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2024-04-30 09:55:56

Gene list

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COG category: Coenzyme transport and metabolism
Organism: Shigella dysenteriae Sd197, Sd197

Number of genes found: 145

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Shigella dysenteriae Sd197, Sd197
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SDY_2571 putative enzymechromosome CDS2367486 1695 - 0.467847
NA SDY_1563 conserved hypothetical proteinchromosome CDS1430437 708 + 0.516949
NA SDY_2937 conserved hypothetical proteinchromosome CDS2716981 1245 - 0.575904
NA SDY_2938 phenylacrylic acid decarboxylase-like proteinchromosome CDS2718407 594 - 0.574074
NA SDY_1240 putative iron compound ABC transporter, ATP-binding proteinchromosome CDS1146102 759 - 0.537549
apbA SDY_0305 ApbAchromosome CDS297219 912 + 0.509868
bioA SDY_0832 7,8-diaminopelargonic acid synthetasechromosome CDS776492 1290 + 0.565891
bioB SDY_0831 biotin synthesischromosome CDS775364 1041 - 0.54755
bioD SDY_0828 dethiobiotin synthetasechromosome CDS772801 678 - 0.541298
bioF SDY_0830 8-amino-7-oxononanoate synthasechromosome CDS774213 1155 - 0.581818
btuB SDY_3762 outer membrane receptor for transport of vitamin B12, E colicins, and bacteriophage BF23chromosome CDS3492923 1845 - 0.498645
btuC SDY_1806 vitamin B12 transport permease proteinchromosome CDS1643240 981 - 0.547401
btuD SDY_1804 ATP-binding component of vitamin B12 transport systemchromosome CDS1641877 750 - 0.553333
btuR SDY_1340 cob(I)alamin adenolsyltransferasechromosome CDS1238316 591 - 0.51269
coaA SDY_3754 pantothenate kinasechromosome CDS3483642 951 + 0.44164
cobS SDY_2241 cobalamin 5'-phosphate synthasechromosome CDS2042314 744 + 0.526882
cobT SDY_2242 nicotinate-nucleotide dimethylbenzimidazole-P phophoribosyl transferasechromosome CDS2043069 1080 + 0.519444
cobU SDY_2240 cobinamide kinase/cobinamide phosphate guanylyltransferasechromosome CDS2041772 546 + 0.510989
cysD SDY_2951 ATP-sulfurylase, subunit 2chromosome CDS2728536 909 - 0.532453
cysG SDY_3530 uroporphyrinogen III methylasechromosome CDS3264870 1374 + 0.538574
cysH SDY_2964 3'-phosphoadenosine 5'-phosphosulfate reductasechromosome CDS2737233 735 - 0.510204
dfp SDY_4069 Dfpchromosome CDS3804928 1293 + 0.526682
dxs SDY_0310 1-deoxyxylulose-5-phosphate synthasechromosome CDS301557 1863 + 0.536769
entC SDY_0524 isochorismate hydroxymutase 2chromosome CDS510093 1176 + 0.562075
fecE SDY_4293 ATP-binding component of citrate-dependent iron(III) transport proteinchromosome CDS4022300 768 - 0.540365
fepC SDY_0519 ATP-binding component of ferric enterobactin transportchromosome CDS504692 816 - 0.544118
fhuC SDY_0167 ATP-binding component of hydroxymate-dependent iron transportchromosome CDS170107 798 + 0.567669
folA SDY_0071 dihydrofolate reductase type Ichromosome CDS68384 480 + 0.527083
folC SDY_2514 dihydrofolate:folylpolyglutamate synthetasechromosome CDS2312361 1269 - 0.55792
folD SDY_0281 5,10-methylene-tetrahydrofolate dehydrogenasechromosome CDS274853 867 - 0.543253
folE SDY_2127 GTP cyclohydrolase Ichromosome CDS1928844 669 + 0.508221
