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2024-05-07 05:36:18

Gene list

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COG category: Coenzyme transport and metabolism
Organism: Yersinia pestis KIM, KIM

Number of genes found: 139

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Yersinia pestis KIM, KIM
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
apbA apbA proteinchromosome CDS1141697 912 - 0.464912
ascD putative CDP-6-deoxy-delta-3,4-glucoseen reductasechromosome CDS1202399 990 + 0.374747
bioA 7,8-diaminopelargonic acid synthetasechromosome CDS3339833 1281 + 0.533958
bioB biotin synthetasechromosome CDS3338697 1038 - 0.510597
bioD dethiobiotin synthetasechromosome CDS3336044 738 - 0.539295
bioF 8-amino-7-oxononanoate synthasechromosome CDS3337546 1152 - 0.580729
birA biotin-[acetyl CoA carboxylase] holoenzyme synthetasechromosome CDS529088 960 + 0.40625
btuB outer membrane receptor for transport of vitamin B12, E colicins, and bacteriophage BF23chromosome CDS352703 1962 + 0.469419
btuC vitamin B12 transport permease proteinchromosome CDS2107432 1077 + 0.486537
btuD ATP-binding component of vitamin B12 transport systemchromosome CDS2109154 762 + 0.469816
btuR cob(I)alamin adenolsyltransferasechromosome CDS2263909 591 - 0.497462
coaA pantothenate kinasechromosome CDS530082 951 - 0.398528
cysD ATP-sulfurylase, subunit 2chromosome CDS924169 909 + 0.491749
cysG uroporphyrinogen III methylasechromosome CDS4395216 1449 - 0.529331
dfp flavoprotein affecting synthesis of DNA and pantothenate metabolismchromosome CDS99711 1332 + 0.476727
dxs 1-deoxyxylulose-5-phosphate synthasechromosome CDS1136081 1860 - 0.489247
fhuC ATP-binding component of hydroxymate-dependent iron ABC transporterchromosome CDS890477 795 + 0.543396
folA dihydrofolate reductase type Ichromosome CDS4099022 483 - 0.486542
folC dihydrofolate:folylpolyglutamate synthetasechromosome CDS1771007 1383 + 0.532176
folD 5,10-methylene-tetrahydrofolate dehydrogenasechromosome CDS1248325 867 - 0.514418
folE GTP cyclohydrolase Ichromosome CDS2938298 717 - 0.456067
folK 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokin asechromosome CDS879625 480 - 0.529167
folP 7,8-dihydropteroate synthasechromosome CDS766683 834 + 0.476019
gshA gamma-glutamate-cysteine ligasechromosome CDS997588 1599 + 0.481551
gshB glutathione synthetasechromosome CDS3655274 960 + 0.491667
hemA glutamyl-tRNA reductasechromosome CDS2527649 1317 - 0.501898
hemB 5-aminolevulinate dehydratasechromosome CDS509248 1023 + 0.477028
hemC porphobilinogen deaminase; hydroxymethylbilane synthasechromosome CDS425084 1110 - 0.525225
hemD uroporphyrinogen III synthasechromosome CDS424338 750 - 0.512
hemE uroporphyrinogen decarboxylasechromosome CDS557874 1068 + 0.512172
hemF coproporphyrinogen III oxidasechromosome CDS1608645 930 - 0.533333
hemG protoporphyrin oxidasechromosome CDS521384 534 + 0.428839
hemH ferrochelatasechromosome CDS1200839 963 + 0.457944
hemL glutamate-1-semialdehyde aminotransferasechromosome CDS894727 1281 - 0.508977
hemN O2-independent coproporphyrinogen III oxidasechromosome CDS4228457 1380 - 0.477536
hemX uroporphyrinogen III methylasechromosome CDS423183 1134 - 0.506173
hemY hemY proteinchromosome CDS421960 1221 - 0.525798
ilvB acetolactate synthase I,valine-sensitive, large subunitchromosome CDS2346815 1683 + 0.498515
ilvC ketol-acid reductoisomerasechromosome CDS381832 1479 + 0.503043
ilvE branched-chain amino-acid aminotransferasechromosome CDS372461 1002 + 0.511976
ilvG acetohydroxy acid synthase IIchromosome CDS370613 1647 + 0.532483
