Gene list
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COG category: Coenzyme transport and metabolism
Organism: Thiobacillus denitrificans ATCC 25259, ATCC 25259
Number of genes found: 122
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| Thiobacillus denitrificans ATCC 25259, ATCC 25259 | ||||||||
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| Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
| NA | Tbd_2566 | uroporphyrin-III C-methyltransferase | chromosome | CDS | 2640404 | 1032 | - | 0.69186 |
| NA | Tbd_2193 | thiamine-monophosphate kinase | chromosome | CDS | 2274192 | 954 | + | 0.713836 |
| NA | Tbd_2441 | nicotinate-nucleotide adenylyltransferase | chromosome | CDS | 2510263 | 681 | - | 0.690162 |
| NA | Tbd_1545 | 4-amino-4-deoxychorismate lyase | chromosome | CDS | 1629331 | 807 | - | 0.698885 |
| NA | Tbd_0479 | putative oxygen-independent coproporphyrinogen III oxidase | chromosome | CDS | 500960 | 1179 | + | 0.672604 |
| NA | Tbd_2565 | putative protein porphyrin biosynthesis | chromosome | CDS | 2639232 | 1173 | - | 0.676044 |
| NA | Tbd_0863 | trans-hexaprenyltranstransferase | chromosome | CDS | 913981 | 1032 | - | 0.617248 |
| NA | Tbd_2587 | DNA/pantothenate metabolism flavoprotein | chromosome | CDS | 2662807 | 1176 | - | 0.70068 |
| NA | Tbd_0215 | ubiquinone/menaquinone biosynthesis methyltransferase | chromosome | CDS | 235913 | 735 | - | 0.644898 |
| NA | Tbd_0242 | GTP cyclohydrolase I | chromosome | CDS | 265418 | 621 | - | 0.661836 |
| NA | Tbd_2390 | adenylyltransferase | chromosome | CDS | 2462748 | 756 | - | 0.693122 |
| NA | Tbd_0320 | 8-amino-7-oxononanoate synthase | chromosome | CDS | 343920 | 1161 | + | 0.710594 |
| NA | Tbd_2083 | Pyridoxal phosphate biosynthetic protein PdxJ | chromosome | CDS | 2176259 | 741 | - | 0.680162 |
| NA | Tbd_2224 | glutamine amidotransferase of anthranilate synthase | chromosome | CDS | 2303788 | 570 | - | 0.626316 |
| NA | Tbd_2339 | 4-hydroxythreonine-4-phosphate dehydrogenase PdxA | chromosome | CDS | 2414289 | 987 | + | 0.720365 |
| NA | Tbd_0814 | nicotinate-nucleotide pyrophosphorylase | chromosome | CDS | 854877 | 846 | - | 0.691489 |
| NA | Tbd_2567 | uroporphyrinogen-III synthase | chromosome | CDS | 2641432 | 759 | - | 0.72859 |
| NA | Tbd_2189 | Lumazine-binding protein | chromosome | CDS | 2271472 | 606 | + | 0.666667 |
| NA | Tbd_1044 | putative cobalamin biosynthesis transmembrane protein | chromosome | CDS | 1108797 | 918 | + | 0.686275 |
| NA | Tbd_2724 | 5-formyltetrahydrofolate cyclo-ligase family protein | chromosome | CDS | 2802645 | 600 | + | 0.71 |
| NA | Tbd_2720 | iron complex outermembrane recepter protein | chromosome | CDS | 2799650 | 1896 | - | 0.652426 |
| NA | Tbd_0267 | D-alanine transminase | chromosome | CDS | 288750 | 849 | + | 0.671378 |
| NA | Tbd_0879 | deoxyxylulose-5-phosphate synthase | chromosome | CDS | 928492 | 1857 | - | 0.691438 |
| NA | Tbd_2718 | ATP:corrinoid adenosyltransferase BtuR/CobO/CobP | chromosome | CDS | 2798390 | 609 | - | 0.671593 |
| NA | Tbd_1026 | molybdopterin converting factor, subunit 1 | chromosome | CDS | 1093943 | 252 | + | 0.690476 |
| NA | Tbd_1681 | hypothetical protein | chromosome | CDS | 1769302 | 504 | + | 0.509921 |
| NA | Tbd_0449 | hypothetical protein | chromosome | CDS | 469503 | 339 | + | 0.557522 |
