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2024-04-28 12:36:29

Gene list

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COG category: Coenzyme transport and metabolism
Organism: Escherichia coli W3110, K-12

Number of genes found: 151

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Escherichia coli W3110, K-12
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
abgT predicted cryptic aminobenzoyl-glutamate transporterchromosome CDS1401961 1527 - 0.492469
acpT holo-(acyl carrier protein) synthase 2chromosome CDS4026859 588 - 0.564626
bioA 7,8-diaminopelargonic acid synthase, PLP-dependentchromosome CDS808390 1290 - 0.562791
bioB biotin synthasechromosome CDS809766 1041 + 0.555235
bioD dethiobiotin synthetasechromosome CDS812692 678 + 0.536873
bioF 8-amino-7-oxononanoate synthasechromosome CDS810803 1155 + 0.580087
birA bifunctional biotin-[acetylCoA carboxylase] holoenzyme synthetase and DNA-binding transcriptional repressor, bio-5'-AMP-bindingchromosome CDS3462634 966 - 0.493789
btuB vitamin B12/cobalamin outer membrane transporterchromosome CDS3471198 1845 - 0.502439
btuC vitamin B12 transporter subunitchromosome CDS1795886 981 - 0.554536
btuD vitamin B12 transporter subunitchromosome CDS1794523 750 - 0.552
btuR cob(I)alamin adenolsyltransferase/cobinamide ATP-dependent adenolsyltransferasechromosome CDS1329481 591 - 0.502538
citG triphosphoribosyl-dephospho-CoA transferasechromosome CDS645854 879 - 0.547213
citX apo-citrate lyase phosphoribosyl-dephospho-CoA transferasechromosome CDS646707 552 - 0.583333
coaA pantothenate kinasechromosome CDS3461655 951 + 0.440589
coaD pantetheine-phosphate adenylyltransferasechromosome CDS3830111 480 - 0.527083
coaE dephospho-CoA kinasechromosome CDS112599 621 - 0.52657
cobS cobalamin 5'-phosphate synthasechromosome CDS2066616 744 - 0.534946
cobT nicotinate-nucleotide dimethylbenzimidazole-P phophoribosyl transferasechromosome CDS2065525 1080 - 0.512963
cobU bifunctional cobinamide kinase and cobinamide phosphate guanylyltransferasechromosome CDS2067356 546 - 0.505495
cysD sulfate adenylyltransferase, subunit 2chromosome CDS2874077 909 - 0.530253
cysG fused siroheme synthase 1,3-dimethyluroporphyriongen III dehydrogenase/siroheme ferrochelatase and uroporphyrinogen methyltransferasechromosome CDS4141215 1374 - 0.546579
cysH 3'-phosphoadenosine 5'-phosphosulfate reductasechromosome CDS2886234 735 - 0.507483
dfp fused 4'-phosphopantothenoylcysteine decarboxylase and phosphopantothenoylcysteine synthetase, FMN-bindingchromosome CDS3826464 1221 - 0.536446
dxs 1-deoxyxylulose-5-phosphate synthase, thiamine-requiring, FAD-requiringchromosome CDS437539 1863 - 0.542673
entC isochorismate synthase 1chromosome CDS624108 1176 + 0.564626
fecE iron-dicitrate transporter subunitchromosome CDS4515370 768 - 0.540365
fepC iron-enterobactin transporter subunitchromosome CDS618607 816 - 0.539216
fhuC iron-hydroxamate transporter subunitchromosome CDS169778 798 + 0.568922
folA dihydrofolate reductasechromosome CDS49823 480 + 0.527083
folB bifunctional dihydroneopterin aldolase and dihydroneopterin triphosphate 2'-epimerasechromosome CDS3202877 369 - 0.509485
folC bifunctional folylpolyglutamate synthase and dihydrofolate synthasechromosome CDS2437120 1269 - 0.560284