ilvI acetolactate synthase III, large subunitchromosome CDS4034795 1782 - 0.497194
ispA geranyltranstransferasechromosome CDS1138096 921 - 0.505972
ispB octaprenyl diphosphate synthasechromosome CDS755300 972 - 0.489712
kbl 2-amino-3-ketobutyrate CoA ligase (glycine acetyltransferase)chromosome CDS89982 1242 - 0.500805
kdtB putative enzyme of lipopolysaccharide synthesischromosome CDS96908 480 + 0.4625
lcrG low calcium response locus protein GpCD1 CDS25022 288 + 0.46875
ldhA fermentative D-lactate dehydrogenase, NAD-dependentchromosome CDS2205964 1050 - 0.449524
lipA lipoate biosynthesis protein Achromosome CDS1315206 966 - 0.501035
lipB lipoate biosynthesis proteinchromosome CDS1316364 702 - 0.490029
lplA lipoate-protein ligase Achromosome CDS2118545 1017 + 0.450344
menA 1,4-dihydroxy-2-naphthoate octaprenyltransferasechromosome CDS311719 930 - 0.488172
menB dihydroxynaphtoic acid synthetasechromosome CDS1837037 867 + 0.516724
menC o-succinylbenzoyl-CoA synthasechromosome CDS1837903 972 + 0.569959
menD 2-oxoglutarate decarboxylasechromosome CDS1834514 1704 + 0.569836
menF isochorismate hydroxymutase 2chromosome CDS1832913 1374 + 0.5131
menG 2-heptaprenyl-1,4-naphthoquinonemethyltransferas echromosome CDS311092 486 - 0.475309
metK methionine adenosyltransferase 1chromosome CDS3651592 1155 + 0.497835
moaA molybdopterin biosynthesis protein Achromosome CDS3328974 1026 - 0.491228
moaC molybdopterin biosynthesis protein Cchromosome CDS3328394 483 - 0.532091
moaD molybdopterin biosynthesis proteinchromosome CDS3328152 246 - 0.528455
moaE molybdopterin converting factor, subunit 2chromosome CDS3327697 459 - 0.542484
mobA molybdopterin-guanine dinucleotide synthasechromosome CDS4238480 642 + 0.433022
mobB molybdopterin-guanine dinucleotide biosynthesis protein Bchromosome CDS4239094 558 + 0.408602
moeA molybdopterin biosynthesis proteinchromosome CDS2950278 1275 + 0.499608
moeB molybdopterin biosynthesis proteinchromosome CDS2951524 801 + 0.496879
mog putative molybdochetalasechromosome CDS4126571 588 - 0.45068
nadA quinolinate synthetasechromosome CDS3360072 1062 - 0.507533
nadB quinolinate synthetase, B proteinchromosome CDS1432477 1638 - 0.484127
nadC quinolinate phosphoribosyltransferasechromosome CDS849223 948 - 0.483122
pabA p-aminobenzoate synthetase, component IIchromosome CDS4411873 576 + 0.519097
pabB p-aminobenzoate synthetase, component Ichromosome CDS2796181 1377 + 0.511256
pabC 4-amino-4-deoxychorismate lyasechromosome CDS1944034 807 + 0.488228
panB 3-methyl-2-oxobutanoate hydroxymethyltransferasechromosome CDS878559 864 - 0.511574
panC pantothenate synthetasechromosome CDS877617 855 - 0.530994
panD aspartate 1-decarboxylasechromosome CDS876826 381 - 0.47769
panF sodium/pantothenate symporterchromosome CDS225850 1461 + 0.527721
pdxA pyridoxine biosynthesis proteinchromosome CDS4093820 1008 + 0.499008
pdxB erythronate-4-phosphate dehydrogenasechromosome CDS1765624 1188 + 0.537037
pdxH pyridoxinephosphate oxidasechromosome CDS2165025 654 + 0.490826
pdxJ pyridoxine biosynthesischromosome CDS1443983 732 + 0.495902
pdxY pyridoxal kinase 2 / pyridoxine kinasechromosome CDS2167289 861 + 0.502904
pncB nicotinate phosphoribosyltransferasechromosome CDS3044056 1251 + 0.47482
pnuC nucleoside/purine/pyrimidine transporterchromosome CDS3359225 726 - 0.461433
poxB pyruvate oxidasechromosome CDS3126012 1722 + 0.522648
ribA GTP cyclohydrolase IIchromosome CDS2275663 603 - 0.466003
ribB 3,4 dihydroxy-2-butanone-4-phosphate synthasechromosome CDS3903743 654 - 0.524465