| NA | Tbd_2054 | pantoate-beta-alanine ligase | chromosome | CDS | 2141329 | 852 | + | 0.693662 |
| NA | Tbd_2461 | coproporphyrinogen III oxidase | chromosome | CDS | 2531953 | 912 | + | 0.677632 |
| NA | Tbd_0460 | biotin--acetyl-CoA-carboxylase ligase | chromosome | CDS | 483690 | 996 | + | 0.676707 |
| NA | Tbd_0880 | polyprenyl synthetase | chromosome | CDS | 930350 | 891 | - | 0.69697 |
| NA | Tbd_0027 | NUDIX hydrolase | chromosome | CDS | 27478 | 939 | - | 0.71246 |
| NA | Tbd_0380 | panththeine-phosphate adenylyltransferase | chromosome | CDS | 408401 | 483 | + | 0.641822 |
| NA | Tbd_2053 | ketopantoate hydroxymethyltransferase | chromosome | CDS | 2140541 | 789 | + | 0.702155 |
| NA | Tbd_1454 | conserved hypothetical protein | chromosome | CDS | 1537707 | 1233 | + | 0.716139 |
| NA | Tbd_2492 | glutamyl-tRNA reductase | chromosome | CDS | 2565117 | 1251 | + | 0.677058 |
| NA | Tbd_1841 | pterin 4 alpha carbinolamine dehydratase | chromosome | CDS | 1938538 | 342 | + | 0.605263 |
| NA | Tbd_0104 | Carboxylyase-related protein | chromosome | CDS | 111108 | 1464 | - | 0.665984 |
| NA | Tbd_0569 | Molybdopterin cofactor biosynthesis MoaC region | chromosome | CDS | 597376 | 480 | + | 0.652083 |
| NA | Tbd_1546 | anthranilate synthase | chromosome | CDS | 1630134 | 1329 | - | 0.681716 |
| NA | Tbd_1856 | riboflavin kinase | chromosome | CDS | 1949678 | 930 | + | 0.676344 |
| NA | Tbd_2039 | dihydrofolate reductase | chromosome | CDS | 2128195 | 504 | - | 0.684524 |
| NA | Tbd_0191 | conserved hypothetical protein | chromosome | CDS | 203494 | 876 | + | 0.656393 |
| NA | Tbd_2049 | putative Fe3+-siderophores transport system ATPase | chromosome | CDS | 2137182 | 738 | + | 0.738482 |
| NA | Tbd_2367 | dephospho-CoA kinase | chromosome | CDS | 2441333 | 609 | - | 0.691297 |
| NA | Tbd_0093 | adenosylmethionine--8-amino-7-oxononanoateaminot ransferase | chromosome | CDS | 98567 | 1395 | + | 0.688172 |
| NA | Tbd_2714 | cobyric acid synthase CobQ | chromosome | CDS | 2794355 | 1503 | - | 0.709913 |
| NA | Tbd_2314 | 6-pyruvoyl tetrahydrobiopterin synthase | chromosome | CDS | 2388888 | 369 | - | 0.672087 |
| NA | Tbd_2381 | dihydroneopterin aldolase | chromosome | CDS | 2454550 | 363 | - | 0.61157 |
| NA | Tbd_1060 | hypothetical protein | chromosome | CDS | 1122646 | 378 | - | 0.616402 |
| NA | Tbd_1770 | putative flavodoxin oxidoreductase | chromosome | CDS | 1868142 | 1461 | - | 0.64271 |
| NA | Tbd_2055 | aspartate decarboxylase | chromosome | CDS | 2142261 | 381 | + | 0.635171 |
| NA | Tbd_0950 | D-isomer specific 2-hydroxyacid dehydrogenase | chromosome | CDS | 1012196 | 1176 | + | 0.67432 |
| NA | Tbd_2126 | thiamine biosynthesis protein ThiG | chromosome | CDS | 2213861 | 789 | - | 0.648923 |
| NA | Tbd_0189 | delta-aminolevulinic acid dehydratase, porphobilinogen synthase | chromosome | CDS | 201632 | 1011 | + | 0.660732 |
| NA | Tbd_0042 | molybdopterin-guanine dinucleotide biosynthesis protein A | chromosome | CDS | 43678 | 561 | + | 0.714795 |
| NA | Tbd_0949 | phosphoserine aminotransferase | chromosome | CDS | 1011124 | 1080 | + | 0.64537 |
| NA | Tbd_0481 | GTP cyclohydrolase I | chromosome | CDS | 503097 | 648 | + | 0.709877 |
| NA | Tbd_0708 | probable thiamine biosynthesis lipoprotein apbE precursor transmembrane | chromosome | CDS | 747566 | 864 | - | 0.726852 |
| NA | Tbd_2448 | hypothetical protein | chromosome | CDS | 2517955 | 252 | - | 0.595238 |
