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2024-05-02 22:12:33

Gene list

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COG category: Coenzyme transport and metabolism
Organism: Shigella sonnei Ss046, Ss046

Number of genes found: 146

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Shigella sonnei Ss046, Ss046
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SSO_1489 conserved hypothetical proteinchromosome CDS1564972 306 - 0.447712
NA SSO_2464 putative enzymechromosome CDS2603424 1695 - 0.466077
NA SSO_1571 conserved hypothetical proteinchromosome CDS1650912 708 + 0.522599
apbA SSO_0402 ApbAchromosome CDS428573 912 - 0.519737
bioA SSO_0753 7,8-diaminopelargonic acid synthetasechromosome CDS797054 1290 - 0.562016
bioB SSO_0754 biotin synthesischromosome CDS798430 1041 + 0.551393
bioD SSO_0757 dethiobiotin synthetasechromosome CDS801356 678 + 0.536873
bioF SSO_0755 8-amino-7-oxononanoate synthasechromosome CDS799467 1155 + 0.585281
birA SSO_4146 biotin-[acetylCoA carboxylase] holoenzyme synthetase and biotin operon repressorchromosome CDS4392213 966 + 0.496894
btuB SSO_4139 outer membrane receptor for transport of vitamin B12, E colicins, and bacteriophage BF23chromosome CDS4383024 1845 + 0.501355
btuC SSO_1447 vitamin B12 transport permease proteinchromosome CDS1521504 981 + 0.552497
btuD SSO_1449 ATP-binding component of vitamin B12 transport systemchromosome CDS1523098 750 + 0.544
btuR SSO_1873 cob(I)alamin adenolsyltransferasechromosome CDS1971955 591 + 0.509306
citG SSO_0565 conserved hypothetical proteinchromosome CDS605634 879 - 0.546075
coaA SSO_4147 pantothenate kinasechromosome CDS4393207 951 - 0.443743
cobS SSO_2053 cobalamin 5'-phosphate synthasechromosome CDS2152482 744 - 0.532258
cobT SSO_2052 nicotinate-nucleotide dimethylbenzimidazole-P phophoribosyl transferasechromosome CDS2151391 1080 - 0.524074
cobU SSO_2054 cobinamide kinase/cobinamide phosphate guanylyltransferasechromosome CDS2153222 546 - 0.509158
cysD SSO_2900 ATP-sulfurylase subunit 2chromosome CDS3039065 909 - 0.533553
cysG SSO_3499 uroporphyrinogen III methylase; sirohaeme biosynthesischromosome CDS3659827 1374 + 0.54294
cysH SSO_2915 3'-phosphoadenosine 5'-phosphosulfate reductasechromosome CDS3053416 735 - 0.502041
dfp SSO_3767 flavoprotein affecting synthesis of DNA and pantothenate metabolismchromosome CDS3953154 1293 - 0.530549
dxs SSO_0397 1-deoxyxylulose-5-phosphate synthase; flavoproteinchromosome CDS423284 1863 - 0.543747
entC SSO_0544 isochorismate hydroxymutase 2chromosome CDS584416 1176 + 0.562925
fecE SSO_4459 ATP-binding component of citrate-dependent iron(III) transport proteinchromosome CDS4730804 768 - 0.53776
fepC SSO_0539 ATP-binding component of ferric enterobactin transportchromosome CDS578829 816 - 0.536765
fhuC SSO_0163 ATP-binding component of hydroxymate-dependent iron transportchromosome CDS183921 798 + 0.562657
folA SSO_0056 dihydrofolate reductase type Ichromosome CDS59159 480 + 0.53125
folC SSO_2373 dihydrofolate:folylpolyglutamate synthetasechromosome CDS2503442 1269 - 0.55792
folD SSO_0489 5,10-methylene-tetrahydrofolate dehydrogenasechromosome CDS519544 867 + 0.546713
folE SSO_2209 GTP cyclohydrolase Ichromosome CDS2315802 669 - 0.505232
