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2024-05-04 02:41:12

Gene list

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COG category: Coenzyme transport and metabolism
Organism: Shigella flexneri 2a str. 2457T, 2457T

Number of genes found: 144

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Shigella flexneri 2a str. 2457T, 2457T
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA S3226 putative class II aminotransferasechromosome CDS3110642 789 + 0.52725
NA S1746 hypothetical proteinchromosome CDS1680782 696 - 0.520115
NA S2703 dihydropteroate synthasechromosome CDS2598850 816 + 0.607843
NA S2577 putative enzymechromosome CDS2471457 1695 - 0.464897
NA S1827 hypothetical proteinchromosome CDS1765979 306 + 0.447712
NA S1278 putative ferric enterobactin transport ATP-binding proteinchromosome CDS1237081 759 - 0.540184
NA S3225 putative class II aminotransferasechromosome CDS3110259 351 + 0.507123
apbA S0370 ketopantoate reductasechromosome CDS372111 912 - 0.513158
bioA S0765 7,8-diaminopelargonic acid synthetasechromosome CDS746952 1290 - 0.560465
bioB S0766 biotin synthesis, sulfur insertion?chromosome CDS748328 1041 + 0.554275
bioD S0769 dethiobiotin synthetasechromosome CDS751254 678 + 0.538348
bioF S0767 8-amino-7-oxononanoate synthasechromosome CDS749365 1155 + 0.586147
birA S3689 biotin-[acetyl CoA carboxylase] holoenzyme synthetase and biotin operon repressorchromosome CDS3579419 966 - 0.494824
btuB S3696 outer membrane receptor for transport of vitamin B12, E colicins, and bacteriophage BF23chromosome CDS3587724 1845 - 0.500271
btuC S1637 Vitamin B12 transport permease proteinchromosome CDS1590231 981 + 0.552497
btuD S1639 Vitamin B12 transport protein BtuDchromosome CDS1591825 750 + 0.550667
btuR S1357 cob(I)alamin adenolsyltransferasechromosome CDS1321918 591 - 0.510998
citG S0537 hypothetical proteinchromosome CDS548368 879 - 0.550626
coaA S3688 pantothenate kinasechromosome CDS3578464 927 + 0.445523
cobS S2170 cobalamin 5-phosphate synthasechromosome CDS2057157 744 - 0.533602
cobT S2169 nicotinate-nucleotide dimethylbenzimidazole-P phophoribosyl transferasechromosome CDS2056066 1080 - 0.512037
cysD S2968 ATP-sulfurylase (ATP:sulfate adenylyltransferase), subunit 2chromosome CDS2842262 909 - 0.537954
cysG S4376 uroporphyrinogen III methylasechromosome CDS4304284 1374 - 0.542213
cysH S2971 3-phosphoadenosine 5-phosphosulfate reductasechromosome CDS2846306 735 - 0.514286
dfp S4090 flavoproteinchromosome CDS3990992 1293 - 0.525135
dinD S4084 DNA-damage-inducible proteinchromosome CDS3986358 825 - 0.45697
dxs S0365 1-deoxyxylulose-5-phosphate synthase; flavoproteinchromosome CDS366822 1863 - 0.538916
fepC S0508 ATP-binding component of ferric enterobactin transportchromosome CDS518740 816 - 0.53799
fhuC S0146 ATP-binding component of hydroxymate-dependent iron transportchromosome CDS161047 798 + 0.561404
folA S0047 dihydrofolate reductase type Ichromosome CDS48627 480 + 0.529167
folC S2526 dihydrofolate:folylpolyglutamate synthetase; dihydrofolate synthetasechromosome CDS2419243 1269 - 0.559496
folD S0468 5,10-methylene-tetrahydrofolate dehydrogenase; 5,10-methylene-tetrahydrofolate cyclohydrolasechromosome CDS475188 867 - 0.545559