folK SDY_0158 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokin asechromosome CDS157582 480 - 0.489583
folP SDY_3358 7,8-dihydropteroate synthasechromosome CDS3115468 894 - 0.510067
folX SDY_2500 D-erythro-7,8-dihydroneopterin tri P epimerasechromosome CDS2301075 363 + 0.449036
gshA SDY_2885 gamma-glutamate-cysteine ligasechromosome CDS2668931 1557 - 0.518947
gshB SDY_3125 glutathione synthetasechromosome CDS2896845 951 - 0.53102
hemA SDY_1259 5-aminolevulinate synthesis enzyme, alternate pathwaychromosome CDS1165805 1257 + 0.540175
hemB SDY_0501 5-aminolevulinate dehydratasechromosome CDS485847 1008 + 0.536706
hemC SDY_3941 porphobilinogen deaminasechromosome CDS3671675 963 + 0.557632
hemD SDY_3942 uroporphyrinogen III synthasechromosome CDS3672634 741 + 0.533063
hemE SDY_3729 uroporphyrinogen decarboxylasechromosome CDS3459124 1065 - 0.557746
hemF SDY_2634 coproporphyrinogen III oxidasechromosome CDS2426317 900 + 0.548889
hemG SDY_3895 protoporphyrin oxidasechromosome CDS3625309 546 - 0.521978
hemH SDY_0444 ferrochelatasechromosome CDS434602 963 - 0.537902
hemL SDY_0170 glutamate-1-semialdehyde aminotransferasechromosome CDS173808 1281 - 0.554254
hemN SDY_3876 O2-independent coproporphyrinogen III oxidasechromosome CDS3605680 1380 - 0.52971
hemX SDY_3943 uroporphyrinogen III methylasechromosome CDS3673396 1182 + 0.532995
hemY SDY_3944 a late step of protoheme IX synthesischromosome CDS3674580 1197 + 0.548872
ilvB SDY_4155 acetolactate synthase I,valine-sensitive, large subunitchromosome CDS3888897 1689 - 0.560095
ilvC SDY_3974 ketol-acid reductoisomerasechromosome CDS3705002 1476 - 0.536585
ilvE SDY_3978 branched-chain amino-acid aminotransferasechromosome CDS3710976 930 - 0.545161
ilvG SDY_3980 Acetolactate synthase II, large subunitchromosome CDS3712185 1647 - 0.544627
ilvI SDY_0107 acetolactate synthase isozyme III large subunitchromosome CDS106283 1725 + 0.525797
ispA SDY_0309 geranyltranstransferasechromosome CDS300633 900 + 0.543333
ispB SDY_3368 octaprenyl diphosphate synthasechromosome CDS3124968 972 + 0.526749
kbl SDY_4050 2-amino-3-ketobutyrate CoA ligasechromosome CDS3787125 1197 - 0.539683
kdtB SDY_4064 putative enzyme of LPS biosynthesischromosome CDS3802094 480 + 0.51875
ldhA SDY_1464 fermentative D-lactate dehydrogenase, NAD-dependentchromosome CDS1345935 990 - 0.49596
lipA SDY_0550 lipoate synthesischromosome CDS531917 966 - 0.535197
lipB SDY_0552 protein of lipoate biosynthesischromosome CDS534439 576 - 0.473958
lplA SDY_4647 lipoate-protein ligase Achromosome CDS4350787 1017 - 0.571288
menA SDY_3807 MenAchromosome CDS3546405 927 + 0.537217
menB SDY_2458 dihydroxynaphtoic acid synthetasechromosome CDS2258906 858 - 0.552448
menC SDY_2457 o-succinylbenzoyl-CoA synthasechromosome CDS2257944 963 - 0.595016
menD SDY_2460 2-oxoglutarate decarboxylasechromosome CDS2260533 1671 - 0.582286
menF SDY_2461 isochorismate hydroxymutase 2, menaquinone biosynthesischromosome CDS2262292 1071 - 0.533147
menG SDY_3808 menaquinone biosynthesis proteinchromosome CDS3547424 486 + 0.516461
metK SDY_3130 methionine adenosyltransferase 1chromosome CDS2901826 1155 - 0.52987
