CH03759 3-demethylubiquinone-9 3-methyltransferase proteinchromosome CDS3987345 747 + 0.615797
vbsP RHE_PF00455 phosphopantetheinyl transferase proteinp42f CDS511806 720 + 0.665278