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2024-05-05 21:18:47

Gene list

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COG category: Coenzyme transport and metabolism
Organism: Shigella boydii Sb227, Sb227

Number of genes found: 143

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Shigella boydii Sb227, Sb227
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SBO_1543 conserved hypothetical proteinchromosome CDS1524949 708 + 0.519774
NA SBO_2700 putative phosphoglycerate dehydrogenasechromosome CDS2704227 948 - 0.436709
NA SBO_4250 conserved hypothetical proteinchromosome CDS4305828 558 + 0.430108
NA SBO_3736 hypothetical proteinchromosome CDS3752653 543 - 0.510129
NA SBO_2399 putative enzymechromosome CDS2392188 1695 - 0.464307
NA SBO_1465 conserved hypothetical proteinchromosome CDS1442068 306 - 0.447712
apbA SBO_0319 ApbAchromosome CDS332450 912 - 0.517544
bioA SBO_0661 7,8-diaminopelargonic acid synthetasechromosome CDS673990 1290 - 0.560465
bioB SBO_0662 biotin synthesischromosome CDS675366 1041 + 0.552354
bioD SBO_0665 dethiobiotin synthetasechromosome CDS678292 678 + 0.535398
bioF SBO_0663 8-amino-7-oxononanoate synthasechromosome CDS676403 1155 + 0.584416
birA SBO_3993 biotin-[acetylCoA carboxylase] holoenzyme synthetasechromosome CDS4031504 966 + 0.496894
btuC SBO_1417 vitamin B12 transport permease proteinchromosome CDS1393139 981 + 0.547401
btuD SBO_1419 ATP-binding component of vitamin B12 transport systemchromosome CDS1394733 750 + 0.548
btuR SBO_1796 cob(I)alamin adenolsyltransferasechromosome CDS1775398 540 + 0.511111
citG SBO_0478 conserved hypothetical proteinchromosome CDS497102 849 - 0.558304
coaA SBO_3994 pantothenate kinasechromosome CDS4032498 951 - 0.443743
cobS SBO_1211 cobalamin 5'-phosphate synthasechromosome CDS1209534 744 + 0.530914
cobT SBO_1212 nicotinate-nucleotide dimethylbenzimidazole-P phophoribosyl transferasechromosome CDS1210343 1026 + 0.526316
cysD SBO_2768 ATP:sulfurylase, subunit 2chromosome CDS2776950 909 + 0.531353
cysG SBO_3350 uroporphyrinogen III methylasechromosome CDS3336573 1374 + 0.54294
cysH SBO_2645 3'-phosphoadenosine 5'-phosphosulfate reductasechromosome CDS2648095 735 - 0.503401
dfp SBO_3641 Dfpchromosome CDS3658257 1293 + 0.529002
dxs SBO_0314 1-deoxyxylulose-5-phosphate synthasechromosome CDS327161 1863 - 0.541063
entC SBO_0454 isochorismate hydroxymutase 2, enterochelin biosynthesischromosome CDS473362 1176 + 0.561224
fepC SBO_0449 ATP-binding component of ferric enterobactin transportchromosome CDS467861 816 - 0.535539
fhuC SBO_0140 ATP-binding component of hydroxymate-dependent iron transporterchromosome CDS155931 798 + 0.565163
folA SBO_0037 dihydrofolate reductase type Ichromosome CDS38885 480 + 0.533333
folC SBO_2352 dihydrofolate:folylpolyglutamate synthetasechromosome CDS2340569 1269 - 0.55792
folD SBO_0414 5,10-methylene-tetrahydrofolate dehydrogenasechromosome CDS430772 867 + 0.542099
folE SBO_2174 GTP cyclohydrolase Ichromosome CDS2151795 669 + 0.505232