| NA | Tbd_2716 | cobalamin biosynthesis protein CbiB | chromosome | CDS | 2796812 | 933 | - | 0.719185 |
| NA | Tbd_2710 | cobalamin-5-phosphate synthase CobS | chromosome | CDS | 2791468 | 744 | - | 0.723118 |
| NA | Tbd_2051 | 7, 8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK | chromosome | CDS | 2139395 | 507 | + | 0.700197 |
| NA | Tbd_0946 | ubiquinone biosynthesis O-methyltransferase | chromosome | CDS | 1006439 | 699 | - | 0.653791 |
| NA | Tbd_1027 | molybdenum cofactor biosynthesis protein E | chromosome | CDS | 1094197 | 456 | + | 0.701754 |
| NA | Tbd_0689 | methylenetetrahydrofolate cyclohydrolase | chromosome | CDS | 729447 | 855 | + | 0.673684 |
| NA | Tbd_0463 | 4-hydroxybenzoate polyprenyl transferase | chromosome | CDS | 486065 | 882 | - | 0.651927 |
| NA | Tbd_2555 | phosphomethylpyrimidine kinase | chromosome | CDS | 2629717 | 843 | + | 0.682088 |
| NA | Tbd_2228 | anthranilate synthase component I | chromosome | CDS | 2307504 | 1566 | - | 0.671137 |
| NA | Tbd_2184 | 6-pyruvoyl tetrahydrobiopterin synthase | chromosome | CDS | 2266794 | 450 | - | 0.686667 |
| NA | Tbd_2163 | putative ubiquinone biosynthesis monooxygenase Coq7 | chromosome | CDS | 2248368 | 624 | - | 0.671474 |
| NA | Tbd_1991 | acetolactate synthase, large subunit | chromosome | CDS | 2081145 | 1842 | - | 0.624321 |
| NA | Tbd_2521 | S-adenosylmethionine synthetase | chromosome | CDS | 2592793 | 1167 | - | 0.655527 |
| NA | Tbd_0464 | chorismate:pyruvate lyase, 4-hydroxybenzoate synthetase | chromosome | CDS | 486943 | 564 | - | 0.707447 |
| NA | Tbd_2473 | Cobyrinic acid a,c-diamide synthase CbiA | chromosome | CDS | 2548653 | 1422 | - | 0.68706 |
| NA | Tbd_1911 | folylpolyglutamate synthetase | chromosome | CDS | 2006768 | 1269 | - | 0.699764 |
| NA | Tbd_2713 | adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase | chromosome | CDS | 2793843 | 519 | - | 0.726397 |
| NA | Tbd_1261 | conserved hypothetical protein | chromosome | CDS | 1323010 | 849 | + | 0.713781 |
| NA | Tbd_2134 | branched-chain amino acid aminotransferase I | chromosome | CDS | 2220861 | 924 | + | 0.635281 |
| NA | Tbd_0669 | glycine C-acetyltransferase | chromosome | CDS | 709675 | 1341 | - | 0.632364 |
| NA | Tbd_0526 | phenylacrylic acid decarboxylase | chromosome | CDS | 553500 | 618 | - | 0.671521 |
| NA | Tbd_2568 | porphobilinogen deaminase | chromosome | CDS | 2642187 | 921 | - | 0.686211 |
| NA | Tbd_0996 | hypothetical protein | chromosome | CDS | 1063289 | 855 | - | 0.665497 |
| NA | Tbd_2096 | L-aspartate oxidase | chromosome | CDS | 2186900 | 1626 | + | 0.672202 |
| NA | Tbd_2758 | methyltransferase | chromosome | CDS | 2837287 | 771 | - | 0.719844 |
| NA | Tbd_1948 | putative flavodoxin reductase | chromosome | CDS | 2042950 | 666 | - | 0.65015 |
| NA | Tbd_1989 | acetohydroxy acid isomeroreductase | chromosome | CDS | 2079592 | 1017 | - | 0.642085 |
| NA | Tbd_0080 | hypothetical protein | chromosome | CDS | 83013 | 354 | - | 0.672316 |
| NA | Tbd_2143 | molybdopterin binding domain | chromosome | CDS | 2228852 | 555 | + | 0.679279 |
| NA | Tbd_2519 | S-adenosyl-L-homocysteine hydrolase | chromosome | CDS | 2590133 | 1545 | - | 0.633657 |
| NA | Tbd_2409 | glutathione synthetase | chromosome | CDS | 2480897 | 945 | + | 0.685714 |
| NA | Tbd_0269 | Lipoate-protein ligase B | chromosome | CDS | 289858 | 657 | + | 0.695586 |