moaA SDY_0825 molybdopterin biosynthesis, protein Achromosome CDS767716 990 - 0.537374
moaB SDY_0824 molybdopterin biosynthesis, protein Bchromosome CDS767182 513 - 0.522417
moaC SDY_0823 molybdopterin biosynthesis, protein Cchromosome CDS766694 486 - 0.561728
moaD SDY_0822 molybdopterin biosynthesischromosome CDS766456 246 - 0.565041
moaE SDY_0821 molybdopterin converting factor, subunit 2chromosome CDS766002 453 - 0.565121
mobA SDY_3888 MobAchromosome CDS3618646 585 + 0.505983
mobB SDY_3889 molybdopterin-guanine dinucleotide biosynthesis protein Bchromosome CDS3619227 513 + 0.483431
modD SDY_1236 putative molybdenum transport proteinchromosome CDS1143655 855 - 0.521637
moeA SDY_0760 molybdopterin biosynthesischromosome CDS706719 1236 + 0.563916
moeB SDY_0761 molybdopterin biosynthesischromosome CDS707954 750 + 0.561333
mog SDY_0009 Mogchromosome CDS9298 588 + 0.540816
nadA SDY_0694 quinolinate synthetase, A proteinchromosome CDS653866 1044 + 0.503831
nadB SDY_2815 quinolinate synthetase, B proteinchromosome CDS2605261 1623 + 0.531731
nadC SDY_0139 quinolinate phosphoribosyltransferasechromosome CDS138284 894 - 0.538031
nadE SDY_1540 NAD synthetasechromosome CDS1409204 828 - 0.490338
nadR SDY_4651 probable nadAB transcriptional regulatorchromosome CDS4354980 1254 + 0.513557
pabA SDY_3522 p-aminobenzoate synthetase, component IIchromosome CDS3257308 564 - 0.530142
pabB SDY_1718 p-aminobenzoate synthetase, component Ichromosome CDS1568692 1362 + 0.511747
pabC SDY_2054 4-amino-4-deoxychorismate lyasechromosome CDS1865882 810 - 0.504938
panB SDY_0154 3-methyl-2-oxobutanoate hydroxymethyltransferasechromosome CDS153922 795 + 0.538365
panC SDY_0155 pantothenate synthetasechromosome CDS154728 852 + 0.538732
panD SDY_0041 aspartate 1-decarboxylasechromosome CDS37108 381 - 0.524934
panF SDY_3435 sodium/pantothenate symporterchromosome CDS3192095 1458 + 0.538409
pdxA SDY_0077 pyridoxine biosynthesischromosome CDS71549 990 - 0.563636
pdxB SDY_2519 erythronate-4-phosphate dehyrogenasechromosome CDS2317402 1137 - 0.529464
pdxH SDY_1861 pyridoxinephosphate oxidasechromosome CDS1696852 657 - 0.520548
pdxJ SDY_2805 pyridoxine biosynthesischromosome CDS2595838 732 - 0.568306
pdxK SDY_2615 pyridoxal/pyridoxine/pyridoxamine kinasechromosome CDS2409846 852 - 0.5223
pdxY SDY_1859 pyridoxal kinase 2 / pyridoxine kinasechromosome CDS1694527 864 - 0.520833
pncB SDY_2326 nicotinate phosphoribosyltransferasechromosome CDS2112305 1203 + 0.512053
pnuC SDY_0695 required for NMN transportchromosome CDS654947 720 + 0.486111
poxB SDY_2392 pyruvate oxidasechromosome CDS2195953 1719 + 0.539267
ribA SDY_1353 GTP cyclohydrolase IIchromosome CDS1251155 591 - 0.499154
ribB SDY_3226 3,4 dihydroxy-2-butanone-4-phosphate synthasechromosome CDS2989128 654 - 0.530581
ribD SDY_0320 bifunctional pyrimidine deaminase/reductasechromosome CDS309351 1104 - 0.557065
ribE SDY_1888 riboflavin synthase, alpha chainchromosome CDS1722887 642 - 0.476636
ribF SDY_0047 putative regulatorchromosome CDS40196 942 + 0.528662
ribH SDY_0319 riboflavin synthase, beta chainchromosome CDS308792 471 - 0.515924
rimK SDY_0743 ribosomal protein S6 modification proteinchromosome CDS691731 903 - 0.559247