folK SBO_0131 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokin asechromosome CDS143472 480 - 0.514583
folP SBO_3205 7,8-dihydropteroate synthasechromosome CDS3210035 894 + 0.514541
folX SBO_2338 D-erythro-7,8-dihydroneopterin tri P epimerasechromosome CDS2329443 363 + 0.443526
gshA SBO_2829 gamma-glutamate-cysteine ligasechromosome CDS2835296 1557 + 0.509955
gshB SBO_3043 glutathione synthetasechromosome CDS3040705 951 - 0.537329
hemA SBO_1857 HemAchromosome CDS1837689 1257 - 0.539379
hemB SBO_0263 5-aminolevulinate dehydratasechromosome CDS277044 1008 - 0.539683
hemC SBO_3816 porphobilinogen deaminasechromosome CDS3837784 963 - 0.555556
hemD SBO_3815 uroporphyrinogen III synthasechromosome CDS3837047 741 - 0.535762
hemE SBO_4018 uroporphyrinogen decarboxylasechromosome CDS4056140 1065 + 0.557746
hemF SBO_2461 coproporphyrinogen III oxidasechromosome CDS2451538 900 + 0.546667
hemG SBO_3862 protoporphyrin oxidasechromosome CDS3887883 546 + 0.509158
hemH SBO_0375 ferrochelatasechromosome CDS391201 963 + 0.539979
hemL SBO_0143 glutamate-1-semialdehyde aminotransferasechromosome CDS159632 1281 - 0.558938
hemN SBO_3879 O2-independent coproporphyrinogen III oxidasechromosome CDS3906399 1380 + 0.532609
hemX SBO_3814 uroporphyrinogen III methylasechromosome CDS3835802 1224 - 0.538399
hemY SBO_3813 HemYchromosome CDS3834603 1197 - 0.546366
ilvB SBO_3698 acetolactate synthase I valine-sensitive large subunitchromosome CDS3713277 1689 + 0.563647
ilvC SBO_3785 ketol-acid reductoisomerasechromosome CDS3806121 1476 + 0.547425
ilvE SBO_3781 branched-chain amino-acid aminotransferasechromosome CDS3800693 930 + 0.548387
ilvG SBO_3779 Acetolactate synthase II, large subunitchromosome CDS3798767 1647 + 0.542805
ilvI SBO_0065 acetolactate synthase isozyme III large subunitchromosome CDS73633 1725 + 0.525217
ispA SBO_0315 geranyltranstransferasechromosome CDS329048 900 - 0.542222
ispB SBO_3195 octaprenyl diphosphate synthasechromosome CDS3200456 972 - 0.527778
kbl SBO_3623 2-amino-3-ketobutyrate CoA ligasechromosome CDS3640140 1197 - 0.542189
kdtB SBO_3636 putative enzyme of lipopolysaccharide synthesischromosome CDS3655423 480 + 0.527083
ldhA SBO_1686 fermentative D-lactate dehydrogenase, NAD-dependentchromosome CDS1670039 990 + 0.50404
lipA SBO_0492 lipoate synthesischromosome CDS509661 966 - 0.532091
lipB SBO_0494 protein of lipoate biosynthesischromosome CDS512047 576 - 0.473958
lplA SBO_4449 lipoate-protein ligase Achromosome CDS4501326 1017 - 0.579154
menA SBO_3947 MenAchromosome CDS3972999 927 - 0.539374
menB SBO_2299 dihydroxynaphtoic acid synthetasechromosome CDS2288132 858 - 0.554779
menC SBO_2298 o-succinylbenzoyl-CoA synthasechromosome CDS2287170 963 - 0.589823
menD SBO_2301 2-oxoglutarate decarboxylasechromosome CDS2289759 1671 - 0.582286
menF SBO_2302 isochorismate hydroxymutase 2chromosome CDS2291518 1071 - 0.537815
menG SBO_3946 MenGchromosome CDS3972421 486 - 0.516461
metK SBO_3048 methionine adenosyltransferase 1chromosome CDS3045685 1155 - 0.531602