folE S2367 GTP cyclohydrolase Ichromosome CDS2244919 669 - 0.509716
folK S0137 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokin asechromosome CDS148522 480 - 0.520833
folP S3435 7,8-dihydropteroate synthasechromosome CDS3307363 894 - 0.510067
folX S2514 D-erythro-7,8-dihydroneopterin triphosphate epimerasechromosome CDS2408894 363 + 0.449036
gshA S2902 gamma-glutamate-cysteine ligasechromosome CDS2783416 1557 - 0.511882
gshB S3142 glutathione synthetasechromosome CDS3022370 951 + 0.535226
hemA S1297 glutamyl-tRNA reductasechromosome CDS1260310 1257 + 0.538584
hemB S0270 5-aminolevulinate dehydratase; porphobilinogen synthasechromosome CDS270893 1008 + 0.537698
hemC S3879 porphobilinogen deaminase, hydroxymethylbilane synthasechromosome CDS3774178 942 + 0.559448
hemD S3880 uroporphyrinogen III synthasechromosome CDS3775116 741 + 0.530364
hemE S3666 uroporphyrinogen decarboxylasechromosome CDS3555605 1065 - 0.561502
hemG S3826 protoporphyrin oxidasechromosome CDS3725208 546 - 0.514652
hemH S0427 ferrochelatasechromosome CDS434277 963 + 0.543095
hemL S0149 glutamate-1-semialdehyde aminotransferase (aminomutase)chromosome CDS164748 1281 - 0.557377
hemN S3809 O2-independent coproporphyrinogen III oxidasechromosome CDS3707113 1374 - 0.528384
hemX S3881 uroporphyrinogen III methylasechromosome CDS3775878 1200 + 0.534167
hemY S3882 HemY proteinchromosome CDS3777080 1197 + 0.543024
ilvB S3978 acetolactate synthase I, valine-sensitive, large subunitchromosome CDS3872959 1689 - 0.560687
ilvC S3910 ketol-acid reductoisomerasechromosome CDS3804464 1476 - 0.53523
ilvE S3914 branched-chain amino-acid aminotransferasechromosome CDS3810438 930 - 0.544086
ilvG S3917 acetolactate synthase II, large subunitchromosome CDS3811647 1647 - 0.545841
ilvI S0074 acetolactate synthase III, large subunitchromosome CDS82873 1809 + 0.524599
ispA S0366 geranyltranstransferase (farnesyldiphosphate synthase)chromosome CDS368709 900 - 0.543333
ispB S3445 octaprenyl diphosphate synthasechromosome CDS3317009 972 + 0.526749
kbl S4110 2-amino-3-ketobutyrate CoA ligase (glycine acetyltransferase)chromosome CDS4010194 1197 + 0.54386
kdtB S4095 putative enzyme of lipopolysaccharide synthesischromosome CDS3994639 480 - 0.527083
ldhA S1459 fermentative D-lactate dehydrogenasechromosome CDS1423921 990 + 0.50202
lipA S0675 lipoate synthesis protein LipAchromosome CDS686537 966 + 0.534162
lipB S0673 lipoate biosynthesis protein LipBchromosome CDS684541 576 + 0.472222
menA S3739 1,4-dihydroxy-2-naphthoate octaprenyltransferasechromosome CDS3637791 927 + 0.533981
menB S2475 dihydroxynaphtoic acid synthetasechromosome CDS2368149 858 - 0.551282
menC S2474 O-succinylbenzoyl-CoA synthasechromosome CDS2367187 963 - 0.5919
menD S2477 2-oxoglutarate decarboxylase; SHCHC synthasechromosome CDS2369776 1671 - 0.579294
menF S2478 isochorismate hydroxymutase 2chromosome CDS2371535 1071 - 0.538749
menG S3740 2-demethylmenaquinone 2-C-methyltransferasechromosome CDS3638810 486 + 0.522634
metK S3137 methionine adenosyltransferase 1 (AdoMet synthetase)chromosome CDS3017185 1155 + 0.532468