folD bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase and 5,10-methylene-tetrahydrofolate cyclohydrolasechromosome CDS556098 867 - 0.543253
folE GTP cyclohydrolase Ichromosome CDS2246318 669 - 0.512706
folK 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinasechromosome CDS157253 480 - 0.5
folP 7,8-dihydropteroate synthasechromosome CDS3323918 849 - 0.515901
folX D-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase and dihydroneopterin aldolasechromosome CDS2426771 363 + 0.449036
fre flavin reductasechromosome CDS3609453 702 - 0.52849
gshA gamma-glutamate-cysteine ligasechromosome CDS2813539 1557 - 0.513166
gshB glutathione synthetasechromosome CDS3090534 951 + 0.534175
hemA glutamyl tRNA reductasechromosome CDS1265291 1257 + 0.543357
hemB porphobilinogen synthasechromosome CDS387977 975 - 0.539487
hemC hydroxymethylbilane synthasechromosome CDS3645915 942 + 0.561571
hemD uroporphyrinogen III synthasechromosome CDS3646853 741 + 0.529015
hemE uroporphyrinogen decarboxylasechromosome CDS3437901 1065 - 0.560563
hemF coproporphyrinogen III oxidasechromosome CDS2558671 900 + 0.546667
hemG protoporphyrin oxidase, flavoproteinchromosome CDS3601528 546 - 0.518315
hemH ferrochelatasechromosome CDS497279 963 + 0.538941
hemL glutamate-1-semialdehyde aminotransferasechromosome CDS173602 1281 - 0.555035
hemN coproporphyrinogen III oxidase, SAM and NAD(P)H dependent, oxygen-independentchromosome CDS3583263 1374 - 0.531295
hemX uroporphyrinogen III methylasechromosome CDS3647615 1182 + 0.533841
hemY predicted protoheme IX synthesis proteinchromosome CDS3648799 1197 + 0.549708
ilvB acetolactate synthase I, large subunitchromosome CDS3787631 1689 + 0.563055
ilvC ketol-acid reductoisomerase, NAD(P)-bindingchromosome CDS3677236 1476 - 0.53794
ilvE branched-chain amino-acid aminotransferasechromosome CDS3683268 930 - 0.549462
ilvG chromosome pseudo3684477 1645 - 0.546505
ilvI acetolactate synthase III, large subunitchromosome CDS85630 1725 + 0.529275
ispA geranyltranstransferasechromosome CDS439426 900 - 0.542222
ispB octaprenyl diphosphate synthasechromosome CDS3333565 972 + 0.526749
kbl glycine C-acetyltransferasechromosome CDS3847864 1197 + 0.542189
ldhA fermentative D-lactate dehydrogenase, NAD-dependentchromosome CDS1443568 990 - 0.50101
lipA lipoate synthasechromosome CDS659673 966 - 0.534162
lipB lipoyl-protein ligasechromosome CDS662059 642 - 0.476636
lplA lipoate-protein ligase Achromosome CDS4627781 1017 - 0.578171
menA 1,4-dihydroxy-2-naphthoate octaprenyltransferasechromosome CDS3516332 927 + 0.533981
menB dihydroxynaphthoic acid synthetasechromosome CDS2380632 858 - 0.555944
menC o-succinylbenzoyl-CoA synthasechromosome CDS2379670 963 - 0.589823
menD bifunctional 2-oxoglutarate decarboxylase and SHCHC synthasechromosome CDS2382259 1671 - 0.581089
menF isochorismate synthase 2chromosome CDS2384018 1296 - 0.533951
metK methionine adenosyltransferase 1chromosome CDS3085362 1155 + 0.532468
mhpA 3-(3-hydroxyphenyl)propionate hydroxylasechromosome CDS367835 1665 + 0.56997
moaA molybdopterin biosynthesis protein Achromosome CDS817466 990 + 0.541414
moaB molybdopterin biosynthesis protein Bchromosome CDS818477 513 + 0.520468
moaC molybdopterin biosynthesis, protein Cchromosome CDS818992 486 + 0.559671
moaD molybdopterin synthase, small subunitchromosome CDS819470 246 + 0.556911