moaA SBO_0668 molybdopterin biosynthesis, protein Achromosome CDS683066 990 + 0.541414
moaB SBO_0669 molybdopterin biosynthesis, protein Bchromosome CDS684077 513 + 0.520468
moaC SBO_0670 molybdopterin biosynthesis, protein Cchromosome CDS684592 486 + 0.559671
moaD SBO_0671 molybdopterin biosynthesischromosome CDS685070 246 + 0.556911
moaE SBO_0672 molybdopterin converting factor, subunit 2chromosome CDS685317 453 + 0.565121
mobA SBO_3869 MobAchromosome CDS3894521 585 - 0.504274
mobB SBO_3868 molybdopterin-guanine dinucleotide biosynthesis protein Bchromosome CDS3894012 513 - 0.48538
moeA SBO_0717 molybdopterin biosynthesischromosome CDS734804 1236 - 0.565534
moeB SBO_0716 molybdopterin biosynthesischromosome CDS734055 750 - 0.556
mog SBO_0010 Mogchromosome CDS10081 588 + 0.535714
nadA SBO_0605 quinolinate synthetase, A proteinchromosome CDS625737 1044 + 0.501916
nadC SBO_0098 quinolinate phosphoribosyltransferasechromosome CDS106412 894 - 0.53132
nadE SBO_1350 NAD synthetasechromosome CDS1333516 828 - 0.5
nadR SBO_4453 probable nadAB transcriptional regulatorchromosome CDS4505519 1254 + 0.505582
pabA SBO_3342 p-aminobenzoate synthetase, component IIchromosome CDS3329010 564 - 0.535461
pabB SBO_1272 p-aminobenzoate synthetase, component Ichromosome CDS1263868 1362 - 0.511013
pabC SBO_1967 4-amino-4-deoxychorismate lyasechromosome CDS1941224 810 - 0.506173
panB SBO_0123 3-methyl-2-oxobutanoate hydroxymethyltransferasechromosome CDS137220 795 - 0.548428
panC SBO_0122 pantothenate synthetasechromosome CDS136357 852 - 0.530516
panD SBO_0120 aspartate 1-decarboxylasechromosome CDS134515 381 - 0.524934
panF SBO_3252 sodium/pantothenate symporterchromosome CDS3255834 1458 + 0.542524
pdxA SBO_0041 pyridoxine biosynthesischromosome CDS41489 990 - 0.564646
pdxB SBO_2357 erythronate-4-phosphate dehyrogenasechromosome CDS2345610 1137 - 0.527704
pdxH SBO_1496 pyridoxinephosphate oxidasechromosome CDS1472805 657 + 0.520548
pdxJ SBO_2592 pyridoxine biosynthesischromosome CDS2598076 732 - 0.554645
pdxY SBO_1498 pyridoxal kinase 2/pyridoxine kinasechromosome CDS1474923 864 + 0.532407
pncB SBO_2222 nicotinate phosphoribosyltransferasechromosome CDS2207322 1203 - 0.512884
pnuC SBO_0606 PnuCchromosome CDS626818 720 + 0.481944
poxB SBO_0804 pyruvate oxidasechromosome CDS812136 1719 - 0.539849
ribA SBO_1787 GTP cyclohydrolase IIchromosome CDS1763920 591 + 0.499154
ribB SBO_2899 3,4 dihydroxy-2-butanone-4-phosphate synthasechromosome CDS2901780 654 - 0.527523
ribD SBO_0308 bifunctional pyrimidine deaminase/reductase in pathway of riboflavin synthesischromosome CDS322426 1104 + 0.554348
ribE SBO_1469 riboflavin synthase, alpha chainchromosome CDS1445750 642 + 0.478193
ribF SBO_0024 putative regulatorchromosome CDS21499 942 + 0.530786
ribH SBO_0309 riboflavin synthase, beta chainchromosome CDS323618 471 + 0.52017
rimK SBO_0786 ribosomal protein S6 modification proteinchromosome CDS794796 903 + 0.55814
serA SBO_3080 D-3-phosphoglycerate dehydrogenasechromosome CDS3079673 1233 + 0.523925