folK SSO_0154 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokin asechromosome CDS171450 480 - 0.516667
folP SSO_3325 7,8-dihydropteroate synthasechromosome CDS3503136 894 - 0.512304
folX SSO_2360 D-erythro-7,8-dihydroneopterin tri P epimerasechromosome CDS2492316 363 + 0.443526
gshA SSO_2832 gamma-glutamate-cysteine ligasechromosome CDS2976107 1557 - 0.512524
gshB SSO_3101 glutathione synthetasechromosome CDS3263604 951 + 0.534175
hemA SSO_1968 enzyme in alternate path of synthesis of 5-aminolevulinatechromosome CDS2069786 1257 - 0.539379
hemB SSO_0347 5-aminolevulinate dehydratasechromosome CDS372834 1008 - 0.536706
hemC SSO_3977 porphobilinogen deaminasechromosome CDS4198963 963 - 0.554517
hemD SSO_3976 uroporphyrinogen III synthasechromosome CDS4198226 741 - 0.530364
hemE SSO_4170 uroporphyrinogen decarboxylasechromosome CDS4415928 1065 + 0.558685
hemF SSO_2525 coproporphyrinogen III oxidasechromosome CDS2661981 900 + 0.547778
hemG SSO_4023 protoporphyrin oxidasechromosome CDS4251862 546 + 0.507326
hemH SSO_0462 ferrochelatasechromosome CDS490139 963 + 0.544133
hemL SSO_0166 glutamate-1-semialdehyde aminotransferase (aminomutase)chromosome CDS187745 1281 - 0.555816
hemN SSO_4039 O2-independent coproporphyrinogen III oxidasechromosome CDS4268979 1380 + 0.531159
hemX SSO_3975 uroporphyrinogen III methylasechromosome CDS4196987 1218 - 0.541872
hemY SSO_3974 HemYchromosome CDS4195788 1197 - 0.544695
ilvB SSO_3625 valine-sensitive acetolactate synthase large subunitchromosome CDS3794112 1689 - 0.558911
ilvC SSO_3945 ketol-acid reductoisomerasechromosome CDS4167325 1476 + 0.544715
ilvE SSO_3941 branched-chain amino-acid aminotransferasechromosome CDS4161839 930 + 0.548387
ilvG SSO_3939 Acetolactate synthase II, large subunitchromosome CDS4159913 1647 + 0.544019
ilvI SSO_0084 acetolactate synthase isozyme III large subunitchromosome CDS94190 1725 + 0.527536
ispA SSO_0398 geranyltranstransferasechromosome CDS425171 900 - 0.542222
ispB SSO_3335 octaprenyl diphosphate synthasechromosome CDS3512783 972 + 0.524691
kbl SSO_3787 2-amino-3-ketobutyrate CoA ligasechromosome CDS3972135 1197 + 0.542189
kdtB SSO_3773 putative enzyme of lipopolysaccharide synthesischromosome CDS3957578 480 - 0.529167
ldhA SSO_1744 fermentative D-lactate dehydrogenase, NAD-dependentchromosome CDS1849006 990 + 0.50404
lipA SSO_0582 LipAchromosome CDS620533 966 - 0.533126
lipB SSO_0584 protein of lipoate biosynthesischromosome CDS622920 576 - 0.473958
lplA SSO_4536 lipoate-protein ligase Achromosome CDS4806768 1017 - 0.576205
menA SSO_4099 1,4-dihydroxy-2-naphthoate octaprenyltransferasechromosome CDS4333463 927 - 0.533981
menB SSO_2323 dihydroxynaphtoic acid synthetasechromosome CDS2451797 858 - 0.548951
menC SSO_2322 O-succinylbenzoyl-CoA synthasechromosome CDS2450835 963 - 0.58567
menD SSO_2325 2-oxoglutarate decarboxylasechromosome CDS2453424 1671 - 0.582884
menF SSO_2326 isochorismate hydroxymutase 2chromosome CDS2455183 1071 - 0.542484
menG SSO_4098 MenGchromosome CDS4332885 486 - 0.516461
metK SSO_3096 methionine adenosyltransferase 1 (AdoMet synthetase); methyl and propylamine donor, corepressor of met geneschromosome CDS3258417 1155 + 0.532468