moaE molybdopterin synthase, large subunitchromosome CDS819717 453 + 0.567329
mobA molybdopterin-guanine dinucleotide synthasechromosome CDS3594682 585 + 0.500855
mobB molybdopterin-guanine dinucleotide biosynthesis protein Bchromosome CDS3595263 513 + 0.487329
moeA molybdopterin biosynthesis proteinchromosome CDS865551 1236 - 0.563916
moeB molybdopterin synthase sulfurylasechromosome CDS864802 750 - 0.552
mog predicted molybdochelatasechromosome CDS9306 588 + 0.544218
nadA quinolinate synthase, subunit Achromosome CDS782507 1044 + 0.501916
nadB quinolinate synthase, L-aspartate oxidase (B protein) subunitchromosome CDS2709076 1623 + 0.531731
nadC quinolinate phosphoribosyltransferasechromosome CDS117752 894 - 0.53132
nadD nicotinic acid mononucleotide adenylyltransferase, NAD(P)-dependentchromosome CDS670353 642 - 0.5
nadE NAD synthetase, NH3/glutamine-dependentchromosome CDS1824172 828 + 0.495169
nadR bifunctional DNA-binding transcriptional repressor and NMN adenylyltransferasechromosome CDS4631995 1233 + 0.509327
oxc predicted oxalyl-CoA decarboxylasechromosome CDS2495702 1695 - 0.466077
paaK phenylacetyl-CoA ligasechromosome CDS1463839 1314 + 0.518265
pabA aminodeoxychorismate synthase, subunit IIchromosome CDS4149587 564 + 0.533688
pabB aminodeoxychorismate synthase, subunit Ichromosome CDS1896519 1362 + 0.509545
pabC 4-amino-4-deoxychorismate lyase component of para-aminobenzoate synthase multienzyme complexchromosome CDS1154877 810 + 0.506173
panB 3-methyl-2-oxobutanoate hydroxymethyltransferasechromosome CDS148807 795 - 0.545912
panC pantothenate synthetasechromosome CDS147944 852 - 0.526995
panD aspartate 1-decarboxylasechromosome CDS146314 381 - 0.524934
panE 2-dehydropantoate reductase, NADPH-specificchromosome CDS442828 912 - 0.51864
panF pantothenate:sodium symporterchromosome CDS3407462 1452 + 0.543388
pdxA 4-hydroxy-L-threonine phosphate dehydrogenase, NAD-dependentchromosome CDS52427 990 - 0.563636
pdxB erythronate-4-phosphate dehydrogenasechromosome CDS2442161 1137 - 0.530343
pdxH pyridoxine 5'-phosphate oxidasechromosome CDS1719065 657 - 0.519026
pdxJ pyridoxine 5'-phosphate synthasechromosome CDS2699654 732 - 0.564208
pdxK pyridoxal-pyridoxamine kinase/hydroxymethylpyrimidine kinasechromosome CDS2541832 852 - 0.5223
pdxY pyridoxal kinase 2/pyridoxine kinasechromosome CDS1716740 864 - 0.530093
pncB nicotinate phosphoribosyltransferasechromosome CDS989576 1203 - 0.512053
pnuC predicted nicotinamide mononucleotide transporterchromosome CDS783588 720 + 0.481944
poxB pyruvate dehydrogenase (pyruvate oxidase), thiamin-dependent, FAD-bindingchromosome CDS909753 1719 - 0.54043
ribA GTP cyclohydrolase IIchromosome CDS1340284 591 - 0.500846
ribB 3,4 dihydroxy-2-butanone-4-phosphate synthasechromosome CDS3182469 654 - 0.518349
ribC riboflavin synthase, alpha subunitchromosome CDS1744315 642 - 0.475078
ribD fused diaminohydroxyphosphoribosylaminopyrimidin e deaminase and 5-amino-6-(5-phosphoribosylamino) uracil reductasechromosome CDS432679 1104 + 0.553442
ribE riboflavin synthase beta chainchromosome CDS433871 471 + 0.522293
ribF bifunctional riboflavin kinase and FAD synthetasechromosome CDS21407 942 + 0.536093
rimK ribosomal protein S6 modification proteinchromosome CDS892389 903 + 0.562569