serC SBO_2193 3-phosphoserine aminotransferasechromosome CDS2172162 1089 + 0.503214
tbpA SBO_0055 thiamin-binding periplasmic proteinchromosome CDS62081 984 - 0.529472
thiC SBO_4015 thiamin biosynthesis, pyrimidine moietychromosome CDS4052627 1896 - 0.555907
thiD SBO_0924 phosphomethylpyrimidine kinasechromosome CDS953912 801 - 0.55181
thiE SBO_4014 thiamin biosynthesis, thiazole moietychromosome CDS4051992 636 - 0.573899
thiG SBO_4011 thiamin biosynthesis, thiazole moietychromosome CDS4050288 846 - 0.574468
thiH SBO_4010 thiamin biosynthesis, thiazole moietychromosome CDS4049158 1134 - 0.548501
thiL SBO_0311 thiamin-monophosphate kinasechromosome CDS324605 978 + 0.547035
thiM SBO_0925 hydoxyethylthiazole kinasechromosome CDS954709 789 - 0.541191
thiS SBO_4012 Sulfur transfer proteinchromosome CDS4051060 201 - 0.547264
trpD SBO_1803 anthranilate synthase component IIchromosome CDS1782317 1596 + 0.556391
trpE SBO_1802 anthranilate synthase component Ichromosome CDS1780755 1563 + 0.550224
ubiA SBO_4077 4-hydroxybenzoate-octaprenyltransferasechromosome CDS4119771 873 - 0.512028
ubiB SBO_3856 ferrisiderophore reductasechromosome CDS3879963 702 + 0.519943
ubiC SBO_4078 chorismate lyasechromosome CDS4120656 609 - 0.502463
ubiE SBO_3847 UbiEchromosome CDS3872291 756 + 0.519841
ubiG SBO_2064 3-demethylubiquinone-9 3-methyltransferase/2-octaprenyl-6-hydroxy phenol methylasechromosome CDS2039213 723 - 0.539419
ubiH SBO_3085 UbiHchromosome CDS3084957 1179 + 0.601357
ubiX SBO_2348 3-octaprenyl-4-hydroxybenzoate carboxy-lyasechromosome CDS2336952 570 - 0.52807
visC SBO_3086 conserved hypothetical proteinchromosome CDS3086158 1203 + 0.546135
yabJ SBO_0053 putative ATP-binding component of a transport systemchromosome CDS59813 699 - 0.573677
yacE SBO_0091 putative DNA repair proteinchromosome CDS100493 621 - 0.52818
ybdU SBO_0479 conserved hypothetical proteinchromosome CDS497987 489 - 0.591002
ybeN SBO_0503 conserved hypothetical proteinchromosome CDS520342 642 - 0.498442
ycdW SBO_2035 putative dehydrogenasechromosome CDS2001861 978 - 0.509202
ydaH SBO_1725 putative pump protein (transport)chromosome CDS1707900 1437 + 0.493389
ygcM SBO_2649 putative 6-pyruvoyl tetrahydrobiopterin synthasechromosome CDS2653983 366 + 0.486339
ygdL SBO_2695 putative enzymechromosome CDS2701664 807 - 0.550186
ygfA SBO_3081 putative ligasechromosome CDS3081686 549 - 0.517304
yggC SBO_3060 putative kinasechromosome CDS3058855 714 + 0.535014
yggW SBO_3035 putative oxidasechromosome CDS3035138 1137 - 0.528584
ygiG SBO_2914 putative kinasechromosome CDS2918844 372 - 0.508065
yhhU SBO_3472 conserved hypothetical proteinchromosome CDS3462346 588 + 0.569728
yiaE SBO_3555 putative dehydrogenasechromosome CDS3564172 987 + 0.522796
yieE SBO_3663 conserved hypothetical proteinchromosome CDS3678527 762 - 0.520997
yigC SBO_3855 putative oxidoreductasechromosome CDS3878424 1494 + 0.538153
yleB SBO_0526 conserved hypothetical proteinchromosome CDS545982 1176 + 0.563776
yojL SBO_2093 conserved hypothetical proteinchromosome CDS2074086 1056 + 0.534091