ribD bifunctional pyrimidine deaminase/reductasechromosome CDS1129411 1110 + 0.527928
ribE riboflavin synthase, alpha chainchromosome CDS2147348 657 + 0.450533
ribF putative regulatorchromosome CDS4113900 939 - 0.500533
ribH riboflavin synthase, beta chainchromosome CDS1130596 531 + 0.47646
serA D-3-phosphoglycerate dehydrogenasechromosome CDS3633170 1344 - 0.486607
serC 3-phosphoserine aminotransferasechromosome CDS3078156 1086 - 0.474217
tbpA thiamin-binding periplasmic protein of ABC transporterchromosome CDS4051526 1083 + 0.491228
thiC thiC proteinchromosome CDS553068 2046 - 0.518084
thiD phosphomethylpyrimidine kinasechromosome CDS1523104 801 + 0.556804
thiE thiE proteinchromosome CDS552407 690 - 0.534783
thiF thiF proteinchromosome CDS551620 798 - 0.5401
thiG thiG proteinchromosome CDS550591 1002 - 0.53493
thiH thiH proteinchromosome CDS549468 1146 - 0.501745
thiL thiamin-monophosphate kinasechromosome CDS1131804 990 + 0.489899
thiQ putative ATP-binding component of a transport systemchromosome CDS4054157 732 + 0.543716
trpE anthranilate synthase component Ichromosome CDS2258835 1566 - 0.505109
ubiA 4-hydroxybenzoate-octaprenyltransferasechromosome CDS643500 867 + 0.484429
ubiB ferrisiderophore reductasechromosome CDS512625 744 + 0.486559
ubiC chorismate lyasechromosome CDS642768 567 + 0.516755
ubiE COQ5 methyltransferasechromosome CDS501495 756 + 0.448413
ubiG 3-demethylubiquinone-9 3-methyltransferasechromosome CDS3277275 729 + 0.499314
ubiH 2-octaprenyl-6-methoxyphynol hydroxylasechromosome CDS3628053 1179 - 0.550466
ubiX 3-octaprenyl-4-hydroxybenzoate carboxy-lyasechromosome CDS1775799 588 + 0.467687
visC hypothetical proteinchromosome CDS3626660 1437 - 0.537926
y0055 hypotheticalchromosome CDS67548 714 + 0.540616
y0461 putative oxidoreductasechromosome CDS511092 1521 + 0.487837
y0547 hypotheticalchromosome CDS613493 1314 - 0.509893
y0554 hypotheticalchromosome CDS621131 1062 - 0.490584
y0666 hypothetical proteinchromosome CDS751439 264 - 0.409091
y0757 putative DNA repair proteinchromosome CDS843371 621 - 0.470209
y0817 putative 6-pyruvoyl tetrahydrobiopterin synthasechromosome CDS916079 366 - 0.469945
y0957 hypothetical proteinchromosome CDS1077906 1083 + 0.481994
y1072 putative O-antigen synthesis protein, WbyHchromosome CDS1207504 1284 + 0.352804
y1181 hypothetical proteinchromosome CDS1324724 693 - 0.484848
y1196 hypothetical proteinchromosome CDS1340586 1182 + 0.534687
y1651 hypotheticalchromosome CDS1824719 951 + 0.480547
y2111 hypothetical proteinchromosome CDS2328250 693 + 0.434343
y2330 hypotheticalchromosome CDS2566128 1110 - 0.526126
y2336 hypotheticalchromosome CDS2570885 1971 + 0.468798
y2837 putative ABC transport proteinchromosome CDS3139448 786 - 0.521628
y2896 putative dehydrogenasechromosome CDS3200770 966 + 0.600414
y3093 putative permeasechromosome CDS3403208 1359 + 0.491538
y3158 putative enzymechromosome CDS3469308 828 - 0.4843
y3270 hypotheticalchromosome CDS3599766 282 + 0.507092
y3300 putative ligasechromosome CDS3632309 597 + 0.517588
y3332 putative oxidasechromosome CDS3664225 1143 + 0.492563
y3402 hypotheticalchromosome CDS3765258 1485 + 0.482828
y3531 putative kinasechromosome CDS3916409 363 - 0.501377
y4096 putative dehydrogenasechromosome CDS4544627 1017 + 0.508358
ybtS anthranilate synthasechromosome CDS2647129 1305 - 0.55249
yiuC ATP-binding protein of iron/siderophore ABC transporterchromosome CDS3171988 789 - 0.504436
ysuD putative ATP-binding component for iron transport systemchromosome CDS2904022 849 + 0.485277