rraA ribonuclease E (RNase E) inhibitor proteinchromosome CDS3517351 486 + 0.522634
serA D-3-phosphoglycerate dehydrogenasechromosome CDS3055834 1233 - 0.529603
serC 3-phosphoserine/phosphohydroxythreonineaminotran sferasechromosome CDS958075 1089 + 0.501377
tbpA thiamin transporter subunitchromosome CDS74497 984 - 0.53252
thiC thiamin (pyrimidine moiety) biosynthesis proteinchromosome CDS3440582 1896 + 0.557489
thiD bifunctional hydroxy-methylpyrimidine kinase and hydroxy-phosphomethylpyrimidine kinasechromosome CDS2187050 801 - 0.554307
thiE thiamin phosphate synthasechromosome CDS3442477 636 + 0.580189
thiF thiamin (thiazole moiety) biosynthesis proteinchromosome CDS3443105 756 + 0.575397
thiG thiamin biosynthesis ThiGH complex subunitchromosome CDS3444046 771 + 0.584955
thiH thiamin biosynthesis ThiGH complex subunitchromosome CDS3444813 1134 + 0.550265
thiL thiamin-monophosphate kinasechromosome CDS434858 978 + 0.543967
thiM hydoxyethylthiazole kinasechromosome CDS2187847 789 - 0.541191
thiQ thiamin transporter subunitchromosome CDS72229 699 - 0.570815
thiS sulphur carrier proteinchromosome CDS3443844 201 + 0.557214
tiaE 2-keto-D-gluconate reductasechromosome CDS3922131 975 - 0.52
trpD fused glutamine amidotransferase (component II) of anthranilate synthase and anthranilate phosphoribosyl transferasechromosome CDS1321503 1596 - 0.56391
trpE component I of anthranilate synthasechromosome CDS1323098 1563 - 0.543826
ubiA p-hydroxybenzoate octaprenyltransferasechromosome CDS4256606 873 + 0.517755
ubiC chorismate pyruvate lyasechromosome CDS4256096 498 + 0.528112
ubiD 3-octaprenyl-4-hydroxybenzoate decarboxylasechromosome CDS3610200 1494 - 0.538153
ubiE bifunctional 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase and S-adenosylmethionine:2-DMK methyltransferasechromosome CDS3617071 756 - 0.521164
ubiF 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinolo xygenasechromosome CDS695523 1176 + 0.571429
ubiG bifunctional 3-demethylubiquinone-9 3-methyltransferase and 2-octaprenyl-6-hydroxy phenol methylasechromosome CDS2344237 723 + 0.542185
ubiH 2-octaprenyl-6-methoxyphenol hydroxylase, FAD/NAD(P)-bindingchromosome CDS3050996 1179 - 0.59542
ubiX 3-octaprenyl-4-hydroxybenzoate carboxy-lyasechromosome CDS2433503 570 - 0.531579
visC predicted oxidoreductase, FAD/NAD(P)-binding domainchromosome CDS3049771 1203 - 0.54946
yagJ hypothetical proteinchromosome CDS290724 732 + 0.489071
ybbW predicted allantoin transporterchromosome CDS536857 1455 + 0.470103
ycjG L-Ala-D/L-Glu epimerasechromosome CDS1390644 966 + 0.546584
ydhR hypothetical proteinchromosome CDS1748414 306 + 0.447712
yfbN hypothetical proteinchromosome CDS2392380 717 - 0.390516
ygcM 6-pyruvoyl tetrahydrobiopterin synthasechromosome CDS2890870 366 + 0.494536
ygdL conserved hypothetical proteinchromosome CDS2943692 807 - 0.546468
ygfA predicted ligasechromosome CDS3054897 549 + 0.519126
yggC conserved hypothetical protein with nucleoside triphosphate hydrolase domainchromosome CDS3072632 714 - 0.502801
yggW predicted oxidoreductasechromosome CDS3095923 1137 + 0.532102
yieE predicted phosphopantetheinyl transferasechromosome CDS3742051 762 - 0.520997
ynfK predicted dethiobiotin synthetasechromosome CDS1668238 696 - 0.521552
yojL predicted thiamine biosynthesis lipoproteinchromosome CDS2313813 1056 - 0.534091