| NA | Tbd_2642 | conserved hypothetical protein | chromosome | CDS | 2718691 | 270 | - | 0.674074 |
| NA | Tbd_2168 | Riboflavin biosynthesis protein RibD diaminohydroxyphosphoribosylaminopyrimid ine deaminase + 5-amino-6-(5-phosphoribosylamino)uracil reductase oxidor | chromosome | CDS | 2252976 | 1080 | + | 0.732407 |
| NA | Tbd_2411 | putative thaimine biosynthesis protein | chromosome | CDS | 2482279 | 1089 | + | 0.705234 |
| NA | Tbd_2779 | uroporphyrinogen decarboxylase HemE | chromosome | CDS | 2858747 | 1071 | + | 0.686275 |
| NA | Tbd_1024 | molybdopterin-guanine dinucleotide biosynthesis MobB | chromosome | CDS | 1092278 | 501 | + | 0.652695 |
| NA | Tbd_1025 | molybdopterin binding domain | chromosome | CDS | 1092753 | 1194 | + | 0.706868 |
| NA | Tbd_2694 | Thiamine biosynthesis protein ThiC | chromosome | CDS | 2775118 | 1959 | - | 0.643185 |
| NA | Tbd_2556 | thiamine monophosphate synthase | chromosome | CDS | 2630560 | 636 | + | 0.721698 |
| NA | Tbd_2332 | ubiquinone biosynthesis hydroxylase | chromosome | CDS | 2405466 | 1158 | - | 0.711572 |
| NA | Tbd_2127 | thiamine-biosynthesis protein ThiS | chromosome | CDS | 2214691 | 204 | - | 0.676471 |
| NA | Tbd_1134 | dihydropteroate synthase | chromosome | CDS | 1189567 | 846 | + | 0.699764 |
| NA | Tbd_0635 | oxygen-independent coproporphyrinogen III oxidase HemN | chromosome | CDS | 673709 | 1371 | + | 0.658643 |
| NA | Tbd_2190 | 3,4-Dihydroxy-2-butanone 4-phosphate synthase | chromosome | CDS | 2272077 | 1086 | + | 0.675875 |
| NA | Tbd_2712 | nicotinate-nucleotide-dimethylbenzimidazolephosphoribosyltransferase | chromosome | CDS | 2792800 | 1047 | - | 0.743075 |
| NA | Tbd_2563 | NAD(P)H-flavin reductase | chromosome | CDS | 2637542 | 1038 | + | 0.646435 |
| NA | Tbd_1876 | acetolactate synthase | chromosome | CDS | 1972718 | 1764 | - | 0.550454 |
| NA | Tbd_0319 | biotin synthase | chromosome | CDS | 342970 | 954 | + | 0.678197 |
| NA | Tbd_1023 | Elongator protein 3/MiaB/NifB | chromosome | CDS | 1091225 | 984 | - | 0.673781 |
| NA | Tbd_2333 | ubiquinone biosynthesis hydroxylase | chromosome | CDS | 2406620 | 1137 | - | 0.729991 |
| NA | Tbd_2191 | 6,7-dimethyl-8-ribityllumazine synthase | chromosome | CDS | 2273180 | 468 | + | 0.653846 |
| NA | Tbd_0221 | quinolinate synthetase A | chromosome | CDS | 244278 | 1032 | - | 0.664729 |
| NA | Tbd_1453 | glutathione synthase/ribosomal protein S6 modification enzyme (glutaminyl transferase) | chromosome | CDS | 1536238 | 1473 | + | 0.675492 |
| NA | Tbd_0323 | dethiobiotin synthase | chromosome | CDS | 346724 | 684 | + | 0.703216 |
| NA | Tbd_2471 | uroporphyrin-III C-methyltransferase | chromosome | CDS | 2546872 | 1440 | - | 0.691667 |
| NA | Tbd_0295 | possible capK protein | chromosome | CDS | 315288 | 1386 | + | 0.720058 |
| NA | Tbd_0662 | acetolactate synthase large subunit | chromosome | CDS | 702339 | 1662 | - | 0.670878 |
| NA | Tbd_0274 | lipoate synthase | chromosome | CDS | 293125 | 936 | + | 0.679487 |
| NA | Tbd_0522 | HesA/MoeB/ThiF family protein | chromosome | CDS | 550735 | 804 | + | 0.699005 |
| NA | Tbd_2557 | glutamate-1-semialdehyde-2,1-aminomutase | chromosome | CDS | 2631203 | 1278 | + | 0.681534 |
| NA | Tbd_2033 | ferrochelatase | chromosome | CDS | 2124162 | 1104 | + | 0.682065 |
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