moaA S0772 molybdopterin biosynthesis protein Achromosome CDS756028 990 + 0.540404
moaB S0773 molybdopterin biosynthesis protein Bchromosome CDS757039 513 + 0.524366
moaC S0774 molybdopterin biosynthesis protein Cchromosome CDS757554 486 + 0.561728
moaD S0775 molybdopterin biosynthesis protein Dchromosome CDS758032 246 + 0.569106
moaE S0776 molybdopterin converting factor, subunit 2chromosome CDS758279 453 + 0.578366
mobA S3819 molybdopterin-guanine dinucleotide biosynthesis protein Achromosome CDS3718533 585 + 0.509402
mobB S3820 molybdopterin-guanine dinucleotide biosynthesis protein Bchromosome CDS3719099 528 + 0.484848
modD S1276 putative molybdenum transport proteinchromosome CDS1235408 855 - 0.523977
moeA S0820 molybdopterin biosynthesis MoeA proteinchromosome CDS805450 1236 - 0.563107
moeB S0819 molybdopterin biosynthesis MoeB proteinchromosome CDS804701 750 - 0.558667
mog S0009 molybdopterin biosynthesis proteinchromosome CDS9305 588 + 0.540816
nadA S0562 quinolinate synthetase, A proteinchromosome CDS570938 1044 - 0.501916
nadC S0108 quinolinate phosphoribosyltransferasechromosome CDS115503 894 - 0.533557
nadE S1603 NAD synthetasechromosome CDS1560542 828 - 0.487923
nadR S4693 probable nadAB transcriptional regulatorchromosome CDS4585051 1254 + 0.513557
pabA S4384 p-aminobenzoate synthetase, component IIchromosome CDS4312665 564 + 0.537234
pabB S1531 p-aminobenzoate synthetase, component Ichromosome CDS1491052 1362 - 0.507342
pabC S1180 4-amino-4-deoxychorismate lyasechromosome CDS1143908 810 + 0.506173
padI S2955 phenylacrylic acid decarboxylase-like proteinchromosome CDS2832134 594 - 0.570707
panB S0133 3-methyl-2-oxobutanoate hydroxymethyltransferasechromosome CDS146389 795 - 0.538365
panC S0132 pantothenate synthetasechromosome CDS145526 852 - 0.5223
panD S0130 aspartate 1-decarboxylasechromosome CDS143896 381 - 0.527559
panF S3513 sodium/pantothenate symporterchromosome CDS3385261 1452 + 0.541322
pdxA S0051 pyridoxal phosphate biosynthetic protein PdxAchromosome CDS51231 990 - 0.562626
pdxB S2531 erythronate-4-phosphate dehyrogenasechromosome CDS2424284 1137 - 0.5365
pdxH S1795 pyridoxinephosphate oxidasechromosome CDS1733707 657 - 0.515982
pdxJ S2799 pyridoxal phosphate biosynthetic proteinchromosome CDS2691657 732 - 0.553279
pdxK S2619 pyridoxal/pyridoxine/pyridoxamine kinasechromosome CDS2511819 852 - 0.518779
pdxY S1793 pyridoxal kinase 2 / pyridoxine kinasechromosome CDS1731382 864 - 0.52662
pncB S0992 nicotinate phosphoribosyltransferasechromosome CDS978345 1203 - 0.512884
pnuC S0561 PnuC proteinchromosome CDS570181 720 - 0.483333
poxB S0867 pyruvate oxidasechromosome CDS853384 1719 - 0.536358
ribA S1364 GTP cyclohydrolase IIchromosome CDS1332721 591 - 0.499154
ribB S3286 3,4 dihydroxy-2-butanone-4-phosphate synthasechromosome CDS3165611 654 - 0.527523
ribD S0359 bifunctional pyrimidine deaminase/reductasechromosome CDS362087 1104 + 0.557065
ribE S1822 riboflavin synthase, alpha chainchromosome CDS1761880 642 - 0.478193
ribF S0024 putative regulatorchromosome CDS20361 942 + 0.529724
ribH S0360 riboflavin synthase, beta chainchromosome CDS363279 471 + 0.522293