serA SDY_3169 D-3-phosphoglycerate dehydrogenasechromosome CDS2934988 1233 + 0.524736
serC SDY_2354 3-phosphoserine aminotransferasechromosome CDS2147238 1089 - 0.505969
tbpA SDY_0095 thiamin-binding periplasmic proteinchromosome CDS94966 984 - 0.53252
thiC SDY_3732 thiamin biosynthesis, pyrimidine moietychromosome CDS3461806 1896 + 0.558017
thiD SDY_2277 phosphomethylpyrimidine kinasechromosome CDS2071651 801 - 0.55181
thiE SDY_3733 thiamin biosynthesis, thiazole moietychromosome CDS3463701 636 + 0.581761
thiF SDY_3734 thiamin biosynthesis, thiazole moietychromosome CDS3464347 738 + 0.571816
thiG SDY_3736 thiamin biosynthesis, thiazole moietychromosome CDS3465195 846 + 0.578014
thiH SDY_3737 thiamin biosynthesis, thiazole moietychromosome CDS3466037 1134 + 0.551146
thiL SDY_0317 thiamin-monophosphate kinasechromosome CDS307298 978 - 0.5409
thiM SDY_2278 hydoxyethylthiazole kinasechromosome CDS2072448 789 - 0.544994
thiS SDY_3735 Sulfur transfer protein involved in thiamine biosynthesischromosome CDS3465068 201 + 0.542289
trpD SDY_1331 anthranilate synthase component IIchromosome CDS1231046 1596 - 0.558897
trpE SDY_1332 anthranilate synthase component Ichromosome CDS1232641 1563 - 0.541267
ubiA SDY_4534 4-hydroxybenzoate-octaprenyltransferasechromosome CDS4242293 873 - 0.515464
ubiB SDY_3901 ferrisiderophore reductasechromosome CDS3633046 702 - 0.524217
ubiC SDY_4535 chorismate lyasechromosome CDS4243178 609 - 0.502463
ubiE SDY_3910 UbiEchromosome CDS3640663 756 - 0.521164
ubiG SDY_2424 3-demethylubiquinone-9 3-methyltransferase and 2-octaprenyl-6-hydroxy phenol methylasechromosome CDS2223131 723 + 0.540802
ubiH SDY_3174 UbiHchromosome CDS2939872 1179 + 0.591179
ubiX SDY_2510 3-octaprenyl-4-hydroxybenzoate carboxy-lyasechromosome CDS2308562 570 - 0.52807
visC SDY_3175 conserved hypothetical proteinchromosome CDS2941073 1203 + 0.553616
yabJ SDY_0093 putative ATP-binding component of a transport systemchromosome CDS92698 699 - 0.569385
yacE SDY_0133 putative DNA repair proteinchromosome CDS133135 621 - 0.529791
ybeN SDY_0561 conserved hypothetical proteinchromosome CDS542741 642 - 0.495327
ycdW SDY_1004 putative dehydrogenasechromosome CDS950981 978 - 0.506135
ygcM SDY_2967 putative 6-pyruvoyl tetrahydrobiopterin synthasechromosome CDS2741868 366 + 0.489071
ygdL SDY_3030 putative enzymechromosome CDS2801774 807 - 0.546468
ygfA SDY_3170 putative ligasechromosome CDS2936601 549 - 0.508197
yggC SDY_3148 putative kinasechromosome CDS2917269 714 + 0.530812
yggW SDY_3117 putative oxidasechromosome CDS2891265 1137 - 0.53562
ygiG SDY_3241 putative kinasechromosome CDS3004319 372 - 0.516129
yhhU SDY_3630 conserved hypothetical proteinchromosome CDS3364362 588 + 0.566327
yiaE SDY_4350 putative dehydrogenasechromosome CDS4075692 987 - 0.518744
yieE SDY_4201 conserved hypothetical proteinchromosome CDS3931392 762 - 0.520997
yigC SDY_3902 putative oxidoreductasechromosome CDS3633793 1494 - 0.538822
yleB SDY_0598 conserved hypothetical proteinchromosome CDS568587 1176 + 0.569728
yojL SDY_0862 conserved hypothetical proteinchromosome CDS811497 1056 + 0.53125