mhpA SSO_0297 3-(3-hydroxyphenyl)propionate hydroxylasechromosome CDS324220 1665 - 0.568168
moaA SSO_0760 molybdopterin biosynthesis, protein Achromosome CDS806130 990 + 0.539394
moaB SSO_0761 molybdopterin biosynthesis, protein Bchromosome CDS807141 513 + 0.524366
moaC SSO_0762 molybdopterin biosynthesis, protein Cchromosome CDS807656 486 + 0.561728
moaD SSO_0763 molybdopterin biosynthesischromosome CDS808134 246 + 0.569106
moaE SSO_0764 molybdopterin converting factor, subunit 2chromosome CDS808381 453 + 0.573951
mobA SSO_4029 molybdopterin-guanine dinucleotide biosynthesis protein Archromosome CDS4258407 585 - 0.499145
mobB SSO_4028 molybdopterin-guanine dinucleotide biosynthesis protein Bchromosome CDS4257898 513 - 0.48538
moeA SSO_0809 molybdopterin biosynthesischromosome CDS860382 1236 - 0.566343
moeB SSO_0808 molybdopterin biosynthesischromosome CDS859633 750 - 0.557333
mog SSO_0010 required for the efficient incorporation of molybdate into molybdoproteinschromosome CDS10082 588 + 0.537415
nadC SSO_0117 quinolinate phosphoribosyltransferasechromosome CDS126980 894 - 0.533557
nadE SSO_1418 NAD synthetasechromosome CDS1492584 828 - 0.492754
nadR SSO_4540 probable nadAB transcriptional regulatorchromosome CDS4810961 1254 + 0.504785
ospB SSO_P003 OspBpSS_046 CDS1176 867 + 0.32872
pabA SSO_3491 p-aminobenzoate synthetase, component IIchromosome CDS3652265 564 - 0.537234
pabB SSO_1348 p-aminobenzoate synthetase, component Ichromosome CDS1423168 1362 - 0.504405
pabC SSO_1116 4-amino-4-deoxychorismate lyasechromosome CDS1194591 810 + 0.504938
panB SSO_0142 3-methyl-2-oxobutanoate hydroxymethyltransferasechromosome CDS157995 795 - 0.54717
panC SSO_0141 pantothenate synthetasechromosome CDS157132 852 - 0.530516
panD SSO_0139 aspartate 1-decarboxylasechromosome CDS155290 381 - 0.524934
panF SSO_3399 sodium/pantothenate symporterchromosome CDS3580388 1458 + 0.544582
pdxA SSO_0060 pyridoxine biosynthesischromosome CDS61763 990 - 0.563636
pdxB SSO_2378 erythronate-4-phosphate dehyrogenasechromosome CDS2508483 1137 - 0.528584
pdxH SSO_1518 pyridoxinephosphate oxidasechromosome CDS1593907 657 + 0.517504
pdxJ SSO_2688 pyridoxine biosynthesischromosome CDS2846063 732 - 0.553279
pdxK SSO_2508 pyridoxal/pyridoxine/pyridoxamine kinasechromosome CDS2646416 852 - 0.518779
pdxY SSO_1520 pyridoxal kinase 2/pyridoxine kinasechromosome CDS1596025 864 + 0.528935
pncB SSO_0934 nicotinate phosphoribosyltransferasechromosome CDS1006301 1203 - 0.512884
pnuC SSO_0703 required for NMN transportchromosome CDS745182 720 + 0.480556
poxB SSO_0857 pyruvate oxidasechromosome CDS908612 1719 - 0.541012
ribA SSO_1863 GTP cyclohydrolase IIchromosome CDS1960376 591 + 0.497462
ribB SSO_3178 3,4 dihydroxy-2-butanone-4-phosphate synthasechromosome CDS3337321 654 - 0.527523
ribD SSO_0391 bifunctional pyrimidine deaminase/reductase in pathway of riboflavin synthesischromosome CDS418549 1104 + 0.558877
ribE SSO_1494 riboflavin synthase, alpha chainchromosome CDS1568735 642 + 0.475078
ribF SSO_0030 putative regulatorchromosome CDS28573 942 + 0.531847
ribH SSO_0392 riboflavin synthase, beta chainchromosome CDS419741 471 + 0.522293