rimK S0848 ribosomal protein S6 modification proteinchromosome CDS833540 903 + 0.555925
serA S3098 D-3-phosphoglycerate dehydrogenasechromosome CDS2983573 1233 - 0.52717
serC S0966 3-phosphoserine aminotransferasechromosome CDS943974 1089 + 0.504132
tbpA S0065 thiamin-binding periplasmic proteinchromosome CDS71825 984 - 0.527439
thiC S3669 thiamine biosynthesis protein, pyrimidine moietychromosome CDS3558287 1896 + 0.55538
thiD S2290 phosphomethylpyrimidine kinasechromosome CDS2170763 801 - 0.55181
thiE S3670 thiamin biosynthesis protein, thiazole moietychromosome CDS3560182 636 + 0.578616
thiF S3671 thiamin biosynthesis protein, thiazole moietychromosome CDS3560810 756 + 0.56746
thiG S3672 thiamin biosynthesis protein, thiazole moietychromosome CDS3561676 846 + 0.58156
thiH S3673 thiamin biosynthesis protein, thiazole moietychromosome CDS3562518 1134 + 0.547619
thiL S0362 thiamin-monophosphate kinasechromosome CDS364266 978 + 0.543967
thiM S2291 hydoxyethylthiazole kinasechromosome CDS2171560 789 - 0.541191
trpD S1352 anthranilate synthase component II, glutamine amidotransferase and phosphoribosylanthranilate transferasechromosome CDS1315976 1596 - 0.561404
trpE S1353 anthranilate synthase component Ichromosome CDS1317571 1563 - 0.539987
ubiA S3566 4-hydroxybenzoate-octaprenyltransferasechromosome CDS3434864 873 + 0.510882
ubiB S3832 ferrisiderophore reductase, flavin reductase (NADPH:flavin oxidoreductase)chromosome CDS3732944 702 - 0.527066
ubiC S3565 chorismate lyasechromosome CDS3434354 498 + 0.52008
ubiE S3843 ubiquinone/menaquinone biosynthesis methyltransferasechromosome CDS3740562 756 - 0.519841
ubiG S2445 3-demethylubiquinone-9 3-methyltransferase and 2-octaprenyl-6-hydroxy phenol methylasechromosome CDS2334464 723 + 0.543568
ubiH S3092 2-octaprenyl-6-methoxyphenol 4-monoxygenasechromosome CDS2978343 1179 - 0.597116
ubiX S2522 3-octaprenyl-4-hydroxybenzoate carboxy-lyasechromosome CDS2415626 570 - 0.531579
visC S3091 hypothetical proteinchromosome CDS2977118 1203 - 0.551122
yabJ S0063 putative ATP-binding component of a transport systemchromosome CDS69557 699 - 0.569385
yacE S0102 putative DNA repair proteinchromosome CDS110588 621 - 0.523349
ybdU S0538 hypothetical proteinchromosome CDS549283 489 - 0.595092
ybeN S0664 hypothetical proteinchromosome CDS676180 642 + 0.498442
yclC S2954 putative 4-hydroxybenzoate decarboxylasechromosome CDS2831184 951 - 0.56572
ygcM S2974 putative 6-pyruvoyl tetrahydrobiopterin synthasechromosome CDS2850944 363 + 0.490358
ygdL S3021 putative enzymechromosome CDS2900162 807 - 0.551425
ygfA S3097 putative ligasechromosome CDS2982244 549 + 0.520947
yggW S3150 putative oxidasechromosome CDS3027751 1137 + 0.523307
ygiG S3304 putative kinasechromosome CDS3181991 369 - 0.506775
yhhU S4270 hypothetical proteinchromosome CDS4189923 588 - 0.566327
yiaE S4182 putative dehydrogenasechromosome CDS4085869 975 - 0.52
yieE S4024 hypothetical proteinchromosome CDS3917759 750 + 0.521333
yigC S3833 putative oxidoreductasechromosome CDS3733691 1494 - 0.536145
yleB S0642 hypothetical proteinchromosome CDS651676 1176 - 0.560374
yojL S2428 hypothetical proteinchromosome CDS2311322 1056 - 0.534091