rimK SSO_0837 ribosomal protein S6 modification proteinchromosome CDS888767 903 + 0.560354
serA SSO_3065 D-3-phosphoglycerate dehydrogenasechromosome CDS3227372 1233 - 0.527981
serC SSO_0908 3-phosphoserine aminotransferasechromosome CDS971922 1089 + 0.504132
tbpA SSO_0074 thiamin-binding periplasmic proteinchromosome CDS82281 984 - 0.529472
thiC SSO_4167 ThiCchromosome CDS4412415 1896 - 0.557489
thiD SSO_2151 phosphomethylpyrimidine kinasechromosome CDS2255413 801 - 0.549313
thiE SSO_4166 ThiEchromosome CDS4411780 636 - 0.580189
thiF SSO_4165 ThiFchromosome CDS4411032 738 - 0.571816
thiG SSO_4163 ThiGchromosome CDS4410076 846 - 0.57565
thiH SSO_4162 ThiHchromosome CDS4408946 1134 - 0.549383
thiL SSO_0394 thiamin-monophosphate kinasechromosome CDS420728 978 + 0.543967
thiM SSO_2152 hydoxyethylthiazole kinasechromosome CDS2256210 789 - 0.547529
thiS SSO_4164 Sulfur transfer proteinchromosome CDS4410848 201 - 0.552239
trbH SSO_P191 conserved hypothetical proteinpSS_046 CDS168626 720 + 0.501389
trpD SSO_1880 anthranilate synthase component IIchromosome CDS1978146 1596 + 0.560777
trpE SSO_1879 anthranilate synthase component Ichromosome CDS1976584 1563 + 0.547665
ubiA SSO_4220 4-hydroxybenzoate-octaprenyltransferasechromosome CDS4477439 873 + 0.514318
ubiB SSO_4017 ferrisiderophore reductasechromosome CDS4243972 702 + 0.518519
ubiC SSO_4219 chorismate lyasechromosome CDS4476818 609 + 0.502463
ubiE SSO_4008 ubiquinone/menaquinone biosynthesis methyltransferasechromosome CDS4236299 756 + 0.519841
ubiG SSO_2290 3-demethylubiquinone-9 3-methyltransferase and 2-octaprenyl-6-hydroxy phenol methylasechromosome CDS2411744 723 + 0.543568
ubiH SSO_3060 2-octaprenyl-6-methoxyphenol hydroxylasechromosome CDS3222144 1179 - 0.601357
ubiX SSO_2369 3-octaprenyl-4-hydroxybenzoate carboxy-lyasechromosome CDS2499825 570 - 0.529825
visC SSO_3059 conserved hypothetical proteinchromosome CDS3220919 1203 - 0.546966
yabJ SSO_0072 putative ATP-binding component of a transport systemchromosome CDS80013 699 - 0.573677
yacE SSO_0111 putative DNA repair proteinchromosome CDS121826 621 - 0.52818
ybdU SSO_0566 conserved hypothetical proteinchromosome CDS606487 552 - 0.586957
ybeN SSO_0593 conserved hypothetical proteinchromosome CDS631214 642 - 0.501558
ycdW SSO_1042 putative dehydrogenasechromosome CDS1125477 978 + 0.510225
ygcM SSO_2918 putative 6-pyruvoyl tetrahydrobiopterin synthasechromosome CDS3058052 366 + 0.494536
ygdL SSO_2969 putative enzymechromosome CDS3114812 807 - 0.550186
ygfA SSO_3064 putative ligasechromosome CDS3226045 549 + 0.520947
yggC SSO_3085 putative kinasechromosome CDS3248082 714 - 0.540616
yggW SSO_3109 putative oxidasechromosome CDS3268984 1137 + 0.531223
ygiG SSO_3195 putative kinasechromosome CDS3358452 372 - 0.505376
yhhU SSO_3713 conserved hypothetical proteinchromosome CDS3890238 588 + 0.569728
yiaE SSO_3835 putative dehydrogenasechromosome CDS4027718 987 - 0.515704
yieE SSO_3556 conserved hypothetical proteinchromosome CDS3724656 762 + 0.520997
yigC SSO_4016 putative oxidoreductasechromosome CDS4242432 1494 + 0.539491
yleB SSO_0616 conserved hypothetical proteinchromosome CDS657206 1176 + 0.564626
yojL SSO_2272 conserved hypothetical proteinchromosome CDS2384673 1056 - 0.530303